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Summary Attributions Wiki
XB-GRNA-25900336
gRNA Name: pcdh1 gRNA1
Synonyms: Xt.pcdh1 gRNA
Genomic Target: pcdh1

Sequence: 5' GGGGCACCCTTACTTGCGTG 3'



Genomic Target tropicalis laevis.S
Identities 20/20 20/20
genome
gRNA
 
5' CACGCAAGTAAGGGTGCCCC 3'
   ||||||||||||||||||||
3' GTGCGTTCATTCCCACGGGG 5'
 
5' CACGCAAGTAAGGGTGCCCC 3'
   ||||||||||||||||||||
3' GTGCGTTCATTCCCACGGGG 5'
     
Genomic Alignments Position Identity Strand Target Genomic Target
laevis 10.1 Chr3S:117248260..117248279 20/20 Antisense target pcdh1.S
Chr9_10L:50605990..50606009 17/20 Sense off-target shisa6.L
Chr3L:34468708..34468727 16/20 Sense off-target stard15.L
Chr4L:107163426..107163445 18/20 Sense unknown
tropicalis 10.0 Chr3:30028118..30028137 20/20 Sense target pcdh1
Chr3:130121236..130121255 18/20 Antisense off-target rhobtb2
Chr9:54504794..54504813 17/20 Sense off-target map3k13
Chr3:98796603..98796622 17/20 Antisense unknown
Publications
???morpholino.displaySummary.papersFirst??? Identification and validation of candidate risk genes in endocytic vesicular trafficking associated with esophageal atresia and tracheoesophageal fistulas., HGG Adv 2022     
???morpholino.displaySummary.papersRecent??? Disrupted endosomal trafficking of the Vangl-Celsr polarity complex underlies congenital anomalies in Xenopus trachea-esophageal morphogenesis., Dev Cell 2025     
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