Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.
Echinobase
Summary Attributions Wiki
ECB-MORPHOLINO-26395816
Morpholino Name: neurod1 MO1
Synonyms: NeuroD1 MASO
Target mRNA: neurod1

Morpholino Type: translation blocking morpholino (5' UTR)
Sequence: 5' AGTTCCTTTTTTATGACGTT 3'

Source: Gene Tools LLC


Target mRNA S. purpuratus A. planci P. miniata L. variegatus
Identities 20/20
genomic

MO		 5' AACGTCATAAAAAAGGAACT 3' |||||||||||||||||||| 3' TTGCAGTATTTTTTCCTTGA 5'
Genomic Alignments Position Identity Strand Target Target mRNA
S. purpuratus 5.0 NW_022145604.1:26635084..26635103 20/20 1 Antisense target neurod1
NW_022145611.1:2737496..2737515 18/20 2 Antisense off-target ush2a
NW_022145596.1:17968643..17968662 16/20 3 Antisense off-target dhrsx
NW_022145603.1:2937739..2937758 18/20 4 Antisense off-target LOC588387
NW_022145615.1:17786352..17786371 18/20 5 Sense off-target LOC593709
NW_022145596.1:3353140..3353159 17/20 6 Antisense off-target TRNAN-GUU
NW_022145596.1:5687114..5687133 17/20 7 Antisense off-target TRNAN-GUU
NW_022145613.1:771059..771078 17/20 8 Antisense off-target LOC577291
NW_022145601.1:12732935..12732954 16/20 9 Antisense off-target LOC755749
NW_022145601.1:13243564..13243583 16/20 10 Antisense off-target LOC752669
NW_022145607.1:28510660..28510679 16/20 11 Sense off-target LOC754172
NW_022145612.1:2492434..2492453 16/20 12 Sense off-target LOC579955
NW_022145601.1:20647045..20647064 18/20 13 Antisense off-target LOC105441379
NW_022145520.1:177448..177467 17/20 14 Sense off-target LOC115921605
NW_022145462.1:29269..29288 16/20 15 Antisense off-target LOC105441119
NW_022145597.1:15040784..15040803 16/20 16 Antisense off-target LOC115918513
NW_022145597.1:15190711..15190730 16/20 17 Antisense off-target LOC100891001
NW_022145610.1:21361602..21361621 16/20 18 Antisense off-target LOC115929324
NW_022145611.1:26920834..26920853 16/20 19 Antisense off-target LOC115929610
NW_022145594.1:7210429..7210448 18/20 20 unknown
NW_022145599.1:27562509..27562528 18/20 21 unknown
NW_022145539.1:1046967..1046986 17/20 22 unknown
NW_022145595.1:3660077..3660096 17/20 23 unknown
NW_022145600.1:26096970..26096989 17/20 24 unknown
NW_022145602.1:5182888..5182907 17/20 25 unknown
NW_022145610.1:15943923..15943942 17/20 26 unknown
NW_022145594.1:4152319..4152338 16/20 27 unknown
NW_022145596.1:25055980..25055999 16/20 28 unknown
NW_022145609.1:20229769..20229788 16/20 29 unknown
NW_022145609.1:24183024..24183043 16/20 30 unknown
NW_022145610.1:22917376..22917395 16/20 31 unknown
NW_022145611.1:16279408..16279427 16/20 32 unknown
P. miniata 3.0 NW_024037076.1:11020107..11020126 18/20 33 Sense off-target LOC119720470
NW_024037061.1:1393020..1393039 17/20 34 Sense off-target LOC119730480
NW_024037063.1:13971727..13971746 17/20 35 Sense off-target LOC119732373
NW_024037074.1:8030921..8030940 17/20 36 Sense off-target LOC119745482
NW_024037047.1:26111249..26111268 16/20 37 Sense off-target LOC119726801
NW_024037056.1:17731825..17731844 16/20 38 Sense off-target LOC119724976
NW_024037057.1:9455558..9455577 16/20 39 Sense off-target LOC119725692
NW_024037058.1:9660981..9661000 16/20 40 Antisense off-target LOC119726315
NW_024037063.1:20096137..20096156 16/20 41 Antisense off-target LOC119732167
NW_024037056.1:9053547..9053566 18/20 42 unknown
NW_024037059.1:37188250..37188269 18/20 43 unknown
NW_024037059.1:22971634..22971653 17/20 44 unknown
NW_024037072.1:18267483..18267502 17/20 45 unknown
NW_024037075.1:3729941..3729960 17/20 46 unknown
NW_024037056.1:17941092..17941111 16/20 47 unknown
NW_024037057.1:2230205..2230224 16/20 48 unknown
L. variegatus 3.0 chr3:35746589..35746608 16/20 49 Sense off-target emc3
chr5:30970314..30970333 16/20 50 Sense off-target ccdc171
chr1:69185620..69185639 18/20 51 Sense off-target LOC121421233
chr12:33365943..33365962 18/20 52 Sense off-target LOC121425461
chr16:20726534..20726553 18/20 53 Sense off-target LOC121430416
chr4:21272956..21272975 18/20 54 Sense off-target LOC121413613
chr3:10443156..10443175 17/20 55 Sense off-target LOC121410189
chr5:44369731..44369750 17/20 56 Sense off-target LOC121416247
chr5:45859276..45859295 17/20 57 Sense off-target LOC121416280
chr6:31381744..31381763 17/20 58 Antisense off-target LOC121417366
chr10:2991511..2991530 16/20 59 Antisense off-target LOC121422386
chr12:32030997..32031016 16/20 60 Antisense off-target LOC121424704
chr12:32031132..32031151 16/20 61 Antisense off-target LOC121424704
chr12:3655883..3655902 16/20 62 Sense off-target LOC121424835
chr13:21142850..21142869 16/20 63 Antisense off-target LOC121426318
chr16:17720203..17720222 16/20 64 Sense off-target LOC121429992
chr18:7974073..7974092 16/20 65 Sense off-target LOC121432017
chr19:21656078..21656097 16/20 66 Sense off-target LOC121405766
chr2:47024274..47024293 16/20 67 Sense off-target LOC121408180
chr2:62689600..62689619 16/20 68 Antisense off-target LOC121408581
chr4:17124403..17124422 16/20 69 Sense off-target LOC121412845
chr6:25234833..25234852 16/20 70 Antisense off-target LOC121417256
chr8:43086837..43086856 16/20 71 Antisense off-target LOC121419762
chr1:77669043..77669062 18/20 72 unknown
chr15:29490112..29490131 18/20 73 unknown
chr1:11886730..11886749 17/20 74 unknown
chr1:33341990..33342009 17/20 75 unknown
chr1:79113410..79113429 17/20 76 unknown
chr16:9856568..9856587 17/20 77 unknown
chr19:12297736..12297755 17/20 78 unknown
chr2:21678743..21678762 17/20 79 unknown
chr2:28862652..28862671 17/20 80 unknown
chr4:22983653..22983672 17/20 81 unknown
chr4:25547208..25547227 17/20 82 unknown
chr9:10404915..10404934 17/20 83 unknown
chr9:14747518..14747537 17/20 84 unknown
chr9:17448711..17448730 17/20 85 unknown
chr1:1694349..1694368 16/20 86 unknown
chr10:9907146..9907165 16/20 87 unknown
chr12:30597288..30597307 16/20 88 unknown
chr16:16782181..16782200 16/20 89 unknown
chr16:3237174..3237193 16/20 90 unknown
chr2:74654147..74654166 16/20 91 unknown
chr4:32333045..32333064 16/20 92 unknown
chr5:19067252..19067271 16/20 93 unknown
chr5:29772641..29772660 16/20 94 unknown
chr6:25183904..25183923 16/20 95 unknown
chr6:4453050..4453069 16/20 96 unknown
chr6:8009446..8009465 16/20 97 unknown
chr7:22475689..22475708 16/20 98 unknown
Publications
First: NeuroD1 localizes to the presumptive ganglia and gut of the sea urchin larvae., MicroPubl Biol 2022  
Most recent:
View All Papers