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ECB-gRNA-26395100
gRNA Name:
LOC588806 gRNA21
Synonyms: SpPKS1 547
Genomic Target: LOC588806
Sequence: 5' GGTGAGGGGTTTGAGGACAA 3'
Synonyms: SpPKS1 547
Genomic Target: LOC588806
Sequence: 5' GGTGAGGGGTTTGAGGACAA 3'

Genomic Target | S. purpuratus | A. planci | P. miniata | L. variegatus | |||
Identities | 19/20 | ||||||
genomic gRNA |
5' TTGTCCTCAAACCCCTCAGC 3' |||||||||||||||||| | 3' AACAGGAGTTTGGGGAGTGG 5' | ||||||
Genomic Alignments ![]() |
Position | Identity | Strand | Target | Genomic Target | S. purpuratus 5.0 | NW_022145610.1:2716401..2716420 | 19/20 | 1 Antisense | target | LOC588806 |
NW_022145612.1:15987739..15987758 | 19/20 | 2 Antisense | off-target | LOC105439527 | |||
NW_022145614.1:25636822..25636841 | 16/20 | 3 Sense | off-target | LOC100889855 | |||
P. miniata 3.0 | NW_024037058.1:2801085..2801104 | 17/20 | 4 Antisense | off-target | drg1 | ||
NW_024037065.1:4821181..4821200 | 17/20 | 5 Antisense | off-target | LOC119733870 | |||
NW_024037053.1:568267..568286 | 16/20 | 6 Sense | off-target | LOC119722309 | |||
NW_024037059.1:28824587..28824606 | 16/20 | 7 Antisense | off-target | LOC119728508 | |||
NW_024037072.1:6629404..6629423 | 16/20 | 8 Sense | off-target | LOC119742120 | |||
XR_005271529.1:1191..1210 | 16/20 | 9 Sense | off-target | LOC119732247 | |||
XR_005271530.1:536..555 | 16/20 | 10 Sense | off-target | LOC119732247 | |||
XR_005271531.1:503..522 | 16/20 | 11 Sense | off-target | LOC119732247 | |||
XR_005271532.1:353..372 | 16/20 | 12 Sense | off-target | LOC119732247 | |||
XR_005271533.1:354..373 | 16/20 | 13 Sense | off-target | LOC119732247 | |||
XR_005271534.1:392..411 | 16/20 | 14 Sense | off-target | LOC119732247 | |||
XR_005271535.1:1145..1164 | 16/20 | 15 Sense | off-target | LOC119732247 | |||
XR_005271536.1:912..931 | 16/20 | 16 Sense | off-target | LOC119732247 | |||
XR_005271537.1:455..474 | 16/20 | 17 Sense | off-target | LOC119732247 | |||
XR_005271538.1:309..328 | 16/20 | 18 Sense | off-target | LOC119732247 | |||
XR_005271539.1:904..923 | 16/20 | 19 Sense | off-target | LOC119732247 | |||
XR_005271540.1:321..340 | 16/20 | 20 Sense | off-target | LOC119732247 | |||
XR_005271541.1:474..493 | 16/20 | 21 Sense | off-target | LOC119732247 | |||
XR_005271542.1:455..474 | 16/20 | 22 Sense | off-target | LOC119732247 | |||
XR_005271543.1:469..488 | 16/20 | 23 Sense | off-target | LOC119732247 | |||
XR_005271544.1:307..326 | 16/20 | 24 Sense | off-target | LOC119732247 | |||
XR_005271545.1:345..364 | 16/20 | 25 Sense | off-target | LOC119732247 | |||
NW_024037052.1:12976597..12976616 | 18/20 | 26 | unknown | ||||
NW_024037074.1:13702935..13702954 | 18/20 | 27 | unknown | ||||
NW_024037063.1:3401596..3401615 | 17/20 | 28 | unknown | ||||
NW_024037071.1:12210602..12210621 | 17/20 | 29 | unknown | ||||
NW_024037072.1:5113780..5113799 | 17/20 | 30 | unknown | ||||
NW_024037074.1:20570421..20570440 | 17/20 | 31 | unknown | ||||
L. variegatus 3.0 | chr12:29614147..29614166 | 18/20 | 32 Sense | off-target | LOC121425375 | ||
chr12:32200426..32200445 | 18/20 | 33 Sense | off-target | LOC121424943 | |||
chr9:5931373..5931392 | 18/20 | 34 Antisense | off-target | LOC121421003 | |||
chr16:13286978..13286997 | 17/20 | 35 | unknown | ||||
chr2:17980091..17980110 | 17/20 | 36 | unknown | ||||
chr14:19620009..19620028 | 16/20 | 37 | unknown | ||||
chr18:18398990..18399009 | 16/20 | 38 | unknown | ||||
chr6:15915435..15915454 | 16/20 | 39 | unknown | ||||
chr6:16890444..16890463 | 16/20 | 40 | unknown | ||||
Publications | |||||||
First: |
Optimizing CRISPR/Cas9-based gene manipulation in echinoderms., Dev Biol 2022 |
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Most recent: | |||||||
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