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Echinobase

Summary Attributions Wiki
ECB-GRNA-26395092
gRNA Name: LOC588806 gRNA15
Synonyms: Pks-sgRNA12
Genomic Target: LOC588806
Derived from:

Sequence: 5' GTACCATCCCACCAACCAT 3'



Genomic Target S. purpuratus
Identities 19/19
genome
gRNA
 
5' ATGGTTGGTGGGATGGTAC 3'
   |||||||||||||||||||
3' TACCAACCACCCTACCATG 5'
      
Genomic Alignments Position Identity Strand Genomic Target
S. purpuratus 5.0 NW_022145610.1:2716770..2716788 19/19 Sense LOC588806
NW_022144963.1:30344..30362 15/19
NW_022145594.1:27146307..27146325 15/19
NW_022145594.1:27184670..27184688 15/19
NW_022145605.1:34593970..34593988 15/19
P. miniata 3.0 NW_024037056.1:6137957..6137975 17/19 Sense LOC119725047
NW_024037073.1:13059474..13059492 16/19 Antisense LOC119743402
NW_024037059.1:27409860..27409878 15/19 Sense tpr
NW_024037047.1:3947866..3947884 15/19 Sense LOC119728318
NW_024037056.1:10774671..10774689 15/19 Antisense LOC119724571
NW_024037065.1:9200075..9200093 15/19 Antisense LOC119733938
NW_024037054.1:17476348..17476366 17/19
NW_024037054.1:17928829..17928847 17/19
NW_024037054.1:18030939..18030957 17/19
NW_024037055.1:43027..43045 17/19
NW_024037063.1:11390619..11390637 17/19
NW_024037049.1:1648309..1648327 16/19
NW_024037066.1:5166671..5166689 16/19
NW_024037072.1:7618524..7618542 16/19
NW_024037075.1:3435506..3435524 15/19
L. variegatus 3.0 chr1:69170486..69170504 17/19 Sense LOC121421218
chr1:21320333..21320351 16/19 Antisense spart
chr3:24618587..24618605 16/19 Antisense LOC121410583
chr3:26839961..26839979 16/19 Antisense LOC121410650
chr5:45116463..45116481 16/19 Antisense LOC121416267
chr5:46515863..46515881 16/19 Antisense LOC121416298
chr16:8110855..8110873 17/19
chr5:46648067..46648085 16/19
chr3:11746842..11746860 15/19
Publications
???morpholino.displaySummary.papersFirst??? Single nucleotide editing without DNA cleavage using CRISPR/Cas9-deaminase in the sea urchin embryo., Dev Dyn 2017  
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