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Echinobase
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ECB-MORPHOLINO-24506432

Morpholino Name: ccnb2 MO3
Synonyms: cyclin B1 MO
Target mRNA: ccnb2

Morpholino Type: translation blocking morpholino
Sequence: 5' AAAACTTTAAAAAGTTTATTTGAAT 3'

Source: Gene Tools LLC


Target mRNA S. purpuratus A. planci P. miniata L. variegatus
Identities
genomic

MO
Genomic Alignments Position Identity Strand Target Target mRNA
S. purpuratus 5.0 NW_022145613.1:460096..460120 21/25 1 Antisense off-target Sdc
NW_022145601.1:23338552..23338576 21/25 2 Antisense off-target hspg2
NW_022145607.1:19769059..19769083 21/25 3 Antisense off-target sf3a3
NW_022145601.1:2933915..2933939 21/25 4 Antisense off-target clcn2
NW_022145604.1:20940675..20940699 21/25 5 Antisense off-target med16
NW_022145612.1:27068425..27068449 21/25 6 Sense off-target dnah6
NW_022145525.1:347329..347353 21/25 7 Sense off-target LOC373274
NW_022145609.1:28376925..28376949 21/25 8 Sense off-target LOC753250
NW_022145612.1:9873715..9873739 21/25 9 Sense off-target LOC574572
NW_022145614.1:5335025..5335049 21/25 10 Sense off-target LOC590618
NW_022145615.1:5488802..5488826 21/25 11 Antisense off-target LOC581935
NW_022145604.1:14582917..14582941 21/25 12 Antisense off-target LOC115918781
NW_022145611.1:38490738..38490762 21/25 13 Antisense off-target LOC105439525
NW_022145611.1:40737204..40737228 21/25 14 Antisense off-target LOC115929701
NW_022145611.1:43628493..43628517 21/25 15 Antisense off-target LOC100891430
NW_022145613.1:38938912..38938936 21/25 16 Antisense off-target LOC115918346
NW_022145613.1:39070022..39070046 21/25 17 Antisense off-target LOC100891289
NW_022145614.1:32540558..32540582 21/25 18 Antisense off-target LOC105437505
NW_022145614.1:33049207..33049231 21/25 19 Antisense off-target LOC105444112
NW_022145615.1:16319593..16319617 21/25 20 Sense off-target LOC105446079
NW_022145600.1:34013279..34013303 22/25 21 unknown
NW_022145601.1:16635131..16635155 22/25 22 unknown
NW_022145605.1:15944513..15944537 22/25 23 unknown
NW_022145594.1:13875347..13875371 21/25 24 unknown
NW_022145596.1:19076274..19076298 21/25 25 unknown
NW_022145609.1:18633926..18633950 21/25 26 unknown
NW_022145602.1:1133305..1133329 21/25 27 unknown
NW_022145603.1:25817570..25817594 21/25 28 unknown
NW_022145612.1:58285961..58285985 21/25 29 unknown
NW_022145610.1:6350327..6350351 21/25 30 unknown
NW_022145611.1:22037225..22037249 21/25 31 unknown
P. miniata 3.0 NW_024037059.1:19793902..19793926 21/25 32 Sense off-target pfas
NW_024037065.1:9406986..9407010 21/25 33 Antisense off-target c2cd3
NW_024037071.1:5609692..5609716 21/25 34 Sense off-target pdcd4
NW_024037059.1:29002067..29002091 22/25 35 Antisense off-target washc5
NW_024037069.1:5791925..5791949 23/25 36 Antisense off-target LOC119737135
NW_024037055.1:1011111..1011135 22/25 37 Sense off-target LOC119723321
NW_024037072.1:39630882..39630906 22/25 38 Antisense off-target LOC119740416
NW_024037074.1:25356702..25356726 22/25 39 Antisense off-target LOC119745404
NW_024037076.1:10778016..10778040 21/25 40 Sense off-target LOC119720403
NW_024037076.1:2496162..2496186 21/25 41 Antisense off-target LOC119720552
NW_024037059.1:25576261..25576285 21/25 42 Antisense off-target LOC119727935
NW_024037063.1:15319260..15319284 21/25 43 Antisense off-target LOC119732147
NW_024037068.1:6056288..6056312 21/25 44 Antisense off-target LOC119736109
NW_024037059.1:33830639..33830663 21/25 45 Antisense off-target LOC119728050
NW_024037059.1:9533123..9533147 21/25 46 Sense off-target LOC119727347
NW_024037073.1:8803889..8803913 21/25 47 Antisense off-target LOC119742611
NW_024037075.1:1161531..1161555 21/25 48 Antisense off-target LOC119719101
NW_024037072.1:23484172..23484196 23/25 49 unknown
NW_024037047.1:21476544..21476568 21/25 50 unknown
NW_024037047.1:2471135..2471159 21/25 51 unknown
NW_024037055.1:1372322..1372346 21/25 52 unknown
NW_024037059.1:20017847..20017871 21/25 53 unknown
NW_024037059.1:22229624..22229648 21/25 54 unknown
NW_024037064.1:3542846..3542870 21/25 55 unknown
NW_024037064.1:5202889..5202913 21/25 56 unknown
NW_024037066.1:5834391..5834415 21/25 57 unknown
NW_024037067.1:8341696..8341720 21/25 58 unknown
NW_024037068.1:17204685..17204709 21/25 59 unknown
NW_024037069.1:34862635..34862659 21/25 60 unknown
NW_024037071.1:12019449..12019473 21/25 61 unknown
NW_024037060.1:7258258..7258282 21/25 62 unknown
NW_024037062.1:6311019..6311043 21/25 63 unknown
NW_024037062.1:6546965..6546989 21/25 64 unknown
NW_024037062.1:6582750..6582774 21/25 65 unknown
NW_024037073.1:6040033..6040057 21/25 66 unknown
NW_024037074.1:20244024..20244048 21/25 67 unknown
NW_024037074.1:34630247..34630271 21/25 68 unknown
L. variegatus 3.0 chr16:5917694..5917718 21/25 69 Antisense off-target alg9
chr7:29323156..29323180 21/25 70 Antisense off-target ap5m1
chr2:27010174..27010198 22/25 71 Sense off-target LOC121407720
chr4:6572748..6572772 22/25 72 Sense off-target LOC121413261
chr4:6931889..6931913 22/25 73 Sense off-target LOC121413273
chr1:70573639..70573663 21/25 74 Antisense off-target LOC121421661
chr11:19984271..19984295 21/25 75 Sense off-target LOC121424348
chr11:9353761..9353785 21/25 76 Sense off-target LOC121423936
chr12:33327118..33327142 21/25 77 Antisense off-target LOC121425709
chr14:28137529..28137553 21/25 78 Antisense off-target LOC121427498
chr14:28137529..28137553 21/25 79 Sense off-target LOC121427499
chr14:8949848..8949872 21/25 80 Sense off-target LOC121428054
chr16:7248876..7248900 21/25 81 Sense off-target LOC121430358
chr16:7250525..7250549 21/25 82 Sense off-target LOC121430358
chr16:7252647..7252671 21/25 83 Sense off-target LOC121430358
chr16:7253725..7253749 21/25 84 Sense off-target LOC121430358
chr16:7254803..7254827 21/25 85 Sense off-target LOC121430358
chr17:20235326..20235350 21/25 86 Sense off-target LOC121431036
chr19:1284235..1284259 21/25 87 Sense off-target LOC121406057
chr19:18453758..18453782 21/25 88 Antisense off-target LOC121405915
chr2:3192336..3192360 21/25 89 Antisense off-target LOC121407076
chr2:50650963..50650987 21/25 90 Antisense off-target LOC121408293
chr3:13232614..13232638 21/25 91 Sense off-target LOC121410259
chr3:19161989..19162013 21/25 92 Antisense off-target LOC121410415
chr3:41041335..41041359 21/25 93 Sense off-target LOC121411034
chr3:43887088..43887112 21/25 94 Antisense off-target LOC121411112
chr3:55041370..55041394 21/25 95 Antisense off-target LOC121411403
chr4:16952115..16952139 21/25 96 Sense off-target LOC121413506
chr4:19906412..19906436 21/25 97 Sense off-target LOC121413570
chr4:28032079..28032103 21/25 98 Sense off-target LOC121413755
chr4:51120728..51120752 21/25 99 Sense off-target LOC121414262
chr5:16148518..16148542 21/25 100 Sense off-target LOC121415569
chr5:38590100..38590124 21/25 101 Antisense off-target LOC121416098
chr5:44606713..44606737 21/25 102 Antisense off-target LOC121416256
chr5:5052961..5052985 21/25 103 Antisense off-target LOC121414729
chr6:21692400..21692424 21/25 104 Sense off-target LOC121417198
chr6:25871061..25871085 21/25 105 Antisense off-target LOC121417269
chr6:28129244..28129268 21/25 106 Antisense off-target LOC121417316
chr9:4523150..4523174 21/25 107 Antisense off-target LOC121422159
chr11:2983332..2983356 21/25 108 unknown
chr12:35691527..35691551 21/25 109 unknown
chr14:16101798..16101822 21/25 110 unknown
chr14:7349823..7349847 21/25 111 unknown
chr15:27798539..27798563 21/25 112 unknown
chr16:4422408..4422432 21/25 113 unknown
chr17:20028731..20028755 21/25 114 unknown
chr18:12192115..12192139 21/25 115 unknown
chr18:14347479..14347503 21/25 116 unknown
chr18:20174680..20174704 21/25 117 unknown
chr3:43459506..43459530 21/25 118 unknown
chr6:1292064..1292088 21/25 119 unknown
chr6:14038649..14038673 21/25 120 unknown
chr6:28678452..28678476 21/25 121 unknown
chr7:35149227..35149251 21/25 122 unknown
chr8:15721612..15721636 21/25 123 unknown
chr8:2850531..2850555 21/25 124 unknown
chr8:4001080..4001104 21/25 125 unknown
Publications
First: Antisense morpholino targeting just upstream from a poly(A) tail junction of maternal mRNA removes the tail and inhibits translation., Nucleic Acids Res 2012              
Most recent:
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