- Click on any colour tile in the legend to toggle visibility of that feature on/off
- The radius of the central plot represents the length of the longest scaffold in the assembly
- The angle subtended by the first (red) segment within this plot indicates the percentage of the assembly that is in the longest scaffold
- The radial axis originates at the circumference and indicates scaffold length, this is on a square-root scale
- Subsequent (grey) segments are plotted from the circumference and the length of segment at a given percentage indicates the cumulative percentage of the assembly that is contained within scaffolds of at least that length
- The N50 and N90 scaffold lengths are indicated respectively by dark and light orange arcs that connect to the radial axis for ease of comparison
- The cumulative number of scaffolds within a given percentage of the genome is plotted in purple originating at the centre of the plot
- White scale lines are drawn at successive orders of magnitude from 10 scaffolds onwards
- The fill colour of the circumferential axis indicates the percentage base composition of the assembly: AT = light blue; GC = dark blue; N = grey
- Contig length (off by default) is indicated by darker grey segments overlaying the scaffold length plot
- Contig count (off by default) may be toggled on to be shown in place of the scaffold count plot
- Partial and complete BUSCO values are shown in light and dark green, respectively in the smaller plot in the upper right corner
About P. miniataP. miniata reproduces by broadcast spawning and gravid individuals can be collected throughout the year in California and maintained in laboratory aquariums for studies of embryo development. A high quality genome enables comparative genomics studies of evolution and development.
Larvae and adults possess whole body regeneration capability making them a model for studies of regeneration.
Egg Size: 169 um Spawning: broadcast Developmental pattern: planktotroph Larval types: bipinnaria and brachiolaria Reference: PubMed:21672739