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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041612219.1 PREDICTED: Lytechinus variegatus endoribonuclease Dicer-like (LOC121418382), transcript variant X1, mRNA ACAAGTTATTTTGCCATTTGGCTATTCACCACCATCGTACATCACCTTTCCACTGCGCTAGAAAAATCTG AACAATTTTCAGAAACAGAGCCTACATTTTGTCTAATTTCTCGGGTATCGATTTGTGACATTGAGATTAA GCAAGAATGGAAGAGCCATCACCGCTTTCACTGGGGTTAGAGGTCATAGATGCGGAGACTCCAGGTAGCT GCTTTGTCACCTCACAGAAGGAGTTTACCCCTATACTCAGCTTCACTCCTAGACAATATCAGCTTGAACT ACTTGAAACGGCTCTGGAGCAGAACACGGTAGTATACCTGCAGTCTGGGACAGAGAAGACATTCTTGGCA GTGATGCTCATCAAGGAACTCTCATGGTCAGTGAGGATGCCTGTCAAGGATGGAGGGAAAAGATCCATCT TCCTGGTCAATTCAGAATCTTATCTGTCAAAATGTGGCAACGTAATCCGCACCCACACCGATTTAGATGT CAAGGAATACAGGAACCGGGAAGAAATGAGTTCATGGGACAAAACAAAATGGCAGGATGAAATCGAACAT TGTCACGTTGCGGTGATGGACAGCGATATCTTCCTCAAGCTCTTACAGATGTCCTTTGTTGACTTGTCCA TGTTCAATCTGCTCATTCTGGATGAGTTTCATCACACCCTGAACTACCTCCATCCCTACCATCATGTCAT GCTCACATTGAGAACTTGTCTTCGGGAAGATTGCCCCAGGATTTTGGGATTATCTGAATCGGTTCTGAAG ACGGACTTCAAGCCAGTGGCTTTAGAGAAGCAGATCGAGTTAATAGAGGAAAATCTTAAGTGCAAAGCGA AAATCGCAACTAATTTGACCAGTATTAGCAAATATGGCACCAAGCCCAAAGAAGCAGTCATCCTCTGTCG GAAGTATGGGGACTGCGTTGAGTTGGTGTCCAAGCTATCGCAGCTCCTCACAGACAGTCTGGAACAGCTA AACCAGTTTGAATACTCTTTCAAAGCCAAGGACTTCGATGGGGAGCTTGTAGACTGTAATCGGGATCCTG TACTGCCAGCCAAGCAAGCCCTTACAGAATGCCTGTCAGCCCTGATGACGATAGGCCCTCTAGGGGTCAA GATCCTAATCCCGATGTTAGTCCGAGAGCTCCTGAAGCTCGAGAGGCATGAGTTCCTTGACGTTCACCTT CTCTTCCTGCAGCACGCAGTGACTCAGCTGAGGATGGTTGAAAGGATATGTGACAATGCTCTCAGAGAAG GAGGCAACTTTTATAACCTGAAGTTCCTGACTCCTAGAGTCAGGAGGCTGTTGGAAATTTTGGCTGAGTT CAAACCCAAGGAGGCCAGTCCAGAGGAGAAAGCTCAGCAGAGCGCTAGCCGGGAAAGGACCAACAAATAT GCATCACGTAGGAAAGCATTTAGATCTCATAAGGACATGAAAAATCCTAGATGGAAACCCGTTGTCCCGG AAGACCAAGACGAGGACGAAGTGAGTGATGAGGAAGAAGAAGAGGAGGAAGACGGACCCAATGCCGATAT CCAGCAAACCGGTCGCTCCACCACCAACCTCTGCGGTATCATCTTCGTGGAGCATCGTTACACGGCGGCG GTGATGAGCAGGCTCTTCAAGAAACTCTCCAAGAGAGATCCAAGGCTGCACTTTCTCCTCTGCAGCTGCA TTGCCATTGGCAGCGGGAGGCTTGGGGTGGCGAAGAAGTCGGCTGTGCAGGCTCAGAATCAAAGGAGAAA GAATGAAGAAGTGTTGAGGAAATTCAGGAGGAGAGAAGTCAATGTCTTAGTTGCTACCAGCTCTGTGGAA GATGGTGTTGAGCTTCCCCGTTGCAATGGCTGCAACCTCGTGGTGCGGTTCGATCGACCTACCAGCTACC AGTCTTACATGCAATCCAAGGCCAAGGCTAGGGCACCTACATCCCACTTTCTCATGCTCATAGATGAACC GGATGTACCACCATTCCTCAAAGACGTGCAGAGCTACCAGGAGTTTGAAAGGGTTCTGAATAGGAAGAGT AGATCTAAGGTTCAGCAAAAAGAAGAGGAAGTTGATCTTCTTTTAGCTGACCAGCAGATGCCTGCCTATG TCCCCAAGAATGAGGAAGGTTCTCCCAGGGCCTCGATGACCACTGCTATCCAGATTATTAACAGATACTG TGCCAAGCTACCTAGTGATGTGTTCACCCATCTTACTGCTTCCTGTAAGATAGAGGAGAGGAAAGGTGAA GTAACCCCTGAGTTCCAGGCCACTCTTCAGTTACCTATCAATTCACCCATCAGGGAGCCCATTACAGGTC AGTGGATGAAGCGTAAGAAATGGGCCAACATGGCGGTGGCTGTTAAAACTGCCGAGATTCTACATAAAGC AGGACAACTGAATGACTTCCTGCAGCCAATCGGGAAGGAATCGGTCTTGAAGGCCACGGAAAATGCTTTC AATCATCTCTTTGCTGAAGGTCAGACACGTCCAGGAACAACTAAGAAGAGACAGTACTATGATAAAGAGG TAGCGAAGTGCCTCCAAGGATGCCTTCCAATGCCAGATGAACCTTGCTACCTGTACAGTATTGACATGTC CCTGGCCTCACCTCTACCAGATATCCTCAACATACGAGAGAGGAAACTCCACAGACCAGAGGAAACACAC CAGTGCTTCGGTATTCTCACCTCAAAGCAAATACCAAAGGTGCCTGGTTTTCCAGTCTATACCAGGGCAG GAGAGTTGGCTGTGACCATCAAGCTTCAGTCAGATGCGATACGACTGAGTGGTAATCAGATCAGGAGAGC CCAGTCCTTTCACGGCTGCATGTTCTCAGAAGTGCTACGGCTTGACAAACCTAACCTAGAGCTGAACCCG GGGAAGAGTCAAGCTAATTACCTCATTGTGCCTCTCAAAGAAGCAGGTCCTAATAGTGGCCCTTCTGTCA TTGACTGGTCATTTCTTGAGGAGGTCAGCCTGAGTTCTGGTCATCTTGACCAACCCCCTCAACTTCCGGA TTACAGCCAGAGCCAGTTTGAGTTCTCCACGGATATCCTCGCAGACGCCGTGGTCACGCCAATCTACAGG AACATCGACCAACCCCAGCGTTACTTTGTGGCAGATATCCTCTATGACCTACCCGTGACCAGTCCTTTCC CGTCTGAAAAATATGAGACATTCGTGGACTACTACTTTGAGCGGTACGACATCCAGATATCCAACTTCCA GCAGCCGTTGGTAGACGTCGACTGCATGTCATCCAGACTGAATCTGTTGACTCCAAGGTATCTGAACCAC AAGGGGAAAGCATTGCCGATCAGCACAGGTCAAAACAAAAAGGGGAACCTGCAGAAGAAGCAGTACCTGG TCCCCGAGCTCTGCTACATCTATCCCATACCTGCATCCTTGTGGAGGAAAGCAGTGTGTCTTCCATCCAT CCTCTACAGATTGAATGCGCTGCTGATTGCAGAGGAACTCAGGGTACAGGTGGCCGAGGAGGCTGGCATT GGCCTGAAGAAGCTCCCAGAGGAATATCCCTACCCGAACCTGAGCTTTGGATGGGAAGGACTTGACCTTG AGGCACTCGAGAGGCAAGAGAAAGAGGCCAAAGAAGCAGCAAGATGCGATCATGATGAAGGAAATGCAAT ATATGTTGAACCAAAGTGCAATAACAATAAGCAGCTGAAAGAGTATGAACGTGCAGCTGAGTCTGAACTG CAGACAAGCGAGATTAAGGATGTTGAAATGAATGAGCAGCTGAACACACCATGTGACCAAAGTAGACTAG AACGTTGTAGGAGAGATGGTAATTTGAACAGTACTAATGAGAATAAAGACACATTTGATGATGAGAACTT TCACCTTGATGATGACGGCTATGACCCACAGATGTGCCTTGGACCTAGCCCTACTATTATTTTGCAGTCT TTGACCATGTCCAATTCCAGCGATGGTTTCAACCTGGAGAGGCTTGAGATGCTTGGAGACTCCTTCCTGA AACAGGCAGTGACTGTCTATCTCTACTGCACCTACCCTCAGTTAGATGAGGGTAAGCTATCATTCCTCAG GAGCAAGCAGGTTAGCAATTTCAACCTGTACTGCCTGGGTGAGAAGAAAAAGTTAGCTCATAAGATGCAG GTATCACTGTTTGATCCTTCCATCAACTGGCTTCCTCCCTGTTTGCTTGTCAAGGAGAGCTCCAAACCAG TCATCAAGGAAGAGAATGAAACTGACCAGGATGCAGGATTTGTCATTGACACCTGGGATCCTTCCACCGT TGAAGGTATTGACGACTTCGACGATGATGACTTCGACAGCGACCAGGGCTGGGAGGAGAATAGTGATGAT TTTTCAGAAGAGGAGATCGACGAGACGAAGGCAGAATGTCCGGACGATTTCTTTGCCAGGGAAGAGAAGG ACGAGGAGCAGTGGTCTTTCTCTGTGGGAGATCCTGACGATGTTCCGGGGTTGACCTACACCGGTGCCAA GACGCAGGATGTGGGAAGTGTTCCTCCTCTGCCGTACGAGATCCACACCCAACACAGCATGTCCGACAAG AGCATCGCGGACTGCGTCGAGGCCTTGATCGGTTGCTACCTGATGTCTTGCGGCTTCCGTAGCGCCCTTC TCTTGATGGCCTGGATGGGGTTGGATGTCCTTCCAACCATGGAAGGCCACTATAAGAAGCAGGATGACCA ATCATCTAACCATTCGTCAAACCCTTCAGCTGATCTTCCAGTGTCTTGCCGATATGGCTACCTGAAGCAA CCAGAGTCCCCTCTCTCCAGGAATGTGCCCAATGCAAAGAAAGTACTCAAGGAGCAACTTGTTGGATATG AGCACTTTGAGAAGACCATCAACTATCGCTTCAAGGATAGGGCTTACCTGCTCCAGGCCTTTACTCATTC ATCTTACCATCGTAATAGCATTACAGATTGCTATCAGAGGCTTGAGTTTCTTGGAGATGCCTTGTTGGAC TACCTCATCACTCGTCACCTGTACGATCACCACACCAACCTCTCTCCAGGGGCGCTGACCGATCTCCGCT CGGCACTGGTCAACAACACCATCTTTGCTTCCTTGGCCGTCAAGTTCAACTTCCATAAATACTTCAAGGC CTACACTGCCAACATGTTCCAAGTCATTGACAACTTTGTGACATTTGTCGATGCAAAGAATGAAGCTTTG GGAATGGATTCGCAGCTGAAGTACAGTGATGGAGAAGAGGACGAGTCCGAAGATATTGAAGTCCCTAAAG CTCTTGGTGACATCTTTGAATCTGTCGCCGGTGCAATCTACCTTGACAGTGGTATGTCACTCAATGCCGT CTGGAAGGTCTACTATCCGATGATGAAGCAACAGATTGAACAATATGCCTCGGATCTGCCAATCTCTCCT GTCCGAGAACTGTTGGAGATGGAGCCAGAAACGGCACGATTTGGGCCACCAGAGAAGACCATCGATGGAA AGACGAGGGTCACCGTCAACGTGGTTGGTAAGGGACAGTTCAAGGGGATTGGGCGGAACTATCACATCGC CAAGGCAACGGCGGCTCGTTTCGCCCTACGCCATCTGAAGAGCCATCCTCAGAAGTGAAAGTAAGACTCA ACGTACTGAAAGAAATTCTGAAAAACATTACAATACCGCTATCCTTTGGTGAGGCATTGATTTACATATG CCACTTTTCACCCAAGTGAGTGAATGGTATCTTGTAGGATGGGAACATCTATGTGGTTTCCTCAGCACTG TATCAAAATGATAACAAATTGGAATGTTCACCAGGGAGTGGAGAATGCAAGTGCATTCAGTGTGGGCAGA TCTAAGTTTCATGACTTGGCTAGTGATATCTCTTTGTGAAGTGAAAAGACAAAATGCTATTACACTGATC TATTGGATCATTAAAATTTGCATTATTTTGAAATGCTAACTGTATGCCTCATGTTTGTATACATAATAAT GCAATGTTCCAGGCCTGAGTAATGGTATGGGTGAAGATTAATTATTTTCTCTTGGAAAGGGATTGATAAT TTAATATGATTTAATACCTTTCTCCATCCCATACTATCACAGTGTCCTTTGATTTCATAAAATGAATTAA TGCAGTCAGGTGTTGATGGAATGATTATGTGGAGTACTTTGGATCTGTTATATAAAGTCTTTCAGATCTT TAAGATGTTCACGCCTGGTATTAAAAAAAATACTTCATCTTTTTAAAAGAAATTTGACCAAAAAATCATG CTACGACACTGGTTTAAACTTCACTGCCAGCTCAATCAGTTATAGTTGTGATTGGGTTGCATGTGTATGG TGAAGGGATGCTTGAGAATAGGTGATTTCAAGTACAGTGTTGGCGTTGGTGTTGGAATTTGGATTGCTTT CCCTAGCTCCAAAACCTATTCTGAGTTTGTAAAACATCCAGATCACATCAGTGACATCTCAACAACTAGT GAGTGACTTTTCAGGACCATCTTCGTTTTATGTTTGGTGTGATACTGTACCAGCTGAAATTTTCGCATAC AGATATTTTCGCGAATCGCTACCTATCAGACATTTTCGCGTGTTGTTAATTTCGCGCTTGAAAGTCACCC AGTCAGTGCCTATACGATCACTCTCACGTACAGCAATCCAGTCATCCCATATCTATGCACAAGTCTAAGC CTAAAATAACTTGCTGAAAATTTTTCCGAAGGAAAATACCATTAAACTTAAAAATTATACCTTCCTTT
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???blast.matrix.pam30???
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Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds