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ECB-GRNA-26398302
gRNA Name:
prdm1 gRNA3
Synonyms: Sp_BLIMP1_3
Genomic Target: prdm1
Derived from:
Sequence: 5' CTCGGTCATGTCAGACGGCA 3'
Synonyms: Sp_BLIMP1_3
Genomic Target: prdm1
Derived from:
Sequence: 5' CTCGGTCATGTCAGACGGCA 3'
| Genomic Target | S. purpuratus | ||||||
| Identities | 20/20 | ||||||
genome
gRNA
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5' TGCCGTCTGACATGACCGAG 3' |||||||||||||||||||| 3' ACGGCAGACTGTACTGGCTC 5' |
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Genomic Alignments  |
Position | Identity | Strand | Target | Genomic Target | S. purpuratus 5.0 | NW_022145607.1:33442144..33442163 | 20/20 | Antisense | target | prdm1 |
| NW_022145607.1:290..309 | 20/20 | off-target | blimp1/krox | ||||
| NW_022145613.1:11060259..11060278 | 16/20 | Sense | off-target | drc1 | |||
| P. miniata 3.0 | NW_024037075.1:11350580..11350599 | 18/20 | Sense | off-target | LOC119719171 | ||
| NW_024037064.1:10162700..10162719 | 17/20 | Sense | off-target | LOC119733343 | |||
| NW_024037074.1:12411714..12411733 | 16/20 | Antisense | off-target | LOC119746118 | |||
| NW_024037064.1:9933519..9933538 | 17/20 | Sense | unknown | ||||
| L. variegatus 3.0 | chr4:43875921..43875940 | 18/20 | Antisense | off-target | LOC121412703 | ||
| chr11:33091260..33091279 | 18/20 | Antisense | off-target | LOC121424502 | |||
| Publications | |||||||
| ???morpholino.displaySummary.papersFirst??? |
mRNA splicing variants of the transcription factor Blimp1 differentially regulate germline genes in echinoderms., Dev Biol 2025 |
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| ???morpholino.displaySummary.papersRecent??? | |||||||
| ???morpholino.displaySummary.papersAll??? | |||||||