|
ECB-GRNA-26398301
gRNA Name:
prdm1 gRNA2
Synonyms: Sp_BLIMP1_2
Genomic Target: prdm1
Derived from:
Sequence: 5' ACCCCATGGCCAGGCGGTGG 3'
Synonyms: Sp_BLIMP1_2
Genomic Target: prdm1
Derived from:
Sequence: 5' ACCCCATGGCCAGGCGGTGG 3'
| Genomic Target | S. purpuratus | ||||||
| Identities | 20/20 | ||||||
genome
gRNA
|
5' CCACCGCCTGGCCATGGGGT 3' |||||||||||||||||||| 3' GGTGGCGGACCGGTACCCCA 5' |
||||||
Genomic Alignments  |
Position | Identity | Strand | Target | Genomic Target | S. purpuratus 5.0 | NW_022145607.1:33442109..33442128 | 20/20 | Antisense | target | prdm1 |
| NW_022145607.1:255..274 | 19/20 | off-target | blimp1/krox | ||||
| NW_022145612.1:32540622..32540641 | 18/20 | Antisense | off-target | LOC115919239 | |||
| P. miniata 3.0 | NW_024037050.1:2484524..2484543 | 18/20 | Sense | off-target | wdr97 | ||
| NW_024037054.1:4499518..4499537 | 17/20 | Antisense | off-target | LOC119722722 | |||
| NW_024037052.1:14028843..14028862 | 17/20 | Antisense | unknown | ||||
| Publications | |||||||
| ???morpholino.displaySummary.papersFirst??? |
mRNA splicing variants of the transcription factor Blimp1 differentially regulate germline genes in echinoderms., Dev Biol 2025 |
||||||
| ???morpholino.displaySummary.papersRecent??? | |||||||
| ???morpholino.displaySummary.papersAll??? | |||||||