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ECB-MORPHOLINO-26398295
Morpholino Name: prdm1 MO5
Synonyms: Sp_Blimp1/Krox Beta MASO
Target mRNA: prdm1
Derived from:

Morpholino Type: splice blocking morpholino
Sequence: 5' CAATAACCATTTCTCCCTTTCGCTT 3'

Source: Gene Tools LLC


Target mRNA S. purpuratus
Identities 24/25
genome
MO
 
5' AAGCGAAAGGGAGAAATGGTTATCG 3'
   ||||||||||||||||||||||| |
3' TTCGCTTTCCCTCTTTACCAATAAC 5'
      
Genomic Alignments Position Identity Strand Target Target mRNA
S. purpuratus 5.0 NW_022145607.1:33436226..33436250 24/25 Antisense target prdm1
NW_022145607.1:103..127 25/25 off-target blimp1/krox
NW_022145612.1:12051942..12051966 21/25 Sense off-target LOC105443757
NW_022145609.1:39484888..39484912 21/25 Sense unknown
NW_022145613.1:5737642..5737666 21/25 Sense unknown
P. miniata 3.0 NW_024037048.1:994999..995023 21/25 Sense off-target hps1
L. variegatus 3.0 chr2:73358416..73358440 21/25 Sense off-target ttc28
Publications
???morpholino.displaySummary.papersFirst??? mRNA splicing variants of the transcription factor Blimp1 differentially regulate germline genes in echinoderms., Dev Biol 2025  
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