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Echinobase

Summary Attributions Wiki
ECB-CRE-26397171
CRE Name: CRE1
Synonyms: CyIIIa_5p
Nearby Gene: CyIIIa
Derived from: S. purpuratus

Sequence:



Nearby Gene S. purpuratus
Identities 585/2350
genome
CRE
 
5' AGAACCCCGCATCGTATATACATTCCCATAAACACACACACACATTCACACAAAATGTAACTTTTTTAATACTTGAAAACATAATTATCATTCTTTGATGTACAGCACATAGTTGACACAAAGGGGATGCTTTTAGAATAGTTGAAAACACCGTGCTTTCTGTGAGAGGGAATGACCCTGATCCCCGACCCATACACACATGCAAACATCCAGGACGTAGATAAGGGGGCATGTGAATATGTGCACCCCTCCCCCCCCCCCCCCCTCCCCCAACCATCACATGATAAGAAAATATACAGAAAGGTGAAAGTGGAGAGGAGGAAATGTAACGTAAAATGAATATGCTATCTTCCCCACACCCTCCCATTGTAACTTCGCATTTTATCCATCGGGTAAGATTGATCCCCTCCCCCACCTCACCCTCCCCCCCCCCCCCCTCCTACTAAACCTGAGCCCCTCAATGCCTGGACCCACGTTACGCCATTTTACGCACTTTCCGGCCGTTTTTATTAGACCCTATACTCGTAATGTAAAAGGGTTTTGCAGCCATGTTATTTTTCACGGTATATCTAAGTGTGTTTTTCGGGGAAAAACTTGACAAAGTTACTCCCTGTGGATAAATTTCCTAATTTGCGGGTCCTAGTTTTAGTTACTTATGACAAACAAATTATGAAAAGCAAAACATTAAGGTAAAATACAGGAATAACATAAAGAGGTCTCAAGGTTTTGAACAGTTGAAATGTTGTTAAATTACATCTCACAAACAACTGTATAAAATAATTTAAAATAAGTAGACACACGGAGAGATTGTGGGACATGTCGAACACTCCTCTGCAGACCCTTGTGTCAGATGCAAGGATTTTATACGAAATCTATCAGAACAGACGCAGGCCGGTTGTGGTCATGGTTTTAAAAGTAGAAAGTTTGGGTCATTTTGTCGGTTGTCCGACATTTGCTCCTGCTAAAATTGCCTTGCATCAATTTCATACTCACACTTTGTTCTTGACTTCAATCCTTGACCCAACAATATATCTAACCGTTACCCTTAACCTAACCTTAAAGCCAAATGTAACTCTAACCCCGATCCCTCGTATGTGACTTAATAAAGACAGCCGCAAGGGACCATTTTCGTAATGTAACCAGATTTAATGCATAAGTCTTTGTGAAGTGCCTCAATACATATTATATCATTCGCCTCATAAGAATAACAACGTTTCAATAGTCAGAATGCAAAGTACATGTTGCTAGGTAGGTCAAGCCATATTGTTTGTCCTACCTGGCAACAACTTATGTATGCCGTTCGGATTTTGTCTATTGAAATACTATTATTCTTATCAGGTGAATGAAATTTTTTATTGAGGCACCTCACTATTAAAGACTTATGCATTAAATTTGGTTACATTACGAAACTGGCCTATTGGAGGAGGAGTACGCATCTTACAAATCGTACGGCGGCGCACAAATGCGGGGTTCGCCCTGATCTGGGCCTCTAATGGCGGCGGAAAGATTAAGTATGTAAGAAATAAGTAATGCATGGATCTCACATGAATACACAAGCAACCGGCACAAGGGAATGGACTTAAAGAGCTAGCGAGAATCATTCAACCATAATGGAAACTCTGATTGGACCACGGTGAATGGGATATACTGAGCTACTTTAAAAGGAGTATTTAATTCAGGTTATGCACGCTCTGGTGGTATGAGGTTTCAATAGGCCAGACGTTATAGGAAAGATTGCGATTGAAGACTCCCAAGAAAAGGGTAACAATGGAGCGATAAAATTGTTTCTCCCCTTTGAGTTAATGCTTTTTGTCATGCCTAATTATACCTCGGTGAGGCTCGGTCACACCGCCTAAACGATTCTATACCCCCTCCAAACTGAGCCCCATTTAAGCTTAATCCTATTTTGGTCCCGTACTGGCCAACAGTATGTAGACGCCTAAGTTTATTATTGCATTGTCATTCATTGTCGCGACATACTTGTAGTTAGCTTTTTATTCCTCCTTACTTTCTTTGGGTATTAGCTGCGAAGCTTATCTATTGGCCTCGTTGTCAGATTTGTTTTTAAAAAGAATAAATGAAGCGCAAACAAACTTTATTAAGCAAAAAAGCACCGAATCTCATTTGCATATCCTTTTCAATGCATTCCTTATCTGCCCTGAGGCGTACGATGTGTCTAAATTGTCTCCTTATTTGGTCAAAAACCCTGGACATAACTCTCGCTTGGGGGTCTTTGTCCAAGAAAGGGGTAGTACATTACTTGGTCCCCCACAGTATCATTTCACTCTCTACCAAGCAATCAAGCAGGTGGTGTCATCCAGTTCTCTTTCTCTTCTCTCTCTAACTCGGT 3'
   |         |  |   | | |     |     |      ||| | |        |    |     | | |    |             | |     |    |    | | |   | | |      |         |      |             |   | || |    |    | |  | | |  |          | | |  |||  |  | |      |   |  ||  |    | |    |                 | |  |      ||   | | ||  |||| |    |   |   ||  |   ||      |  |||     || |||  |            | | |   | |     |  ||||               |   ||      | |   |  |  ||  ||     ||    |    | |  | |        | | |||| ||             |        ||      | |   |          |||      |  | | | |  |              |   |      |    || |    |     || |           | |      | | || |  |   |    |  |   |   |   |   |  |      ||    |       ||     |  |   |  | ||       |   ||| |    |        ||       |             |  ||||    |||    ||  |     |              |     |   |           | ||        |||  |  |       |          | |          | ||          |                   |  | |  ||     | ||   |   ||      |                 | ||     |        |  |  |   | |||  ||          ||||        | |      |       ||   |      |     |     |  |  |||   |      ||        |  |   ||    |       |          |  || |    |        |    |    ||          | | |||          | | |  ||  |  |  ||  | | |          ||| | |          ||    |    |        |      ||  || ||     | |    || |    |                ||| |  |    |  || |   |  ||   | ||  |    |        |  |     ||     | |                 || |   | |       |     |  |         |      |    |                  ||   |      ||||   |   ||    | | |   |  | |      ||     | |    |||  |  | |    ||   |    |   |    |        |  |    |   |      |  |    ||  | ||           |  | | |   |    | |      |      | ||   |  |  |||  ||      |  |    | ||     |  ||     |  || |      |  |    ||  |                | |  ||          |   |       ||             || ||   |      | |              ||  |  |      || |        | ||||               | |              | |       |          |                  |  ||    ||    |    ||         ||  |  |   |    | |||    || |  |      |  |  ||||    |    | |         | |  | | |||   |     ||            | ||   |  |    |  |    | |  ||| |          | |  | |   |          ||  || |    | |  |    | |          |           |   |    |  | | | | | |  | |  |  ||    |    | ||     |        | |      |   |            ||| ||  ||||    |  |   |  ||        | |  |         | | |         |          | |        | |  |      |        | ||    
3' TGGCTCAATCTCTCTCTTCTCTTTCTCTTGACCTACTGTGGTGGACGAACTAACCAACCAGCTCTCACTTTACTATGACACCCCCTGGTTCATTTCATGATGGGGAAGGAACCTGTTTCTGGGGGTTCGCTCTCAATACAGGTCCCAAAACTGGTTTATTCCTCTGTTAAATCTGTGTAGCATGCGGAGTCCCGTCTATTCCTTACGTAACTTTTCCTATACGTTTACTCTAAGCCACGAAAAAACGAATTATTTCAAACAAACGCGAAGTAAATAAGAAAAATTTTTGTTTACACTGTTGCTCCGGTTATCTATTCGAAGCGTCGATTATGGGTTTCTTTCATTCCTCCTTATTTTTCGATTGATGTTCATACAGCGCTGTTACTTACTGTTACGTTATTATTTGAATCCGCAGATGTATGACAACCGGTCATGCCCTGGTTTTATCCTAATTCGAATTTACCGAGTCAAACCTCCCCCATATCTTAGCAAATCCGCCACACTGGCTCGTAGTGGCTCCATATTAATCCGTACTGTTTTTCGTAATTGAGTTTCCCCTCTTTGTTAAAATAGCGAGGTAACAATGGAAAAAGAACCCTCAGAAGTTAGCGTTAGAAAGGATATTGCAGACCGGATAACTTTGGAGTATGGTGGTCTCGCACGTATTGGACTTAATTTATGAGGAAAATTTCATCGAGTCATATAGGGTAAGTGGCACCAGGTTAGTCTCAAAGGTAATACCAACTTACTAAGAGCGATCGAGAAATTCAGGTAAGGGAACACGGCCAACGAAAACATAAGTACACTCTAGGTACGTAATGAATAAAGAATGTATGAATTAGAAAGGCGGCGGTATTCTCCGGGTCTAGTCCCGCTTGGGGCGTAAACACGCGGCGGCATGCTAAACATTCTACGCAATGAGGAGGAGGTTATCCGGTCAAAGCATTACATTGGTTTAAATTACGTATTCAGAAATTATCACTCCACGGAGTTATTTTTTAAAGTAAGTGGACTATTCTTATTATCATAAAGTTATCTGTTTTAGGCTTGCCGTATGTAATCAACAACGGTCCATCCTGTTTGTTATACCGAACTGGATGGATCGTTGTACATGGCACGTAAGACTGATAACTTTGCAACAATAAGAATACTCCGCTTACTATATTATACATAACTCCGTGAAGTGTTTCTGAATACGTAATTTAGACCAATGTAATGCTTTTACCAGGAACGCCGACAGAAATAATTCAGTGTATGCTCCCTAGCCCCAATCTCAATGTAAACCGAAATTCCAATCCAATTCCCATTGCCAATCTATATAACAACCCAGTTCCTAACTTCAGTTCTTGTTTCACACTCATACTTTAACTACGTTCCGTTAAAATCGTCCTCGTTTACAGCCTGTTGGCGTTTTACTGGGTTTGAAAGATGAAAATTTTGGTACTGGTGTTGGCCGGACGCAGACAAGACTATCTAAAGCATATTTTAGGAACGTAGACTGTGTTCCCAGACGTCTCCTCACAAGCTGTACAGGGTGTTAGAGAGGCACACAGATGAATAAAATTTAATAAAATATGTCAACAAACACTCTACATTAAATTGTTGTAAAGTTGACAAGTTTTGGAACTCTGGAGAAATACAATAAGGACATAAAATGGAATTATAAAACGAAAAGTATTAAACAAACAGTATTCATTGATTTTGATCCTGGGCGTTTAATCCTTTAAATAGGTGTCCCTCATTGAAACAGTTCAAAAAGGGGCTTTTTGTGTAATCTATATGCACTTTTTATTGTACCGACGTTTTGGGAAAATGTAATGCTCATATCCCAGATTATTTTTGCCGGCCTTTCACGCATTTTACCGCATTGCACCCAGGTCCGTAACTCCCCGAGTCCAAATCATCCTCCCCCCCCCCCCCCTCCCACTCCACCCCCTCCCCTAGTTAGAATGGGCTACCTATTTTACGCTTCAATGTACCCTCCCACACCCCTTCTATCGTATAAGTAAAATGCAATGTAAAGGAGGAGAGGTGAAAGTGGAAAGACATATAAAAGAATAGTAAACTACCAACCCCCTCCCCCCCCCCTCCCCACGTGTATAAGTGTACGGGGGAATAGATGCAGGACCTACAAACGTACACACATACCCAGCCCCTAGTCCCAGTAAGGGAGAGTGTCTTTCGTGCCACAAAAGTTGATAAGATTTTCGTAGGGGAAACACAGTTGATACACGACATGTAGTTTCTTACTATTAACACAAAATTCATAATTTTTTCAATGTAAAACACACTTACACACACACACAAATACCCTTACATATATGCTACGCCCCAAGACTCTTTCGACGTC 5'
      
Genomic Alignments Position Identity Strand Target Nearby Gene
S. purpuratus 5.0 NW_022145599.1:19791601..19793963 2363/2363 Sense target CyIIIa
Publications
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Sequence tested in:
Species ECAO Tissue ECAO Stage Attribution
S. purpuratus
dorsal ectoderm early pluteus larva stage
ECB-ART-32609