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Echinobase

Summary Attributions Wiki
ECB-GRNA-26396945
gRNA Name: LOC588806 gRNA25
Synonyms: HpPKS 297-320
Genomic Target: LOC588806
Derived from:

Sequence: 5' GGGGCGAGATCTTGAAGAAC 3'



Genomic Target S. purpuratus
Identities 18/20
genome
gRNA
 
5' GTTCTTTAAGATCTCGCCCA 3'
   |||||| |||||||||||| 
3' CAAGAAGTTCTAGAGCGGGG 5'
      
Genomic Alignments Position Identity Strand Target Genomic Target
S. purpuratus 5.0 NW_022145610.1:2715904..2715923 18/20 Antisense target LOC588806
NW_022145612.1:27902511..27902530 16/20 Sense off-target LOC100891619
NW_022145612.1:28299732..28299751 16/20 Sense off-target LOC115929866
NW_022145613.1:33193992..33194011 16/20 Sense off-target LOC105437937
NW_022145599.1:17109209..17109228 16/20 Sense off-target LOC115923748
NW_022145599.1:22087042..22087061 16/20 Sense off-target LOC100887873
P. miniata 3.0 NW_024037070.1:7853800..7853819 18/20 Antisense off-target LOC119739535
NW_024037072.1:36796752..36796771 16/20 Antisense off-target LOC119742152
NW_024037063.1:1842096..1842115 17/20 Sense unknown
L. variegatus 3.0 chr5:36164306..36164325 17/20 Sense off-target LOC121416024
chr19:17394899..17394918 16/20 Sense off-target LOC121406314
Publications
???morpholino.displaySummary.papersFirst??? Genetic manipulation of the pigment pathway in a sea urchin reveals distinct lineage commitment prior to metamorphosis in the bilateral to radial body plan transition., Sci Rep 2020     
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