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Echinobase

Summary Attributions Wiki
ECB-GRNA-26396940
gRNA Name: LOC586240 gRNA3
Synonyms: HpFMO3 204-227
Genomic Target: LOC586240
Derived from:

Sequence: 5' GGAGGACAGTCCTTGGGGAA 3'



Genomic Target S. purpuratus
Identities 19/20
genome
gRNA
 
5' TTCCCCAAGGACTGTCCGCC 3'
   ||||||||||||||||| ||
3' AAGGGGTTCCTGACAGGAGG 5'
      
Genomic Alignments Position Identity Strand Genomic Target
S. purpuratus 5.0 NW_022145610.1:35289827..35289846 19/20 Antisense LOC586240
NW_022145599.1:33251360..33251379 17/20 Sense egf1
NW_022145604.1:6512058..6512077 16/20 Sense bindin
NW_022145570.1:2190899..2190918 16/20 Sense LOC115918009
P. miniata 3.0 NW_024037074.1:19742203..19742222 16/20 Antisense LOC119746271
L. variegatus 3.0 chr1:33135036..33135055 17/20 Sense yipf6
chr7:11509605..11509624 17/20 Sense xrcc3
chr17:28012464..28012483 17/20 Antisense LOC121430514
chr3:32044413..32044432 17/20 Sense LOC121410784
chr5:4948773..4948792 17/20
chr1:40479988..40480007 16/20
Publications
???morpholino.displaySummary.papersFirst??? Genetic manipulation of the pigment pathway in a sea urchin reveals distinct lineage commitment prior to metamorphosis in the bilateral to radial body plan transition., Sci Rep 2020                    
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