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Echinobase

Summary Attributions Wiki
ECB-GRNA-26396863
gRNA Name: six1 gRNA1
Synonyms: Pm-Six1/2 44
Genomic Target: six1
Derived from:

Sequence: 5' CTGCGAAGTTTTGCAGCAGT 3'



Genomic Target P. miniata
Identities 20/20
genome
gRNA
 
5' ACTGCTGCAAAACTTCGCAG 3'
   ||||||||||||||||||||
3' TGACGACGTTTTGAAGCGTC 5'
      
Genomic Alignments Position Identity Strand Target Genomic Target
S. purpuratus 5.0 NW_022145598.1:8093716..8093735 16/20 Antisense off-target LOC100891112
NW_022145601.1:11246101..11246120 16/20 Sense off-target LOC105446089
NW_022145597.1:25932386..25932405 17/20 Sense unknown
NW_022145601.1:29738641..29738660 17/20 Antisense unknown
NW_022145611.1:1962843..1962862 16/20 Antisense unknown
P. miniata 3.0 NW_024037051.1:5761093..5761112 20/20 Sense target six1
NW_024037053.1:4831549..4831568 17/20 Antisense off-target LOC119722529
NW_024037052.1:11210812..11210831 17/20 Antisense off-target LOC119722045
NW_024037071.1:9171745..9171764 17/20 Sense off-target LOC119739804
NW_024037071.1:9171745..9171764 17/20 Sense off-target LOC119739805
NW_024037052.1:11303099..11303118 17/20 Antisense off-target LOC119722047
NW_024037052.1:11278870..11278889 17/20 Antisense off-target LOC119722046
NW_024037052.1:11067490..11067509 17/20 Antisense unknown
L. variegatus 3.0 chr2:51567915..51567934 17/20 Sense unknown
chr8:32020685..32020704 16/20 Antisense unknown
Publications
???morpholino.displaySummary.papersFirst??? Molecular mechanisms of tubulogenesis revealed in the sea star hydro-vascular organ., Nat Commun 2023     
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