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Echinobase

Summary Attributions Wiki
ECB-GRNA-26396385

gRNA Name: LOC578013 gRNA2
Synonyms: DCLK2 gRNA 2
Genomic Target: LOC578013
Derived from:

Sequence: 5' ACGGTGACCGTTTCTTCAAG 3'



Genomic Target S. purpuratus
Identities 20/20
genome
gRNA
5' CTTGAAGAAACGGTCACCGT 3'
   ||||||||||||||||||||
3' GAACTTCTTTGCCAGTGGCA 5'
     
Genomic Alignments Position Identity Strand Genomic Target
S. purpuratus 5.0 NW_022145612.1:1819206..1819225 20/20 Sense LOC578013
NW_022145605.1:11237365..11237384 18/20
NW_022145606.1:43175584..43175603 17/20
NW_022145611.1:16975140..16975159 17/20
P. miniata 3.0 XR_005273568.1:247..266 17/20 Antisense LOC119744472
NW_024037049.1:4801227..4801246 16/20 Sense wars1
L. variegatus 3.0 chr1:27777902..27777921 18/20 Antisense LOC121410439
chr1:80674203..80674222 18/20 Sense LOC121424760
chr10:16233649..16233668 18/20 Sense LOC121422634
chr17:23148975..23148994 18/20 Antisense LOC121430659
chr17:26534374..26534393 18/20 Antisense LOC121430600
chr4:50464506..50464525 18/20 Antisense LOC121414249
chr6:7200267..7200286 18/20 Sense LOC121416775
chr7:9357931..9357950 18/20 Antisense LOC121418387
chr8:3335705..3335724 18/20 Antisense LOC121419828
chr8:3479174..3479193 18/20 Antisense LOC121419833
chr1:22855564..22855583 18/20
chr13:12556249..12556268 18/20
chr8:9225541..9225560 18/20
chr18:1031072..1031091 17/20
chr4:59396668..59396687 17/20
chr5:18685656..18685675 17/20
chr13:16913670..16913689 16/20
chr13:23255579..23255598 16/20
Publications
???morpholino.displaySummary.papersFirst??? Functional contribution of DCLKs in sea urchin development., Dev Dyn 2021  
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