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Echinobase

Summary Attributions Wiki
ECB-GRNA-26396374
gRNA Name: LOC587664 gRNA1
Synonyms: DCKL1 gRNA 1
Genomic Target: LOC587664
Derived from:

Sequence: 5' CCGTATCTCCAGAACGCTTC 3'



Genomic Target S. purpuratus
Identities 20/20
genome
gRNA
 
5' GAAGCGTTCTGGAGATACGG 3'
   ||||||||||||||||||||
3' CTTCGCAAGACCTCTATGCC 5'
      
Genomic Alignments Position Identity Strand Target Genomic Target
S. purpuratus 5.0 NW_022145596.1:24008598..24008617 20/20 Antisense target LOC587664
NW_022145596.1:21731482..21731501 20/20 Antisense off-target LOC115918032
P. miniata 3.0 NW_024037063.1:17160918..17160937 19/20 Sense off-target LOC119732186
NW_024037063.1:17135761..17135780 18/20 Sense off-target LOC119732184
NW_024037069.1:22439778..22439797 16/20 Antisense off-target LOC119737707
NW_024037069.1:22468366..22468385 16/20 Antisense off-target LOC119736561
NW_024037061.1:15673373..15673392 16/20 Sense off-target LOC119730399
L. variegatus 3.0 chr1:6581810..6581829 18/20 Sense off-target LOC121415739
chr4:48577467..48577486 16/20 Antisense off-target LOC121414222
chr7:32859517..32859536 17/20 Sense unknown
chr14:27506517..27506536 17/20 Antisense unknown
Publications
???morpholino.displaySummary.papersFirst??? Functional contribution of DCLKs in sea urchin development., Dev Dyn 2021  
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