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Echinobase

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ECB-MORPHOLINO-26395838
Morpholino Name: ccna2 MO3
Synonyms: Cyclin A morpholino
Target mRNA: ccna2
Derived from:

Morpholino Type: translation blocking morpholino (5' UTR)
Sequence: 5' TTCACTTTGTTCCCGAGATTAAC 3'

Source: Gene Tools LLC


Target mRNA P. miniata
Identities 23/23
genome
MO
 
5' GTTAATCTCGGGAACAAAGTGAA 3'
   |||||||||||||||||||||||
3' CAATTAGAGCCCTTGTTTCACTT 5'
      
Genomic Alignments Position Identity Strand Target Target mRNA
S. purpuratus 5.0 NW_022145612.1:24723574..24723596 21/23 Antisense off-target LOC115929858
NW_022145615.1:9298712..9298734 19/23 Antisense off-target zfp808
NW_022145615.1:9298712..9298734 19/23 Antisense off-target LOC105446833
NW_022145514.1:82047..82069 19/23 Sense off-target LOC105442155
NW_022145514.1:87635..87657 19/23 Sense off-target LOC115920920
NW_022145542.1:346208..346230 19/23 Sense off-target LOC100888331
NW_022145542.1:346208..346230 19/23 Sense off-target LOC115924003
NW_022145542.1:351851..351873 19/23 Sense off-target LOC100888331
NW_022145542.1:351851..351873 19/23 Sense off-target LOC115924002
NW_022145576.1:2186881..2186903 19/23 Antisense off-target LOC115920215
NW_022145576.1:2195601..2195623 19/23 Antisense off-target LOC115920216
NW_022145597.1:21294705..21294727 19/23 Antisense off-target LOC115922705
NW_022145600.1:27613160..27613182 19/23 Antisense off-target LOC100893711
NW_022145600.1:27613160..27613182 19/23 Antisense off-target LOC115924196
NW_022145600.1:27618803..27618825 19/23 Antisense off-target LOC100893711
NW_022145605.1:18082898..18082920 19/23 Sense off-target LOC105444893
NW_022145605.1:18082898..18082920 19/23 Sense off-target LOC115926712
NW_022145605.1:18091621..18091643 19/23 Sense off-target LOC105442158
NW_022145605.1:18100344..18100366 19/23 Sense off-target LOC115926408
NW_022145606.1:51342948..51342970 19/23 Antisense off-target LOC105447204
NW_022145606.1:51348938..51348960 19/23 Antisense off-target LOC105439199
NW_022145612.1:36201766..36201788 19/23 Antisense off-target LOC115919168
NW_022145597.1:21300281..21300303 19/23 Antisense unknown
NW_022145606.1:45361156..45361178 19/23 Sense unknown
NW_022145606.1:45369150..45369172 19/23 Sense unknown
NW_022145614.1:4266729..4266751 19/23 Sense unknown
NW_022145614.1:4272739..4272761 19/23 Sense unknown
P. miniata 3.0 NW_024037059.1:4547889..4547911 23/23 Antisense target ccna2
NW_024037075.1:2841041..2841063 19/23 Antisense off-target rif1
L. variegatus 3.0 chr16:16437285..16437307 19/23 Antisense off-target LOC121430007
chr1:78390915..78390937 19/23 Antisense unknown
chr3:39185308..39185330 19/23 Antisense unknown
Publications
???morpholino.displaySummary.papersFirst??? Selective dephosphorylation by PP2A-B55 directs the meiosis I-meiosis II transition in oocytes., Elife 2021     
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