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Echinobase

Summary Attributions Wiki
ECB-GRNA-26395099
gRNA Name: LOC588806 gRNA20
Synonyms: SpPKS1 175
Genomic Target: LOC588806
Derived from:

Sequence: 5' GGTGGTGTCTTTGTCGGTAT 3'



Genomic Target S. purpuratus
Identities 19/20
genome
gRNA
 
5' ATACCGACAAAGACACCACA 3'
   ||||||||||||||||||| 
3' TATGGCTGTTTCTGTGGTGG 5'
      
Genomic Alignments Position Identity Strand Target Genomic Target
S. purpuratus 5.0 NW_022145610.1:2716025..2716044 19/20 Sense target LOC588806
NW_022145596.1:262234..262253 17/20 Antisense unknown
NW_022145605.1:24518503..24518522 16/20 Sense unknown
NW_022145596.1:13579659..13579678 16/20 Sense unknown
NW_022145599.1:10018379..10018398 16/20 Sense unknown
NW_022145599.1:9664912..9664931 16/20 Sense unknown
P. miniata 3.0 NW_024037069.1:2527049..2527068 17/20 Antisense unknown
NW_024037076.1:10800296..10800315 16/20 Sense unknown
L. variegatus 3.0 chr15:27084737..27084756 18/20 Sense off-target LOC121428528
chr17:23790443..23790462 17/20 Sense off-target LOC121430457
chr9:33345234..33345253 16/20 Sense off-target LOC121421794
chr9:37832334..37832353 16/20 Antisense off-target LOC121420951
Publications
???morpholino.displaySummary.papersFirst??? Optimizing CRISPR/Cas9-based gene manipulation in echinoderms., Dev Biol 2022  
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