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Echinobase

Summary Attributions Wiki
ECB-GRNA-26395065
gRNA Name: LOC588806 gRNA3
Synonyms: Sp.PKS1.806(-)
Genomic Target: LOC588806
Derived from:

Sequence: 5' GAGAGGGTTGTCTTTGGTG 3'



Genomic Target S. purpuratus
Identities 19/19
genome
gRNA
 
5' CACCAAAGACAACCCTCTC 3'
   |||||||||||||||||||
3' GTGGTTTCTGTTGGGAGAG 5'
      
Genomic Alignments Position Identity Strand Target Genomic Target
S. purpuratus 5.0 NW_022145610.1:2716660..2716678 19/19 Antisense target LOC588806
NW_022145606.1:9914961..9914979 17/19 Antisense off-target efnb1
NW_022145610.1:11861763..11861781 17/19 Antisense off-target LOC581395
NW_022145526.1:1545418..1545436 17/19 Sense off-target LOC115922321
NW_022145615.1:20256567..20256585 16/19 Antisense off-target trip4
NW_022145606.1:45209113..45209131 16/19 Antisense off-target LOC105443953
NW_022145605.1:15828263..15828281 15/19 Antisense off-target mvp
NW_022145514.1:539389..539407 15/19 Sense off-target LOC100889470
NW_022145606.1:11882306..11882324 17/19 Antisense unknown
NW_022145610.1:26910617..26910635 16/19 Sense unknown
NW_022145610.1:31319548..31319566 16/19 Sense unknown
NW_022145614.1:6760565..6760583 16/19 Antisense unknown
NW_022145610.1:30023471..30023489 15/19 Sense unknown
P. miniata 3.0 NW_024037063.1:17788400..17788418 15/19 Sense off-target prkci
NW_024037059.1:11329361..11329379 16/19 Antisense unknown
L. variegatus 3.0 chr5:36157175..36157193 17/19 Sense off-target LOC121416024
chr5:39846461..39846479 17/19 Sense off-target LOC121416125
chr10:17942518..17942536 15/19 Sense off-target LOC121422397
chr18:5857952..5857970 15/19 Antisense off-target LOC121431689
chr2:72129328..72129346 15/19 Antisense off-target LOC121408911
chr10:18035017..18035035 16/19 Antisense unknown
chr15:9332432..9332450 16/19 Sense unknown
chr8:26951661..26951679 15/19 Antisense unknown
chr1:46281394..46281412 15/19 Sense unknown
chr1:95014925..95014943 15/19 Sense unknown
chr14:31575059..31575077 15/19 Antisense unknown
chr14:32096135..32096153 15/19 Sense unknown
chr3:22724370..22724388 15/19 Antisense unknown
chr5:3799787..3799805 15/19 Antisense unknown
chr8:26380700..26380718 15/19 Antisense unknown
Publications
???morpholino.displaySummary.papersFirst??? Albinism as a visual, in vivo guide for CRISPR/Cas9 functionality in the sea urchin embryo., Mol Reprod Dev 2016  
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