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Nature
2023 Nov 01;6237987:555-561. doi: 10.1038/s41586-023-06669-2.
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Molecular evidence of anteroposterior patterning in adult echinoderms.
Formery L
,
Peluso P
,
Kohnle I
,
Malnick J
,
Thompson JR
,
Pitel M
,
Uhlinger KR
,
Rokhsar DS
,
Rank DR
,
Lowe CJ
.
Abstract
The origin of the pentaradial body plan of echinoderms from a bilateral ancestor is one of the most enduring zoological puzzles1,2. Because echinoderms are defined by morphological novelty, even the most basic axial comparisons with their bilaterian relatives are problematic. To revisit this classical question, we used conserved anteroposterior axial molecular markers to determine whether the highly derived adult body plan of echinoderms masks underlying patterning similarities with other deuterostomes. We investigated the expression of a suite of conserved transcription factors with well-established roles in the establishment of anteroposterior polarity in deuterostomes3-5 and other bilaterians6-8 using RNA tomography and in situ hybridization in the sea star Patiria miniata. The relative spatial expression of these markers in P. miniata ambulacral ectoderm shows similarity with other deuterostomes, with the midline of each ray representing the most anterior territory and the most lateral parts exhibiting a more posterior identity. Strikingly, there is no ectodermal territory in the sea star that expresses the characteristic bilaterian trunk genetic patterning programme. This finding suggests that from the perspective of ectoderm patterning, echinoderms are mostly head-like animals and provides a developmental rationale for the re-evaluation of the events that led to the evolution of the derived adult body plan of echinoderms.
Albuixech-Crespo,
Molecular regionalization of the developing amphioxus neural tube challenges major partitions of the vertebrate brain.
2017, Pubmed
Albuixech-Crespo,
Molecular regionalization of the developing amphioxus neural tube challenges major partitions of the vertebrate brain.
2017,
Pubmed
Arenas-Mena,
Spatial expression of Hox cluster genes in the ontogeny of a sea urchin.
2000,
Pubmed
,
Echinobase
Barton-Owen,
Pax3/7 duplicated and diverged independently in amphioxus, the basal chordate lineage.
2018,
Pubmed
Baughman,
Genomic organization of Hox and ParaHox clusters in the echinoderm, Acanthaster planci.
2014,
Pubmed
,
Echinobase
Bellantuono,
Coral thermal tolerance: tuning gene expression to resist thermal stress.
2012,
Pubmed
Bromham,
Hemichordates and deuterostome evolution: robust molecular phylogenetic support for a hemichordate + echinoderm clade.
1999,
Pubmed
Byrne,
Evolution of a pentameral body plan was not linked to translocation of anterior Hox genes: the echinoderm HOX cluster revisited.
2016,
Pubmed
,
Echinobase
Cameron,
Evolution of the chordate body plan: new insights from phylogenetic analyses of deuterostome phyla.
2000,
Pubmed
Cheng,
Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm.
2021,
Pubmed
Choi,
Third-generation in situ hybridization chain reaction: multiplexed, quantitative, sensitive, versatile, robust.
2018,
Pubmed
Cisternas,
Expression of Hox4 during development of the pentamerous juvenile sea star, Parvulastra exigua.
2009,
Pubmed
,
Echinobase
Darras,
Anteroposterior axis patterning by early canonical Wnt signaling during hemichordate development.
2018,
Pubmed
De Robertis,
A common plan for dorsoventral patterning in Bilateria.
1996,
Pubmed
Formery,
Neural anatomy of echinoid early juveniles and comparison of nervous system organization in echinoderms.
2021,
Pubmed
,
Echinobase
Fritzenwanker,
Untangling posterior growth and segmentation by analyzing mechanisms of axis elongation in hemichordates.
2019,
Pubmed
Gonzalez,
The Adult Body Plan of Indirect Developing Hemichordates Develops by Adding a Hox-Patterned Trunk to an Anterior Larval Territory.
2017,
Pubmed
Hara,
Expression patterns of Hox genes in larvae of the sea lily Metacrinus rotundus.
2006,
Pubmed
,
Echinobase
Hirth,
An urbilaterian origin of the tripartite brain: developmental genetic insights from Drosophila.
2003,
Pubmed
Holland,
Evolution of basal deuterostome nervous systems.
2015,
Pubmed
Holley,
A conserved system for dorsal-ventral patterning in insects and vertebrates involving sog and chordin.
1995,
Pubmed
Huelsenbeck,
MRBAYES: Bayesian inference of phylogenetic trees.
2001,
Pubmed
Junker,
Genome-wide RNA Tomography in the zebrafish embryo.
2014,
Pubmed
Kikuchi,
Patterning of anteroposterior body axis displayed in the expression of Hox genes in sea cucumber Apostichopus japonicus.
2015,
Pubmed
,
Echinobase
Krumlauf,
Hox homeobox genes and regionalisation of the nervous system.
1993,
Pubmed
Kruse,
Tomo-seq: A method to obtain genome-wide expression data with spatial resolution.
2016,
Pubmed
Kumar,
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.
2016,
Pubmed
Lee,
The specification of dorsal cell fates in the vertebrate central nervous system.
1999,
Pubmed
Lemons,
Co-option of an anteroposterior head axis patterning system for proximodistal patterning of appendages in early bilaterian evolution.
2010,
Pubmed
Li,
Minimap2: pairwise alignment for nucleotide sequences.
2018,
Pubmed
Liu,
Requirement for Wnt3 in vertebrate axis formation.
1999,
Pubmed
Lowe,
Anteroposterior patterning in hemichordates and the origins of the chordate nervous system.
2003,
Pubmed
Lowe,
The deuterostome context of chordate origins.
2015,
Pubmed
,
Echinobase
Lowe,
Radical alterations in the roles of homeobox genes during echinoderm evolution.
1997,
Pubmed
,
Echinobase
Lowe,
Dorsoventral patterning in hemichordates: insights into early chordate evolution.
2006,
Pubmed
Lowe,
Hemichordate embryos: procurement, culture, and basic methods.
2004,
Pubmed
Martín-Zamora,
Annelid functional genomics reveal the origins of bilaterian life cycles.
2023,
Pubmed
Montanaro,
Improved ultrastructure of marine invertebrates using non-toxic buffers.
2016,
Pubmed
Morris,
Oral-aboral identity displayed in the expression of HpHox3 and HpHox11/13 in the adult rudiment of the sea urchin Holopneustes purpurescens.
2014,
Pubmed
,
Echinobase
Omori,
Gene expression analysis of three homeobox genes throughout early and late development of a feather star Anneissia japonica.
2020,
Pubmed
,
Echinobase
Paganos,
A New Model Organism to Investigate Extraocular Photoreception: Opsin and Retinal Gene Expression in the Sea Urchin Paracentrotus lividus.
2022,
Pubmed
,
Echinobase
Pani,
Ancient deuterostome origins of vertebrate brain signalling centres.
2012,
Pubmed
Peterson,
The A/P axis in echinoderm ontogeny and evolution: evidence from fossils and molecules.
2000,
Pubmed
,
Echinobase
Satoh,
On a possible evolutionary link of the stomochord of hemichordates to pharyngeal organs of chordates.
2014,
Pubmed
Schneider,
NIH Image to ImageJ: 25 years of image analysis.
2012,
Pubmed
Shimamura,
Longitudinal organization of the anterior neural plate and neural tube.
1995,
Pubmed
Simão,
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs.
2015,
Pubmed
Smith,
Deuterostomes in a twist: the origins of a radical new body plan.
2008,
Pubmed
,
Echinobase
Smith,
Cambrian spiral-plated echinoderms from Gondwana reveal the earliest pentaradial body plan.
2013,
Pubmed
,
Echinobase
Tarazona,
Evolution of limb development in cephalopod mollusks.
2019,
Pubmed
Tardaguila,
SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.
2018,
Pubmed
Timmer,
BMP signaling patterns the dorsal and intermediate neural tube via regulation of homeobox and helix-loop-helix transcription factors.
2002,
Pubmed
Tomer,
Profiling by image registration reveals common origin of annelid mushroom bodies and vertebrate pallium.
2010,
Pubmed
Tominaga,
A single-cell RNA-seq analysis of early larval cell-types of the starfish, Patiria pectinifera: Insights into evolution of the chordate body plan.
2023,
Pubmed
,
Echinobase
True,
Gene co-option in physiological and morphological evolution.
2002,
Pubmed
Wenger,
Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome.
2019,
Pubmed
Yamada,
Expression of chick Tbx-2, Tbx-3, and Tbx-5 genes during early heart development: evidence for BMP2 induction of Tbx2.
2000,
Pubmed
Zákány,
Hox genes in digit development and evolution.
1999,
Pubmed