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Am J Physiol Cell Physiol
2016 Jun 01;31011:C911-20. doi: 10.1152/ajpcell.00029.2016.
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Functional diversification of sea urchin ABCC1 (MRP1) by alternative splicing.
Gökirmak T
,
Campanale JP
,
Reitzel AM
,
Shipp LE
,
Moy GW
,
Hamdoun A
.
Abstract
The multidrug resistance protein (MRP) family encodes a diverse repertoire of ATP-binding cassette (ABC) transporters with multiple roles in development, disease, and homeostasis. Understanding MRP evolution is central to unraveling their roles in these diverse processes. Sea urchins occupy an important phylogenetic position for understanding the evolution of vertebrate proteins and have been an important invertebrate model system for study of ABC transporters. We used phylogenetic analyses to examine the evolution of MRP transporters and functional approaches to identify functional forms of sea urchin MRP1 (also known as SpABCC1). SpABCC1, the only MRP homolog in sea urchins, is co-orthologous to human MRP1, MRP3, and MRP6 (ABCC1, ABCC3, and ABCC6) transporters. However, efflux assays revealed that alternative splicing of exon 22, a region critical for substrate interactions, could diversify functions of sea urchin MRP1. Phylogenetic comparisons also indicate that while MRP1, MRP3, and MRP6 transporters potentially arose from a single transporter in basal deuterostomes, alternative splicing appears to have been the major mode of functional diversification in invertebrates, while duplication may have served a more important role in vertebrates. These results provide a deeper understanding of the evolutionary origins of MRP transporters and the potential mechanisms used to diversify their functions in different groups of animals.
Annilo,
Evolution of the vertebrate ABC gene family: analysis of gene birth and death.
2006, Pubmed
Annilo,
Evolution of the vertebrate ABC gene family: analysis of gene birth and death.
2006,
Pubmed
Bakos,
Portrait of multifaceted transporter, the multidrug resistance-associated protein 1 (MRP1/ABCC1).
2007,
Pubmed
Bartosz,
Human mast cells secreting leukotriene C4 express the MRP1 gene-encoded conjugate export pump.
1998,
Pubmed
Bera,
MRP8, a new member of ABC transporter superfamily, identified by EST database mining and gene prediction program, is highly expressed in breast cancer.
2001,
Pubmed
Boraldi,
Multidrug resistance protein-6 (MRP6) in human dermal fibroblasts. Comparison between cells from normal subjects and from Pseudoxanthoma elasticum patients.
2003,
Pubmed
Bosnjak,
Multidrug efflux transporters limit accumulation of inorganic, but not organic, mercury in sea urchin embryos.
2009,
Pubmed
,
Echinobase
Campanale,
Programmed reduction of ABC transporter activity in sea urchin germline progenitors.
2012,
Pubmed
,
Echinobase
Cole,
Multidrug resistance protein 1 (MRP1, ABCC1), a "multitasking" ATP-binding cassette (ABC) transporter.
2014,
Pubmed
Cole,
Overexpression of a transporter gene in a multidrug-resistant human lung cancer cell line.
1992,
Pubmed
Conseil,
Functional importance of three basic residues clustered at the cytosolic interface of transmembrane helix 15 in the multidrug and organic anion transporter MRP1 (ABCC1).
2006,
Pubmed
Darriba,
ProtTest 3: fast selection of best-fit models of protein evolution.
2011,
Pubmed
Dean,
The human ATP-binding cassette (ABC) transporter superfamily.
2001,
Pubmed
Deeley,
Transmembrane transport of endo- and xenobiotics by mammalian ATP-binding cassette multidrug resistance proteins.
2006,
Pubmed
Dehal,
The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins.
2002,
Pubmed
Edgar,
MUSCLE: multiple sequence alignment with high accuracy and high throughput.
2004,
Pubmed
Fletcher,
ABC transporters in cancer: more than just drug efflux pumps.
2010,
Pubmed
Fromm,
Human MRP3 transporter: identification of the 5'-flanking region, genomic organization and alternative splice variants.
1999,
Pubmed
Gadsby,
The ABC protein turned chloride channel whose failure causes cystic fibrosis.
2006,
Pubmed
Gökirmak,
Localization and substrate selectivity of sea urchin multidrug (MDR) efflux transporters.
2012,
Pubmed
,
Echinobase
Gökirmak,
Transport in technicolor: mapping ATP-binding cassette transporters in sea urchin embryos.
2014,
Pubmed
,
Echinobase
Goldstone,
The chemical defensome: environmental sensing and response genes in the Strongylocentrotus purpuratus genome.
2006,
Pubmed
,
Echinobase
Grailles,
The Drosophila melanogaster multidrug-resistance protein 1 (MRP1) homolog has a novel gene structure containing two variable internal exons.
2003,
Pubmed
Grant,
Analysis of the intron-exon organization of the human multidrug-resistance protein gene (MRP) and alternative splicing of its mRNA.
1997,
Pubmed
Haber,
Association of high-level MRP1 expression with poor clinical outcome in a large prospective study of primary neuroblastoma.
2006,
Pubmed
Hamdoun,
Activation of multidrug efflux transporter activity at fertilization in sea urchin embryos (Strongylocentrotus purpuratus).
2004,
Pubmed
,
Echinobase
He,
Alternative splicing of the multidrug resistance protein 1/ATP binding cassette transporter subfamily gene in ovarian cancer creates functional splice variants and is associated with increased expression of the splicing factors PTB and SRp20.
2004,
Pubmed
Jin,
The evolutionary relationship between gene duplication and alternative splicing.
2008,
Pubmed
Klein,
The ATP-binding cassette (ABC) transporter Bpt1p mediates vacuolar sequestration of glutathione conjugates in yeast.
2002,
Pubmed
Koike,
Identification of proline residues in the core cytoplasmic and transmembrane regions of multidrug resistance protein 1 (MRP1/ABCC1) important for transport function, substrate specificity, and nucleotide interactions.
2004,
Pubmed
Kool,
Expression of human MRP6, a homologue of the multidrug resistance protein gene MRP1, in tissues and cancer cells.
1999,
Pubmed
Kopelman,
Alternative splicing and gene duplication are inversely correlated evolutionary mechanisms.
2005,
Pubmed
Kruh,
The MRP family of drug efflux pumps.
2003,
Pubmed
Leier,
The MRP gene encodes an ATP-dependent export pump for leukotriene C4 and structurally related conjugates.
1994,
Pubmed
Litman,
The multidrug-resistant phenotype associated with overexpression of the new ABC half-transporter, MXR (ABCG2).
2000,
Pubmed
Loe,
ATP-dependent 17 beta-estradiol 17-(beta-D-glucuronide) transport by multidrug resistance protein (MRP). Inhibition by cholestatic steroids.
1996,
Pubmed
Long,
Molecular characterization and functions of zebrafish ABCC2 in cellular efflux of heavy metals.
2011,
Pubmed
Mitra,
Role of ABCC1 in export of sphingosine-1-phosphate from mast cells.
2006,
Pubmed
Nies,
The apical conjugate efflux pump ABCC2 (MRP2).
2007,
Pubmed
Qian,
Glutathione stimulates sulfated estrogen transport by multidrug resistance protein 1.
2001,
Pubmed
Ren,
Genome-wide analysis of the ATP-binding cassette (ABC) transporter gene family in sea lamprey and Japanese lamprey.
2015,
Pubmed
Ren,
Functional comparison between YCF1 and MRP1 expressed in Sf21 insect cells.
2000,
Pubmed
Ronquist,
MrBayes 3: Bayesian phylogenetic inference under mixed models.
2003,
Pubmed
Scheffer,
MRP6 (ABCC6) detection in normal human tissues and tumors.
2002,
Pubmed
Sharma,
The glutathione-mediated detoxification pathway in yeast: an analysis using the red pigment that accumulates in certain adenine biosynthetic mutants of yeasts reveals the involvement of novel genes.
2003,
Pubmed
Shimizu,
Characterization of the mouse Abcc12 gene and its transcript encoding an ATP-binding cassette transporter, an orthologue of human ABCC12.
2003,
Pubmed
Shipp,
ATP-binding cassette (ABC) transporter expression and localization in sea urchin development.
2012,
Pubmed
,
Echinobase
Shipp,
ABCC5 is required for cAMP-mediated hindgut invagination in sea urchin embryos.
2015,
Pubmed
,
Echinobase
Slot,
Mammalian multidrug-resistance proteins (MRPs).
2011,
Pubmed
Sodergren,
The genome of the sea urchin Strongylocentrotus purpuratus.
2006,
Pubmed
,
Echinobase
Srinivasan,
The ABCs of human alternative splicing: a review of ATP-binding cassette transporter splicing.
2009,
Pubmed
Stamatakis,
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.
2014,
Pubmed
Sturm,
The ABC transporter gene family of Daphnia pulex.
2009,
Pubmed
Suzuki,
Detailed structural analysis on both human MRP5 and mouse mrp5 transcripts.
2000,
Pubmed
Tamaki,
The controversial role of ABC transporters in clinical oncology.
2011,
Pubmed
Tarnay,
The dMRP/CG6214 gene of Drosophila is evolutionarily and functionally related to the human multidrug resistance-associated protein family.
2004,
Pubmed
van de Ven,
The ABC of dendritic cell development and function.
2009,
Pubmed
Weekes,
Latency-associated degradation of the MRP1 drug transporter during latent human cytomegalovirus infection.
2013,
Pubmed
Whalen,
Actin polymerization controls the activation of multidrug efflux at fertilization by translocation and fine-scale positioning of ABCB1 on microvilli.
2012,
Pubmed
,
Echinobase
Xu,
Influence of P-glycoprotein on embryotoxicity of the antifouling biocides to sea urchin (Strongylocentrotus intermedius).
2011,
Pubmed
,
Echinobase
Zaja,
Cloning and molecular characterization of apical efflux transporters (ABCB1, ABCB11 and ABCC2) in rainbow trout (Oncorhynchus mykiss) hepatocytes.
2008,
Pubmed
Zalcberg,
MRP1 not MDR1 gene expression is the predominant mechanism of acquired multidrug resistance in two prostate carcinoma cell lines.
2000,
Pubmed
Zhang,
Identification of an amino acid residue in multidrug resistance protein 1 critical for conferring resistance to anthracyclines.
2001,
Pubmed
Zhang,
Functional importance of polar and charged amino acid residues in transmembrane helix 14 of multidrug resistance protein 1 (MRP1/ABCC1): identification of an aspartate residue critical for conversion from a high to low affinity substrate binding state.
2003,
Pubmed
Zöchbauer-Müller,
P-glycoprotein and MRP1 expression in axillary lymph node metastases of breast cancer patients.
2001,
Pubmed