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Nature
2023 Nov 01;6237987:555-561. doi: 10.1038/s41586-023-06669-2.
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Molecular evidence of anteroposterior patterning in adult echinoderms.
Formery L, Peluso P, Kohnle I, Malnick J, Thompson JR, Pitel M, Uhlinger KR, Rokhsar DS, Rank DR, Lowe CJ.
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The origin of the pentaradial body plan of echinoderms from a bilateral ancestor is one of the most enduring zoological puzzles1,2. Because echinoderms are defined by morphological novelty, even the most basic axial comparisons with their bilaterian relatives are problematic. To revisit this classical question, we used conserved anteroposterior axial molecular markers to determine whether the highly derived adult body plan of echinoderms masks underlying patterning similarities with other deuterostomes. We investigated the expression of a suite of conserved transcription factors with well-established roles in the establishment of anteroposterior polarity in deuterostomes3-5 and other bilaterians6-8 using RNA tomography and in situ hybridization in the sea star Patiria miniata. The relative spatial expression of these markers in P. miniata ambulacral ectoderm shows similarity with other deuterostomes, with the midline of each ray representing the most anterior territory and the most lateral parts exhibiting a more posterior identity. Strikingly, there is no ectodermal territory in the sea star that expresses the characteristic bilaterian trunk genetic patterning programme. This finding suggests that from the perspective of ectoderm patterning, echinoderms are mostly head-like animals and provides a developmental rationale for the re-evaluation of the events that led to the evolution of the derived adult body plan of echinoderms.
Albuixech-Crespo,
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2017, Pubmed
Albuixech-Crespo,
Molecular regionalization of the developing amphioxus neural tube challenges major partitions of the vertebrate brain.
2017,
Pubmed Arenas-Mena,
Spatial expression of Hox cluster genes in the ontogeny of a sea urchin.
2000,
Pubmed
,
Echinobase Barton-Owen,
Pax3/7 duplicated and diverged independently in amphioxus, the basal chordate lineage.
2018,
Pubmed Baughman,
Genomic organization of Hox and ParaHox clusters in the echinoderm, Acanthaster planci.
2014,
Pubmed
,
Echinobase Bellantuono,
Coral thermal tolerance: tuning gene expression to resist thermal stress.
2012,
Pubmed Bromham,
Hemichordates and deuterostome evolution: robust molecular phylogenetic support for a hemichordate + echinoderm clade.
1999,
Pubmed Byrne,
Evolution of a pentameral body plan was not linked to translocation of anterior Hox genes: the echinoderm HOX cluster revisited.
2016,
Pubmed
,
Echinobase Cameron,
Evolution of the chordate body plan: new insights from phylogenetic analyses of deuterostome phyla.
2000,
Pubmed Cheng,
Haplotype-resolved de novo assembly using phased assembly graphs with hifiasm.
2021,
Pubmed Choi,
Third-generation in situ hybridization chain reaction: multiplexed, quantitative, sensitive, versatile, robust.
2018,
Pubmed Cisternas,
Expression of Hox4 during development of the pentamerous juvenile sea star, Parvulastra exigua.
2009,
Pubmed
,
Echinobase Darras,
Anteroposterior axis patterning by early canonical Wnt signaling during hemichordate development.
2018,
Pubmed De Robertis,
A common plan for dorsoventral patterning in Bilateria.
1996,
Pubmed Formery,
Neural anatomy of echinoid early juveniles and comparison of nervous system organization in echinoderms.
2021,
Pubmed
,
Echinobase Fritzenwanker,
Untangling posterior growth and segmentation by analyzing mechanisms of axis elongation in hemichordates.
2019,
Pubmed Gonzalez,
The Adult Body Plan of Indirect Developing Hemichordates Develops by Adding a Hox-Patterned Trunk to an Anterior Larval Territory.
2017,
Pubmed Hara,
Expression patterns of Hox genes in larvae of the sea lily Metacrinus rotundus.
2006,
Pubmed
,
Echinobase Hirth,
An urbilaterian origin of the tripartite brain: developmental genetic insights from Drosophila.
2003,
Pubmed Holland,
Evolution of basal deuterostome nervous systems.
2015,
Pubmed Holley,
A conserved system for dorsal-ventral patterning in insects and vertebrates involving sog and chordin.
1995,
Pubmed Huelsenbeck,
MRBAYES: Bayesian inference of phylogenetic trees.
2001,
Pubmed Junker,
Genome-wide RNA Tomography in the zebrafish embryo.
2014,
Pubmed Kikuchi,
Patterning of anteroposterior body axis displayed in the expression of Hox genes in sea cucumber Apostichopus japonicus.
2015,
Pubmed
,
Echinobase Krumlauf,
Hox homeobox genes and regionalisation of the nervous system.
1993,
Pubmed Kruse,
Tomo-seq: A method to obtain genome-wide expression data with spatial resolution.
2016,
Pubmed Kumar,
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.
2016,
Pubmed Lee,
The specification of dorsal cell fates in the vertebrate central nervous system.
1999,
Pubmed Lemons,
Co-option of an anteroposterior head axis patterning system for proximodistal patterning of appendages in early bilaterian evolution.
2010,
Pubmed Li,
Minimap2: pairwise alignment for nucleotide sequences.
2018,
Pubmed Liu,
Requirement for Wnt3 in vertebrate axis formation.
1999,
Pubmed Lowe,
Dorsoventral patterning in hemichordates: insights into early chordate evolution.
2006,
Pubmed Lowe,
Hemichordate embryos: procurement, culture, and basic methods.
2004,
Pubmed Lowe,
Radical alterations in the roles of homeobox genes during echinoderm evolution.
1997,
Pubmed
,
Echinobase Lowe,
The deuterostome context of chordate origins.
2015,
Pubmed
,
Echinobase Lowe,
Anteroposterior patterning in hemichordates and the origins of the chordate nervous system.
2003,
Pubmed Martín-Zamora,
Annelid functional genomics reveal the origins of bilaterian life cycles.
2023,
Pubmed Montanaro,
Improved ultrastructure of marine invertebrates using non-toxic buffers.
2016,
Pubmed Morris,
Oral-aboral identity displayed in the expression of HpHox3 and HpHox11/13 in the adult rudiment of the sea urchin Holopneustes purpurescens.
2014,
Pubmed
,
Echinobase Omori,
Gene expression analysis of three homeobox genes throughout early and late development of a feather star Anneissia japonica.
2020,
Pubmed
,
Echinobase Paganos,
A New Model Organism to Investigate Extraocular Photoreception: Opsin and Retinal Gene Expression in the Sea Urchin Paracentrotus lividus.
2022,
Pubmed
,
Echinobase Pani,
Ancient deuterostome origins of vertebrate brain signalling centres.
2012,
Pubmed Peterson,
The A/P axis in echinoderm ontogeny and evolution: evidence from fossils and molecules.
2000,
Pubmed
,
Echinobase Satoh,
On a possible evolutionary link of the stomochord of hemichordates to pharyngeal organs of chordates.
2014,
Pubmed Schneider,
NIH Image to ImageJ: 25 years of image analysis.
2012,
Pubmed Shimamura,
Longitudinal organization of the anterior neural plate and neural tube.
1995,
Pubmed Simão,
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs.
2015,
Pubmed Smith,
Deuterostomes in a twist: the origins of a radical new body plan.
2008,
Pubmed
,
Echinobase Smith,
Cambrian spiral-plated echinoderms from Gondwana reveal the earliest pentaradial body plan.
2013,
Pubmed
,
Echinobase Tarazona,
Evolution of limb development in cephalopod mollusks.
2019,
Pubmed Tardaguila,
SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.
2018,
Pubmed Timmer,
BMP signaling patterns the dorsal and intermediate neural tube via regulation of homeobox and helix-loop-helix transcription factors.
2002,
Pubmed Tomer,
Profiling by image registration reveals common origin of annelid mushroom bodies and vertebrate pallium.
2010,
Pubmed Tominaga,
A single-cell RNA-seq analysis of early larval cell-types of the starfish, Patiria pectinifera: Insights into evolution of the chordate body plan.
2023,
Pubmed
,
Echinobase True,
Gene co-option in physiological and morphological evolution.
2002,
Pubmed Wenger,
Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome.
2019,
Pubmed Yamada,
Expression of chick Tbx-2, Tbx-3, and Tbx-5 genes during early heart development: evidence for BMP2 induction of Tbx2.
2000,
Pubmed Zákány,
Hox genes in digit development and evolution.
1999,
Pubmed