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Mitochondrial DNA B Resour
2017 Dec 21;31:38-39. doi: 10.1080/23802359.2017.1419093.
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The complete mitochondrial genome of Echinoecus nipponicus Miyake, 1939 (Crustacea: Decapoda: Pilumnidae), a symbiont of sea urchins.
Lee SH
,
Oh TK
,
Shin MH
.
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The mitochondrial genome of a crab symbiotic with sea urchins, Echinoecus nipponicus, was completely sequenced for the first time. The total mitogenome length of E. nipponicus was 16,173 bp including 13 protein-coding genes, 2 rRNA genes, and 22 tRNA genes. The phylogenetic tree confirmed that E. nipponicus belonged to the subsection Heterotremata within Brachyura. This is the first record of the complete mitogenome for the subfamily Eumedoninae.
Figure 1. A maximum-likelihood (ML) tree was inferred from the mitogenomic sequences of the representative species belonging to the subsection Heterotremata, with two taxa in the subsection Thoracotremata as outgroups. Phylogenetic analyses were constructed by the sequence matrix based on unambiguously aligning regions of the first and second codon positions of the 11 protein-coding genes. Bootstrap values above 50% in the ML analysis and posterior probabilities above 0.90 in the Bayesian inference (BI) analysis were shown at each node. The symbiotic crab E. nipponicus, which was examined in this study, is highlighted in black.
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