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Genome Announc
2016 Jan 14;41:. doi: 10.1128/genomeA.01556-15.
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Draft Genome Sequence of Altererythrobacter troitsensis JCM 17037, Isolated from the Sea Urchin Strongylocentrotus intermedius.
Zhou P
,
Wu YH
,
Cheng H
,
Wang CS
,
Xu XW
.
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The habitats of the genus Altererythrobacter are various, including marine sediment, seawater, rhizosphere of wild rice, desert sand, etc. The genome of the type strain of Altererythrobacter troitsensis JCM 17037, isolated from sea urchin, was sequenced. This study would not only facilitate the understanding of the physiology, adaptation, and evolution of the Altererythrobacter species, but also provide a good resource for the study of synthesis of astaxanthin, since several enzymes involved in the production of astaxanthin were predicted.
Fan,
Altererythrobacter dongtanensis sp. nov., isolated from a tidal flat.
2011, Pubmed
Fan,
Altererythrobacter dongtanensis sp. nov., isolated from a tidal flat.
2011,
Pubmed
Kumar,
Altererythrobacter indicus sp. nov., isolated from wild rice (Porteresia coarctata Tateoka).
2008,
Pubmed
Kurtz,
Versatile and open software for comparing large genomes.
2004,
Pubmed
Kwon,
Altererythrobacter epoxidivorans gen. nov., sp. nov., an epoxide hydrolase-active, mesophilic marine bacterium isolated from cold-seep sediment, and reclassification of Erythrobacter luteolus Yoon et al. 2005 as Altererythrobacter luteolus comb. nov.
2007,
Pubmed
Lai,
Altererythrobacter marinus sp. nov., isolated from deep seawater.
2009,
Pubmed
Luo,
SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler.
2012,
Pubmed
Matsumoto,
Altererythrobacter ishigakiensis sp. nov., an astaxanthin-producing bacterium isolated from a marine sediment.
2011,
Pubmed
Nedashkovskaya,
Altererythrobacter troitsensis sp. nov., isolated from the sea urchin Strongylocentrotus intermedius.
2013,
Pubmed
,
Echinobase
Overbeek,
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST).
2014,
Pubmed
Park,
Altererythrobacter namhicola sp. nov. and Altererythrobacter aestuarii sp. nov., isolated from seawater.
2011,
Pubmed
Seo,
Altererythrobacter marensis sp. nov., isolated from seawater.
2010,
Pubmed
Simpson,
ABySS: a parallel assembler for short read sequence data.
2009,
Pubmed
Xue,
Altererythrobacter xinjiangensis sp. nov., isolated from desert sand, and emended description of the genus Altererythrobacter.
2012,
Pubmed