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Abstract
We present a genome assembly from an individual Marthasterias glacialis (the spiny starfish; Echinodermata; Asteroidea; Forcipulatida; Asteriidae). The genome sequence is 521 megabases in span. The majority of the assembly, 99.44%, is scaffolded into 22 chromosomal pseudomolecules. The mitochondrial genome has also been assembled, and is 16 kb in span.
Challis,
BlobToolKit - Interactive Quality Assessment of Genome Assemblies.
2020,
Pubmed
Chow,
gEVAL - a web-based browser for evaluating genome assemblies.
2016,
Pubmed
Ghurye,
Integrating Hi-C links with assembly graphs for chromosome-scale assembly.
2019,
Pubmed
Guan,
Identifying and removing haplotypic duplication in primary genome assemblies.
2020,
Pubmed
Hall,
The crown-of-thorns starfish genome as a guide for biocontrol of this coral reef pest.
2017,
Pubmed
,
Echinobase
Howe,
Significantly improving the quality of genome assemblies through curation.
2021,
Pubmed
Kerpedjiev,
HiGlass: web-based visual exploration and analysis of genome interaction maps.
2018,
Pubmed
Nurk,
HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from high-fidelity long reads.
2020,
Pubmed
Rao,
A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.
2014,
Pubmed
Saotome,
Chromosomes of Japanese starfishes.
2002,
Pubmed
,
Echinobase
Simão,
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs.
2015,
Pubmed
Yun,
Identification of novel SALMFamide neuropeptides in the starfish Marthasterias glacialis.
2007,
Pubmed
,
Echinobase
