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Antibiotics (Basel)
2023 Aug 18;128:. doi: 10.3390/antibiotics12081331.
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Antimicrobial Activity and Molecular Docking Studies of the Biotransformation of Diterpene Acanthoic Acid Using the Fungus Xylaria sp.
Marinho AMDR
,
de Oliveira CMSC
,
Silva-Silva JV
,
de Jesus SCA
,
Siqueira JES
,
de Oliveira LC
,
Auzier JF
,
Soares LN
,
Pinheiro MLB
,
Silva SC
,
Medeiros LS
,
Costa EV
,
Marinho PSB
.
Abstract
Biotransformations are reactions mediated by microorganisms, such as fungi. These bioreactions have high chemo- and stereoselectivity on organic substrates and can be applied in the search for new bioactive compounds. In this study, acanthoic acid (AA) was biotransformed using the fungus Xylaria sp., giving the novel compound 3β,7β-dihydroxyacanthoic acid (S1). Both the AA and the product S1 were tested against Gram-positive and Gram-negative bacteria. To identify and validate possible biological targets as enzymes or proteins involved in the activity observed in vitro, we used the molecular docking method. Hydroxylation at the C-3 and C-7 positions of the biotransformation product enhanced its activity against Escherichia coli as well as its binding affinity and interactions with superoxide dismutase 1 (SOD1; PDB ID 4A7G). Based on our results, the SOD1 enzyme was suggested to be a possible target for the antioxidant activity of product S1.
308631/2021-8 National Council for Scientific and Technological Development, 310540/2022-4 National Council for Scientific and Technological Development, 304577/2020-0 National Council for Scientific and Technological Development
Ahmmed,
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Ahmmed,
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Arunrattiyakorn,
Biotransformation of β-Mangostin by an Endophytic Fungus of Garcinia mangostana to Furnish Xanthenes with an Unprecedented Heterocyclic Skeleton.
2018,
Pubmed
Asili,
Labdanes and isopimaranes from Platycladus orientalis and their effects on erythrocyte membrane and on Plasmodium falciparum growth in the erythrocyte host cells.
2004,
Pubmed
Brvar,
Structure-based discovery of substituted 4,5'-bithiazoles as novel DNA gyrase inhibitors.
2012,
Pubmed
Carneiro,
Casbane diterpene as a promising natural antimicrobial agent against biofilm-associated infections.
2010,
Pubmed
Chen,
Sesquiterpenoids and diterpenes with antimicrobial activity from Leptosphaeria sp. XL026, an endophytic fungus in Panax notoginseng.
2019,
Pubmed
Cochrane,
Breaking down the cell wall: Strategies for antibiotic discovery targeting bacterial transpeptidases.
2020,
Pubmed
Dou,
Acanthoic acid, unique potential pimaradiene diterpene isolated from Acanthopanax koreanum Nakai (Araliaceae): A review on its pharmacology, molecular mechanism, and structural modification.
2022,
Pubmed
Fan,
Compounds from Platycladus orientalis and their inhibitory effects on nitric oxide and TNF-α production.
2011,
Pubmed
Fàbrega,
Mechanism of action of and resistance to quinolones.
2009,
Pubmed
Han,
Acanthoic acid modulates lipogenesis in nonalcoholic fatty liver disease via FXR/LXRs-dependent manner.
2019,
Pubmed
Hanwell,
Avogadro: an advanced semantic chemical editor, visualization, and analysis platform.
2012,
Pubmed
Hao,
Biotransformation of Flavonoids Improves Antimicrobial and Anti-Breast Cancer Activities In Vitro.
2021,
Pubmed
Kasemsuk,
A novel synthetic acanthoic acid analogues and their cytotoxic activity in cholangiocarcinoma cells.
2021,
Pubmed
Kershaw,
X-ray crystallography and computational docking for the detection and development of protein-ligand interactions.
2013,
Pubmed
Kohanski,
How antibiotics kill bacteria: from targets to networks.
2010,
Pubmed
Levy,
Structural Basis for E. coli Penicillin Binding Protein (PBP) 2 Inhibition, a Platform for Drug Design.
2019,
Pubmed
Li,
Two new bioactive diterpenes identified from Isodon interruptus.
2020,
Pubmed
Li,
Bioactive ent-isopimarane diterpenoids from Euphorbia neriifolia.
2020,
Pubmed
Li,
Molecular and functional characterization of mitochondrial manganese superoxide dismutase from Macrobrachium rosenbergii during bacterial infection.
2021,
Pubmed
Liu,
Biotransformation ability of endophytic fungi: from species evolution to industrial applications.
2021,
Pubmed
López-Vallejo,
Vicinal 1H-1H NMR coupling constants from density functional theory as reliable tools for stereochemical analysis of highly flexible multichiral center molecules.
2011,
Pubmed
Macías-Rubalcava,
Secondary metabolites of endophytic Xylaria species with potential applications in medicine and agriculture.
2017,
Pubmed
Marquina,
Hydroxylation of the diterpenes ent-kaur-16-en-19-oic and ent-beyer-15-en-19-oic acids by the fungus Aspergillus niger.
2009,
Pubmed
Nogueira,
ent-Pimarane and ent-Kaurane Diterpenes from Aldama discolor (Asteraceae) and Their Antiprotozoal Activity.
2016,
Pubmed
Pina,
Antiprotozoal and Antibacterial Activity of Ravenelin, a Xanthone Isolated from the Endophytic Fungus Exserohilum rostratum.
2021,
Pubmed
Porto,
Pimarane-type diterpenes obtained by biotransformation: antimicrobial properties against clinically isolated Gram-positive multidrug-resistant bacteria.
2013,
Pubmed
Porto,
Antimicrobial ent-pimarane diterpenes from Viguiera arenaria against Gram-positive bacteria.
2009,
Pubmed
Rusch,
Biotransformation of ciprofloxacin by Xylaria longipes: structure elucidation and residual antibacterial activity of metabolites.
2018,
Pubmed
Saha,
Antimicrobial Diterpenes: Recent Development From Natural Sources.
2021,
Pubmed
Schiebel,
Intriguing role of water in protein-ligand binding studied by neutron crystallography on trypsin complexes.
2018,
Pubmed
Schmidt,
The potential of secondary metabolites from plants as drugs or leads against protozoan neglected diseases - part I.
2012,
Pubmed
Shakour,
How do biocatalysis and biotransformation affect Citrus dietary flavonoids chemistry and bioactivity? A review.
2020,
Pubmed
Silva-Silva,
Monomethylsulochrin isolated from biomass extract of Aspergillus sp. against Leishmania amazonensis: In vitro biological evaluation and molecular docking.
2022,
Pubmed
Tari,
Pyrrolopyrimidine inhibitors of DNA gyrase B (GyrB) and topoisomerase IV (ParE). Part I: Structure guided discovery and optimization of dual targeting agents with potent, broad-spectrum enzymatic activity.
2013,
Pubmed
Thongnest,
Oxygenated pimarane diterpenes from Kaempferia marginata.
2005,
Pubmed
Ullah,
Bioactivity Profile of the Diterpene Isosteviol and its Derivatives.
2019,
Pubmed
Vaishampayan,
Antimicrobials Functioning through ROS-Mediated Mechanisms: Current Insights.
2021,
Pubmed