Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041626500.1 PREDICTED: Lytechinus variegatus protein ECT2-like (LOC121429478), mRNA GCCAATCAAATCGCTTGATTCGGGATTAGCGGTGAGTTTGAATACGGAAAACATGGCAGCAATCGATGCG TGCGAAGGAAAGAGTTGAAGGCGATTGACAGGATTTTGACTCCCTGATTACTGTTTATATTCCGAGTAAA AGGACATCACGGATTTCCTGTATCTTGTGCCTTGAAGTATAATTTAGCATCATTATTTGAAGAAGAACTG AATGGGACAATGGCTGGGCCAATGGAAGTGACAGATTCTCAGCTGAGTTGCAGTACGACATTCAGTACAT CAACCATGAATGATACCACAAGAACGAGTTCATTGACTCCCGTAGATGTAAGGTTTTGTTTGATAGGAGC CAAGCTGAGAGATCATACCCAGCTTCATCATGCATTGCAAAAAATGAAGATGCCTTACGTGTTCTCCGAC ACCGGGCAAGAATACACCGTCAAAGATGAGCAGGCAGAGACCGTCTTTGTCATGTCAGAGTTTGAAGGAG AAATCTTTGAAGCGTTGTCAAATAAAAACCGTCACATTCTAGGCACCACGGCAATATTACAGAGTGCAGC TAAAGATGAGCATCTTCCCTGCGTGACGAGACCGCTGTTCTGTCGGCACATGGACAAGCTGGTCATCTGC TTCACAGGGTTCTTGGACAAGGCTGAAATCAAGCGGCTGGTCGTCCTGGTCCACAACATGGCCGGAAGCA TCCGCAAGGACTACGGTCCTCGCGTCACGCATCTCGTGGCTAACTCGTCCAGCAGTGAGAAATACAGGGT TGCTGTTAGTTTAGGCACTCCGATTATGACCAAAGAATGGATCCACGCTACGTGGGATAGACGTCATCAG CAAGAGTGCAGTGCTACATCAGAAGAAATGTTGAAATATAAGATGCCTCCATTCTTTGGCTGTACACTTG GTTTTGTGGGCTTTACGCAAGAAGATCAGAAGCACATGGAGGAGGTTACACAAACGCAAGGAGGAAGTAT AGAATCGACTGCCAACGATTCCTGTACACACATAGTCGTTGACGAGAACACCGTGGCTGAACAAGTCTTA GACTACCCAAGCAAAGTCAAAGTCGTCAAGCAGGAATGGTTCTGGGCCAGTATTCAAATGGACGCGAGAG CAGAGGAAAATTTATATACCTTCAGAATGCAATCCACCCCTGCCTCTCTTCATGGCACGCCCACCATGAT GTTCACTGGACCCAAGTCCACCCGCAAACGTCGTCTCAAGGACAGTATCGCCGCTCTCAGCTGCGACACC GACCACATGGAAACTCCCACCATGCCTGCCCAGAAGAGACGATCCAGCTTCAACGAGGGCGCCAGCTGTA TGTCCATCTCGGCCTCGTCCATCCTTGATTACAGTCAGACACCTAACAGCTCAGCAGCTCTTGCAGCTGA ACCATGTACCCCTATGGAGACGGAAACCCCCAAGAAGCCAGCCGTCCCAGCGCAGCCCCTATCAAAACGA CACATGACAGCCATGGAGTTGCTACAGACTGAGATCAACTATGTGAAGATCTTAGATACCATCATCACTG TGTTCAAAGAACCGTTGGAGACGGAGCAGACCGGTGGCCCCATCCTGGCCCAGGAGGAGATCAAGACCAT CTTCAATCGTATTCCAGACATCTATGCCGTTCATTGCAGGCTCAAGAACGACATCCAGGCTCTCATAGAC GACTACTCGGAGGACAAGAGCATCGGTCAAATATTCCTGAGACATTCCACTGATATGGGTAAGGCATACC CACCCTTTGTGAACTTCTTTGAGATAGCCAAGCAGACGGTGGTGCAGTGTGATAAACAGAAGCCAAGGTT TCATGCATTCCTCAAGATTTGTCAGAGTAAACCGGAGTGTGGTCGGCAGTCCCTGACAGAACTCCTAATC CGTCCAGTCCAGAGGTTACCCAGTATGATCCTCCTCTTGTCTGATCTGTCAAAGAGAACAACCGACTCGC ATCCAGACTACAGACACCTCAAAGATGGACTTGAGGCACTCAAAAAGGTCACAGAACAAATTAACGAAGA CAAGCGGAAAACAGAGGGCCACACCCAAATGTTTGACATCATGAACGAGATAGAGGGCGTCCCAGCTCAC CTGCTTTCAGCCCACCGCCATTTCATCACGAAGATCGACGTATCCGAGATCGGGAAAGGAGACTCGTTCG GCGAGAAGGGCATCTGTATCACCATGTTTCTCTTCTCCGACACACTAGAGATCTGTAAGAAGCGAGTAAA GCACGGCAACACAAAAACATCTCAGAAGACCTTCAAACACATAGAGCTTCTCAATCTGTCTTATATTAGG AGAGTTCTCGACATCAATGAAACGGACGAATGCCATAATGCCTTTGCCTTGCTGTGTAAGCCGCCCATGG TGGATGTCCTAGAGAGGACAGACCGTCTCTACATGTTTGCAGTGTCTGGGGATGAGAGCTGTAAGATGGA ATGGCTGAAGATCTTATGCCAGCATATGGCCAACACAACTTGTAAAACAGATGCTGAGAATTTTCTGTGC AAGATTTCTCCCGAGGACCTTGAGCTTTCCAAGAGTGACTTTGATGTCAGCAGGAAGAACAAAGCTGTTA GAGCTGCAAAGAGAGCCACCAAGAAAGTGTCGAGGACATTCTCTTTCAACCGGACACCCCGACGGTCAAT CCAGAGAGCGGTCAACAGTGTATCATCCAACTTCAGCCCGATGGTCAACGGGGAAGGCGTCAGCCCTCAG CAGTTTAGCAAGATGGGTGCAAGGTTAGCGGGTACTATGACACTCAAGGCACTTTCACCTCTGGCAAGGA GAACACCGCTCACCCCGCGCCACTTACAGAAGAGTCTTACTATGGGACCGTCAGCCAGTAAAAATATGTG AACTTGTCAAATTCAACATCTAAAGTAACCAGCCTCATCACTTACATGGAAACCTTTCTATGGGACCATC AACTAGTAAAAGTTTTGAAGTCATCAAAACGACATCCAGATGAGCGAACCTCGTCATATCAATCGAAGAC CAACTTTATACATGTACCACATACCAGGCAATCTATTTGAAATCCATTAGAATGAATGCAGATTCGTGAC TTCTGATTGGTTGTTGGAAGCCTTGCAGTAACATGGTTTGTGTCACATGATTCCGGAGGAAGATTGGATG ATCAATGTAAATATCACAAGTCCACAAGATATGACATTACGATAACGTGCCCCTTTCAGTAAAAATCAAT AGTGGTTTTTTGAAAAATGTGGAGTTTTTATACATGTGTGATAGGAACAATATTCCTATTTTTAAAGTGT AATATTCAGGTAAAAGATAAGTAAACTCATTCATCTGCATTGTATAAAGCAAAATAATTTCTTATAATAG GTGCGTATTCAATATTAAGTAACATACATTCAAATTGTTTGATTTATGGTGGATAGTTGTCGTGTACTTT ATCTGTATTCAGTATGGGCTAGTCCATTTTAACTCTACAGATTATATCATCTGGAGATAGAGACACTGAA TACAATATACCATCTCCGTATGAATTACACAATATTGGTATTTCCTGGCTCATCTAACCCATTTTAAGAA ACAAGAGAAAATTAAATAAAAATGGCCCTTCTTAACATTAGAGCACTTGTTCAGTTTTAAGCAGAAACTG GTGATTGAATCAAGTCCCCTATCTCATAGGGCTGTTTGTACATTGCAAAATGATTTTATGCGCGACTGGT GACACTTTGTGTTAGAATGATAAATCTCTACCATGCCTACGTAACTGACTGAGCACCAAAGAACATGTTC CAGCCGTATGTAACTTTGCGATTCATAGTGTTCCTGAAATAAGATGACATGTAGTATTCGCTGCTTTTTT TTCTTACCTGTGATTGATCACTTCCTTCATCCGTGGCTCTGCGTTCAATCGCAGCGATTTGTTAATTCTA TTTGGGCAAACAGAAATGCTCAATTCTTATTGGTTACACAGCACACCTATGTGTGAAGACTGCATTCCTG CTTTATTTATTTATTTTGCTCTTTGAATTCTAATGAGAAACAGCTTCATGTCTGCCACTGCTTTTTTTCA TTCTCTTGACGAGTTAGAAATATATATTACTTACCTATCCACGAAATCGGCTATTACTTGTAATTCAAAA CGCACTTTCAGGGCAACTATTTACTTGAATTCATTGTAACTGAATTTAAAAAAAAATTCAACTCAAGTCC TCATGATTCTTCTGTATCATGAAAACATTAATGTTGCAATTAATCTTACGATTCCTATCGATTGTGAGTC CCTTGCGAAAGAGAAAGTTATTTAAGATTAGAGAGTCAAAAGGAGCCTAAGCTTTCGATCCTAGCAGAAT CTTCATCGGAGGCAATATGAAATTGATTTAAGATTGGTTGAATTTCTGTGTCACCGGTACTAGGATTGAG TTATTTGATCAGCCTCAATCGGCTTACCCCCTACTGGCCGCGGATATTTTGGAAACCCTTTTTTATTTTT ACCATTTGTACTGTAAAAAGATATATTAAAATTGTGCCCTTTTGAAAAGTGGCATTGCTTTGAAAATATA TGGAAATATAACGGCTAGGGTGGCATTTTATCTACATGAAATGAGCTGATATTAGTAGCTAAGTGAAGTG TTAAAAGATATTGTATTCATTCACAAGGAAACTATTTATTACGCATCTTGTCAGATTAAAGAGTCACAAC TTGAAATGTTATTGTTTTAGTTGGG
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds