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Echinobase
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041625410.1 PREDICTED: Lytechinus variegatus coiled-coil domain-containing protein 180-like (LOC121428642), transcript variant X2, mRNA GATTGATTGTTATCCTATCCATATTTATTCTTGTCTTGTGACGAGCATCGCCCAGAGTCGGATTTTCAGT CTCAGTCCCACGCATGCCTTTTTTCGTCCGTAGATGGGTGAAAACTATGATAGTATACCATCGGATTTGA ACAGATTGTCTTACTCTTATCTGTTCTTGGAATTAAAATGATGGCAGAAACCAAAGCAGTACGAGTCGTG CCCTCGGGACATATCTACAAACAAATATTTGATGCCCAGGTGCAATTAGTCAAGACACTGGAGCAAAATG ATCACCCTCGCCAACAATGTGAACCTAAGACCTTGTCTGTCCCTTTGGTTCATGAGAACCGTGCTGAGAT GGGTAAGAGTCTGCTGCCCTCTAGAGATGTAGATTGGATGGAGAGTTTGCCAAACAACCAGCAAACTGAA AACCCTGTCCTTTACAAGCAATCTGTTGAAAATGCTGATAGGAAAGCAAAAGAACCCAAATCAGTCATCG CAGCCAGAGAAGTCAGAGGACTTGCTGATACTATTGAATCTGAGAAACTTGGATCAGATATCATAGAGAG ATTAGCAGAGAGTAGGAGAGTTAGACATGATGAGGCTACTGAAGATCTACATCATGAATTCACAATCATT TCAAATGATATTGAGCCTAAGATAGCAGCCAGTGGTGAACTTCTGATCAAGAAACTTGATGACAATGATA AAGAAATTGAGAAGATGCTTGCACGGATAGCTGATGATGATGAACTGAAAGATTATAGTCTATCTGAGTT GGTGAGTCTATGGGCACAGATAGAAGAACAAGCATGGATAAGAAGGGAGTTTATCAATGAAATGGATGCA ACTCTGACTTCATTAGAAGACGATAGGCTAGCCAAGCTGAAAGACATCCTAAAGACATACGCCAAGAAGA TGGAAGGCATTGCCTATCTAATGCCCCCTGACGTCCAGAGATTGATTGAGAAGGAATCTACTGTGATCAA TCAGACACTGCTCATAAACAGAAGAGCTTACACAGATCTACATGCTAGGTTAATGAAGACTGACATTGAA CGCGACAAGAACCATAGAGGGATCTGGGAAGATAGGCTGGCCGACTGGCGCAAGCTCAACATTGAGATTG CTGTCAATAAATTCTTGGACTTTATGCAGAGTGATCGTATTGTAAACCCTTCTAAGGTCAATGTACTTTT GGAAAAGCTGCACCATGAACAAGTTCAACTAAATGTTGAAAGACTGGAAATCTTAGCAAAACTCAATGAA ATGAAGCCTCCAAGATCGACCAAGACTGCAGCATACCAGTGGAATAAAGAGATTGTGAATTCTTGCCAAC GTATTGAGCAGGTTCATGTGACTTACCTTGATGAGTTACATACAGAATATGAACAGGTCTGCAAGGAATG CTTGGATATGGTGGAAAGTTTTCAGAGTGAACTCTTGGATGCTGGGGTCTGTACTGAGGAAAAGGTTGTG GAGGTCACAGAGGAACGGATTCTACCAGAAGTCGGTCGACGTCAAGTCTCGTTTGAGAAGGCTCTAGAAG AAATGGATCTCTCCCTTGAGAGGTTAGCAGAGCGTCATGCCCAGGAACTCAGATCACTCTTCAAATTCAC CCAGGGTGCGGCTCACCTCTGGGACGTCCATGAAATCAACCTTGCTAAGAAAGAGCGCCAGCTACAGGAA CAACTTGAAGAGTGTCGCAGGAAACATGACAATCTCAACCAGGACATGGAAGCTAATCTTGATATCTTGA TGGATAGATTGAGACAGGAAAGTAGCGAAGAAGCTCTTAAAACAACCATGGATAAGGCACATCAAATGCT TCTGAAGATTCAAGATAGCTATCTTAATTTCTATGAAGACCAGGAGATGATAGTCCAAGGCTATCCTAGT ATGGTACAAGAAGAGCTACAACGCTATGATGACACGCTCTGCATCTTCTTCGGGGTCGATAGAATTAATC CCTTGGAGAAACAGGCAGAAAGTAAGAAATTACAAGAAGAACAGGCAAGCAGCATCAAGAGTCAATCTGA TTCTCCAAAGTCCTCTAGGGCAGGGAGTAGGGCTGAGAGCAGGACTAGTAGCCAGGGCGTTAGAGAGACC AGCAGCCCGGCGGGTAGTCGAGCTGATTCCCAGGCAGGCAGCCAAGCGGGAAGTGAAGCAGGCAGTCAAC CAGACACCTCCCAGTCTACTAAACTGTCTTCAAACAAGTTTGGTACAAGTATAAGGGATTCAAGTCTGAG AAAGACTGTTCTGACATCAGACCCTAAAATGAGGGGGTCTTCCAGTCGTTCACGAGACAGCCCCTCGTCG TCTCCAGCCCCCAGCCAGGAACCTCCTATTGTCACCGAGGTGCTCCTCACATCCAATGGTACCAACTTCT ATGTCCTGACGGTTGCAGGGGAGCATGGGATCACATCGGATGGGGACCAGAATGAAGGTCAGGCGGTGTC TGAGGAGGGTCGTCCGGTATATCTAGTCAACGTCACCATCCCGCAAGAAACGCTCAACAATCTAAGAAAA ACAATGAGGATGTCCTTTCTGGAGCACCTTGAGGAATGGAAGGTCTATGCTGTAGAGAGGGCACACAGTG TAGTTGCTGCTAAGACTGAGGAGCTAAAGAGTGAGTTAGACCTGAGGCTCCATCTTCACGAGCCCCGTTC ACAGCGCACAGAGCTTGACATACACAACGTCCGAGCAGCGGAACTTCTGCTTCATCAGGAACGGGTCAGC AAGCATTCTAAGGGTGTGTCTTGCGCTCTGTCAGAGGTCAAGCAGCGGTTTGCTACGATGCAGAAAGAGC ATGACGGCGTCGTGGAGAAGTTCAAGCAAGAGATTGATACCATGGAGAATGTCTTTGTGAATGCCTCTAG ATCAGCAGATTTGGTATCTCTATCTCACCAAGTGAACACCAAGGTTGAGTCTCATATGGATGTCATCAGG GCTTCTTTGAGGCAGTTCAGGACATACCTTGATGATACACTGCAGATGCTTAGGGAATCCAATGCAAGGT TCATCAAGTCTTTCAAATTATTTTCTGATGGTGGTAACTTCTCTCCCGAGGAGGTAGAAGCTTATAAGAA GAAATTAGAAAAGTTAGCGACAAAGATAGATTCGGCTGAAGGATTTGTGATGGCTGATTTAGAAGGAATG GAAGCAAGGAGATTGGCACAAGCTACTACTATAGCTGGAAAGTTTGAGGATAGATTTAAGAGTCACCTGT TTGATCTGACATTCATTGAGAAGCTGAGTAGATGGCTAAACAACACACAGGTTAAGATCAAAGGAGAGGT GGCACAGAGTAATACACAAGCACAGAGCCTTATGAGACTCCTTAACAAACTAGAAACTAGAGTAGATGCC TGTGAAAGACCCAATCTAGACAAAGAGCAAATAACCCCTGGTGAGCTACTTGAGACGTTACCATCTATCT TCCAAGCATTTGATGAGAGAGCTCAATACCTAAACTGTGCTAAACACCTGTTGTTGAATGCTCCTCCAGC TAACCTAGCTCCATCCTCCAGAGGCAATCAAAACACAACTCCAAAGGTTGTATTTACAAGTGAGCAGCAG CAGCAGCAGGGAGTAGGAAGCCAACAGACATCTGGTACAGCTATAGCTCAGACACCCATGACATCTACTA CTACAGCAGCACTTAAAGCAGCCAAGCTACAATCTGAAGATGCTGCCGTCTCGGTCATCAAGAACATCCT CACATCTCAAAAGCACAAGATGAAAGGCCAGGAAGAGGAGACACCATTGACGACTCCATCTGTATCTAGA CCCCTAGCATCCCAGCCAGTTTCTACTGCCGGAGATGGGCAAGGAAAGGGTGTAGCTAGACCCCCTGCGA AGCTTGTTGATAAGGAGAGGTCAAAGGTCAACCATGTGAAGAGAACCACCTCTATGACATCGGAACACAA CCCACGGAGAAGTGCTTCTGGAATTCAAAAGAACAAGAATAATGGTCTCAAGTTTGATCCCAAGTACTAC GTCTTTGGAGAAAAGCCAGAAAAAGAAACTCATTTCTTAGCTTTGATAAAGAAGACACTACAAGATGCCT TGGATGGTCTACTTACCACTGCGGATTTGTACTACAGGCAGAAAGGAAGCCGTCCTGTGACCAGACCACA AGCCATTCATGAGATCTTTGAACAGTGTGCTGATGTGATCGTCACTAAACTCCAGTCTTACTACAAACAA GCTGATGAATATCATAACCAGTGCTTACAAGAATTTCGTGAGCAGCTTGAGAGGCTGGAGATAGAAGTAG CCAAGGTTCCATCGCTGGTCATCAAACAGCTTCTTAAACATCACATACAGAAAGCTAATGGTTTGATGAA ACAAGGTGGAGGACAGTTCACACAGAAACTTAGCCAGTGGGAGAAAGCAAGGACCCAGCACAAGATCTTA CTGCGCCCCACCCTAGGGCACCCACACAATCACAATGAGCTTGTATCGTTATGTGATCAGGAAGAGGAGA GGAGGAAAGAATTCATGGCTGGAGTGGACGAGAACGCCAAGAATCTCAGGGATGCTATGAAAAGCTGTGG AGATGACTTTGTGAAGCAGCTTGCTACAACGACAGAACAGCTTCTTATTCTTCTTGATTCAGAATTAACA GTAGATGACGTCATTACCGGCCGGGTGGATCCAAAGCGTATGAAAACCAGTGCCTTGATGAGACGCAAAC AAGCAGGACTCCCTCTAGAGGACAATGAGTACATTCCACTCATCAAGCGTGGCACTCGTCAATGGGAGGG GCTTCCCCTTAGTATTCAACCAGAGCCGACACCCCCTCCTAAAATAGAGACACAGACCCCTTCCCAGACG CCATCTCAGACTCGCAGTCGAAGCAGACTGGCTAAGGGTAAGAAGGTAGAGGCTGAAGTAGCTCCTAAAC CAACTACGACTGCAGCAGTGACAACACAGAAGACTACACTGGCCCATCAAGCAACCTATGATGCTAGGAA TCAAGCTTTTAAGCAAAGCACAGCTGACTACGAGCAGCGGTTGAAGGAGATCGCTACCAAGCAAGAAGAA CAGACCATTGCAGAGAACAGGTGGACAGGTAGCTGGCAGACGGCTGTCCAGAAAGTCAAAGACCTCTACT AGAAACACTCTATGACTGTACCTTTTATACGCATCATTGGAGAAAGTCTGAGAACTCTAAAAACATTCCT CTAATGTAGTTCTGTGGGGTCTGAGAAGTGCAGCATTCTGACAGTCCAATGGCATTTAAAAAGATTCCTT TGAAGTGATCCAGCCTTATCTGCAAAATTGCAGCTTTTGTTTATACAATATTCTCCTAACCCAATATCAG CTGTGAGAAAACTTGATTTGATCATCCACTATTTGGTTTCATTTGTGATTATCTCCTGCAATGAGTGTTT TTAAGTTTGGTGTCGGTGCTAGCGTTGGTGTGGAATGCATAATTGAATTTGCTTTCCCCAATCCCCAACA CCTAATTAAGTTTGGTGTAGGTGCTGGTGTAAGAAGCACAATTGCCTTCCATAGCTCTGACAACAAATTT CAGTTTACAAAAATCAAATTCAGACATACTTTTGCTCCTCCAAATTAGCCACAAAATATCATCTTAACCT GACTGCAATAATCTAAAAAATTTTGTGCCTCTTACAATGCTGTGAATATGGTGACTATCTGTAATGACGT CTGTATTTTGCCTTAACAATTGTTATTGAATCAAAGCTAAAATACTTTGTTCCCTGTATGTACTAGATTA CCTTGATATTTTCCATAGATTAACTTATATATGATGTACATATGTATATATTAAAGAAAAATGTTTCTAT TTAAAAACTTGTATAGTATACTTATATGCAAAATCAATCAAAACCTAAATTTCTGCTTTACATCCGTCCA ATGTAAGCCAATGCAGTGTTTGATATCAGCTGGTAAAAACTTTCCACTCCTTATCAATAGTGCCTCTAAT TGTTATATTCATAAAGTTCGCTTCAAGTAGTAGGGCTTGATACTTACTTTGTGATATCAAATCACTGAAT AGTACAGCAGCTACTCTTTTAAAACCAGGAGGGTGTTTCACAAAGATTTAAGTATGAATTATAGACGCTC TTAAATGCCGACACGTACAAGATATGCAATGAGCAATCTTATTGATATGCAGTAGTGTGCGCCCTTTGCT TTATTTGACCAATGCGGTCATGCCTTTGATACCACATGCAACTAGACATTTAAGTGCGACTCTAAGTCAT CCTTTAATCTTTGTGAAACATTTCCCAGGGTAATTATGCTGCATTATTGTAGCATTATTATACACAGCAC TTCCTTTTCACATGCTGCTTTTCAAGAAACAAATACATTGTATTCAATATAATTATTTATCTTTCATTTC AAAGAAGTTTTTGATTCTCTTTATTTGGAATCATTAGAATTGCTTCTCATATTATGGGGGTATAAATCCA GACCATTATTGAAATCAAACAATTTTCAAATATATTGCCATAATCACATTTTATATATTGTCTGTTCAGC TGTTGGGATCACAATTATTTGATTAAAGCAGGTTGGATTTTGGACAAATATGTCAAAAATGTCTATACTG CTGACTCCTATTCATAGCTGGGAAAGATTTGTTGAATATTCTCCATTGATTGTTATGTAAATAAAACCTT ATACTGTCAAACAACTT
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???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
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BLAST time is limited to 30 seconds