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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041625411.1 PREDICTED: Lytechinus variegatus coiled-coil domain-containing protein 180-like (LOC121428642), transcript variant X3, mRNA CTAATTTTGGTTCGTAACCAAGCAACATCGTCGCTTCGATGAAAAAGAGTGTGAAAAAGATAAGAAAATG TTATGTTCTCAGTGGATTTTTCATTAAAATCATGGACTGATTGAATTGCTATGTGACAAGAGTTGGAGCT TGGAATTAAAATGATGGCAGAAACCAAAGCAGTACGAGTCGTGCCCTCGGGACATATCTACAAACAAATA TTTGATGCCCAGGTGCAATTAGTCAAGACACTGGAGCAAAATGATCACCCTCGCCAACAATGTGAACCTA AGACCTTGTCTGTCCCTTTGGTTCATGAGAACCGTGCTGAGATGGGTAAGAGTCTGCTGCCCTCTAGAGA TGTAGATTGGATGGAGAGTTTGCCAAACAACCAGCAAACTGAAAACCCTGTCCTTTACAAGCAATCTGTT GAAAATGCTGATAGGAAAGCAAAAGAACCCAAATCAGTCATCGCAGCCAGAGAAGTCAGAGGACTTGCTG ATACTATTGAATCTGAGAAACTTGGATCAGATATCATAGAGAGATTAGCAGAGAGTAGGAGAGTTAGACA TGATGAGGCTACTGAAGATCTACATCATGAATTCACAATCATTTCAAATGATATTGAGCCTAAGATAGCA GCCAGTGGTGAACTTCTGATCAAGAAACTTGATGACAATGATAAAGAAATTGAGAAGATGCTTGCACGGA TAGCTGATGATGATGAACTGAAAGATTATAGTCTATCTGAGTTGGTGAGTCTATGGGCACAGATAGAAGA ACAAGCATGGATAAGAAGGGAGTTTATCAATGAAATGGATGCAACTCTGACTTCATTAGAAGACGATAGG CTAGCCAAGCTGAAAGACATCCTAAAGACATACGCCAAGAAGATGGAAGGCATTGCCTATCTAATGCCCC CTGACGTCCAGAGATTGATTGAGAAGGAATCTACTGTGATCAATCAGACACTGCTCATAAACAGAAGAGC TTACACAGATCTACATGCTAGGTTAATGAAGACTGACATTGAACGCGACAAGAACCATAGAGGGATCTGG GAAGATAGGCTGGCCGACTGGCGCAAGCTCAACATTGAGATTGCTGTCAATAAATTCTTGGACTTTATGC AGAGTGATCGTATTGTAAACCCTTCTAAGGTCAATGTACTTTTGGAAAAGCTGCACCATGAACAAGTTCA ACTAAATGTTGAAAGACTGGAAATCTTAGCAAAACTCAATGAAATGAAGCCTCCAAGATCGACCAAGACT GCAGCATACCAGTGGAATAAAGAGATTGTGAATTCTTGCCAACGTATTGAGCAGGTTCATGTGACTTACC TTGATGAGTTACATACAGAATATGAACAGGTCTGCAAGGAATGCTTGGATATGGTGGAAAGTTTTCAGAG TGAACTCTTGGATGCTGGGGTCTGTACTGAGGAAAAGGTTGTGGAGGTCACAGAGGAACGGATTCTACCA GAAGTCGGTCGACGTCAAGTCTCGTTTGAGAAGGCTCTAGAAGAAATGGATCTCTCCCTTGAGAGGTTAG CAGAGCGTCATGCCCAGGAACTCAGATCACTCTTCAAATTCACCCAGGGTGCGGCTCACCTCTGGGACGT CCATGAAATCAACCTTGCTAAGAAAGAGCGCCAGCTACAGGAACAACTTGAAGAGTGTCGCAGGAAACAT GACAATCTCAACCAGGACATGGAAGCTAATCTTGATATCTTGATGGATAGATTGAGACAGGAAAGTAGCG AAGAAGCTCTTAAAACAACCATGGATAAGGCACATCAAATGCTTCTGAAGATTCAAGATAGCTATCTTAA TTTCTATGAAGACCAGGAGATGATAGTCCAAGGCTATCCTAGTATGGTACAAGAAGAGCTACAACGCTAT GATGACACGCTCTGCATCTTCTTCGGGGTCGATAGAATTAATCCCTTGGAGAAACAGGCAGAAAGTAAGA AATTACAAGAAGAACAGGCAAGCAGCATCAAGAGTCAATCTGATTCTCCAAAGTCCTCTAGGGCAGGGAG TAGGGCTGAGAGCAGGACTAGTAGCCAGGGCGTTAGAGAGACCAGCAGCCCGGCGGGTAGTCGAGCTGAT TCCCAGGCAGGCAGCCAAGCGGGAAGTGAAGCAGGCAGTCAACCAGACACCTCCCAGTCTACTAAACTGG GGTCTTCCAGTCGTTCACGAGACAGCCCCTCGTCGTCTCCAGCCCCCAGCCAGGAACCTCCTATTGTCAC CGAGGTGCTCCTCACATCCAATGGTACCAACTTCTATGTCCTGACGGTTGCAGGGGAGCATGGGATCACA TCGGATGGGGACCAGAATGAAGGTCAGGCGGTGTCTGAGGAGGGTCGTCCGGTATATCTAGTCAACGTCA CCATCCCGCAAGAAACGCTCAACAATCTAAGAAAAACAATGAGGATGTCCTTTCTGGAGCACCTTGAGGA ATGGAAGGTCTATGCTGTAGAGAGGGCACACAGTGTAGTTGCTGCTAAGACTGAGGAGCTAAAGAGTGAG TTAGACCTGAGGCTCCATCTTCACGAGCCCCGTTCACAGCGCACAGAGCTTGACATACACAACGTCCGAG CAGCGGAACTTCTGCTTCATCAGGAACGGGTCAGCAAGCATTCTAAGGGTGTGTCTTGCGCTCTGTCAGA GGTCAAGCAGCGGTTTGCTACGATGCAGAAAGAGCATGACGGCGTCGTGGAGAAGTTCAAGCAAGAGATT GATACCATGGAGAATGTCTTTGTGAATGCCTCTAGATCAGCAGATTTGGTATCTCTATCTCACCAAGTGA ACACCAAGGTTGAGTCTCATATGGATGTCATCAGGGCTTCTTTGAGGCAGTTCAGGACATACCTTGATGA TACACTGCAGATGCTTAGGGAATCCAATGCAAGGTTCATCAAGTCTTTCAAATTATTTTCTGATGGTGGT AACTTCTCTCCCGAGGAGGTAGAAGCTTATAAGAAGAAATTAGAAAAGTTAGCGACAAAGATAGATTCGG CTGAAGGATTTGTGATGGCTGATTTAGAAGGAATGGAAGCAAGGAGATTGGCACAAGCTACTACTATAGC TGGAAAGTTTGAGGATAGATTTAAGAGTCACCTGTTTGATCTGACATTCATTGAGAAGCTGAGTAGATGG CTAAACAACACACAGGTTAAGATCAAAGGAGAGGTGGCACAGAGTAATACACAAGCACAGAGCCTTATGA GACTCCTTAACAAACTAGAAACTAGAGTAGATGCCTGTGAAAGACCCAATCTAGACAAAGAGCAAATAAC CCCTGGTGAGCTACTTGAGACGTTACCATCTATCTTCCAAGCATTTGATGAGAGAGCTCAATACCTAAAC TGTGCTAAACACCTGTTGTTGAATGCTCCTCCAGCTAACCTAGCTCCATCCTCCAGAGGCAATCAAAACA CAACTCCAAAGGTTGTATTTACAAGTGAGCAGCAGCAGCAGCAGGGAGTAGGAAGCCAACAGACATCTGG TACAGCTATAGCTCAGACACCCATGACATCTACTACTACAGCAGCACTTAAAGCAGCCAAGCTACAATCT GAAGATGCTGCCGTCTCGGTCATCAAGAACATCCTCACATCTCAAAAGCACAAGATGAAAGGCCAGGAAG AGGAGACACCATTGACGACTCCATCTGTATCTAGACCCCTAGCATCCCAGCCAGTTTCTACTGCCGGAGA TGGGCAAGGAAAGGGTGTAGCTAGACCCCCTGCGAAGCTTGTTGATAAGGAGAGGTCAAAGGTCAACCAT GTGAAGAGAACCACCTCTATGACATCGGAACACAACCCACGGAGAAGTGCTTCTGGAATTCAAAAGAACA AGAATAATGGTCTCAAGTTTGATCCCAAGTACTACGTCTTTGGAGAAAAGCCAGAAAAAGAAACTCATTT CTTAGCTTTGATAAAGAAGACACTACAAGATGCCTTGGATGGTCTACTTACCACTGCGGATTTGTACTAC AGGCAGAAAGGAAGCCGTCCTGTGACCAGACCACAAGCCATTCATGAGATCTTTGAACAGTGTGCTGATG TGATCGTCACTAAACTCCAGTCTTACTACAAACAAGCTGATGAATATCATAACCAGTGCTTACAAGAATT TCGTGAGCAGCTTGAGAGGCTGGAGATAGAAGTAGCCAAGGTTCCATCGCTGGTCATCAAACAGCTTCTT AAACATCACATACAGAAAGCTAATGGTTTGATGAAACAAGGTGGAGGACAGTTCACACAGAAACTTAGCC AGTGGGAGAAAGCAAGGACCCAGCACAAGATCTTACTGCGCCCCACCCTAGGGCACCCACACAATCACAA TGAGCTTGTATCGTTATGTGATCAGGAAGAGGAGAGGAGGAAAGAATTCATGGCTGGAGTGGACGAGAAC GCCAAGAATCTCAGGGATGCTATGAAAAGCTGTGGAGATGACTTTGTGAAGCAGCTTGCTACAACGACAG AACAGCTTCTTATTCTTCTTGATTCAGAATTAACAGTAGATGACGTCATTACCGGCCGGGTGGATCCAAA GCGTATGAAAACCAGTGCCTTGATGAGACGCAAACAAGCAGGACTCCCTCTAGAGGACAATGAGTACATT CCACTCATCAAGCGTGGCACTCGTCAATGGGAGGGGCTTCCCCTTAGTATTCAACCAGAGCCGACACCCC CTCCTAAAATAGAGACACAGACCCCTTCCCAGACGCCATCTCAGACTCGCAGTCGAAGCAGACTGGCTAA GGGTAAGAAGGTAGAGGCTGAAGTAGCTCCTAAACCAACTACGACTGCAGCAGTGACAACACAGAAGACT ACACTGGCCCATCAAGCAACCTATGATGCTAGGAATCAAGCTTTTAAGCAAAGCACAGCTGACTACGAGC AGCGGTTGAAGGAGATCGCTACCAAGCAAGAAGAACAGACCATTGCAGAGAACAGGTGGACAGGTAGCTG GCAGACGGCTGTCCAGAAAGTCAAAGACCTCTACTAGAAACACTCTATGACTGTACCTTTTATACGCATC ATTGGAGAAAGTCTGAGAACTCTAAAAACATTCCTCTAATGTAGTTCTGTGGGGTCTGAGAAGTGCAGCA TTCTGACAGTCCAATGGCATTTAAAAAGATTCCTTTGAAGTGATCCAGCCTTATCTGCAAAATTGCAGCT TTTGTTTATACAATATTCTCCTAACCCAATATCAGCTGTGAGAAAACTTGATTTGATCATCCACTATTTG GTTTCATTTGTGATTATCTCCTGCAATGAGTGTTTTTAAGTTTGGTGTCGGTGCTAGCGTTGGTGTGGAA TGCATAATTGAATTTGCTTTCCCCAATCCCCAACACCTAATTAAGTTTGGTGTAGGTGCTGGTGTAAGAA GCACAATTGCCTTCCATAGCTCTGACAACAAATTTCAGTTTACAAAAATCAAATTCAGACATACTTTTGC TCCTCCAAATTAGCCACAAAATATCATCTTAACCTGACTGCAATAATCTAAAAAATTTTGTGCCTCTTAC AATGCTGTGAATATGGTGACTATCTGTAATGACGTCTGTATTTTGCCTTAACAATTGTTATTGAATCAAA GCTAAAATACTTTGTTCCCTGTATGTACTAGATTACCTTGATATTTTCCATAGATTAACTTATATATGAT GTACATATGTATATATTAAAGAAAAATGTTTCTATTTAAAAACTTGTATAGTATACTTATATGCAAAATC AATCAAAACCTAAATTTCTGCTTTACATCCGTCCAATGTAAGCCAATGCAGTGTTTGATATCAGCTGGTA AAAACTTTCCACTCCTTATCAATAGTGCCTCTAATTGTTATATTCATAAAGTTCGCTTCAAGTAGTAGGG CTTGATACTTACTTTGTGATATCAAATCACTGAATAGTACAGCAGCTACTCTTTTAAAACCAGGAGGGTG TTTCACAAAGATTTAAGTATGAATTATAGACGCTCTTAAATGCCGACACGTACAAGATATGCAATGAGCA ATCTTATTGATATGCAGTAGTGTGCGCCCTTTGCTTTATTTGACCAATGCGGTCATGCCTTTGATACCAC ATGCAACTAGACATTTAAGTGCGACTCTAAGTCATCCTTTAATCTTTGTGAAACATTTCCCAGGGTAATT ATGCTGCATTATTGTAGCATTATTATACACAGCACTTCCTTTTCACATGCTGCTTTTCAAGAAACAAATA CATTGTATTCAATATAATTATTTATCTTTCATTTCAAAGAAGTTTTTGATTCTCTTTATTTGGAATCATT AGAATTGCTTCTCATATTATGGGGGTATAAATCCAGACCATTATTGAAATCAAACAATTTTCAAATATAT TGCCATAATCACATTTTATATATTGTCTGTTCAGCTGTTGGGATCACAATTATTTGATTAAAGCAGGTTG GATTTTGGACAAATATGTCAAAAATGTCTATACTGCTGACTCCTATTCATAGCTGGGAAAGATTTGTTGA ATATTCTCCATTGATTGTTATGTAAATAAAACCTTATACTGTCAAACAACTT
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds