Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XP_041468481.1 baculoviral IAP repeat-containing protein 6-like isoform X3 [Lytechinus variegatus] MAAAVGWSVEEDGSLSVGEQTVGIAYHPRLNTVLAVTAEPSIKVLDVNSGVILKKSSLSAPASRHVECRY LSGSDQVFLTDGYSVGLRKDLGGVLLLDSALQTSVTDTNNDVMVEIPYSEASQLLACLRKNKIANSETVM ESIEEELERYKLPNDHAYHKTTKWATVHLRLPHATLKKVINALVVELSRTHQRVSALPICTAILDRLQRL YPDGQEPLVVGGDNTIEKSQMYSEATRRQTFAQWPHMDYKWALPEPMAQAGFYHQPSSIGDDRAMCFTCS VCLVCWEPTDEPWSEHERHSPTCPFVRGEPTHNVPFSVTLSTGPAHSHSKTEKISCVSEGNTSSLMATST ESGRVCIWEVHEQLKLATRFIVNPKDPIFKGQAPVIMDTEPVKAVKQAWMTPEVPVSGTSSSSSSTISTS SSTSSGSTGHVPMKDELAPVNSPKGVPETSSKTDELKPDPSVEESEREKGAFGSLEVIEVSGAWKSSDNE KPECNGPLTANEGIPMHNAVPAVGDEEPSDSVAVSALGMLNASKLPSIATIGTPDMSFPCLVAGVSIRKE DQEQTSNSKEEVRSNSVIETDNFIDLDGPGGDENGDDAGTGGAPPKKLKFADAYLGDSVDGDVDEKIGNK VAYVNYLVVYCMMYKGKSLPVVKKPGEKASSSSGFHKTQSMYFSLSQETQKLDLDDDELGYSDLEDPLNF QFSPMVNNNPPPVASGSGSVVSKQVSMSVKAVQCVELPEAVQTNDYVVTSVRTSLDEQYLMVVLSPHSGK MFEREAIDGGVDKQEKVDPVSISTESTTESVQNDLNKESSSFMMMSNEDCGISVDEVDTGPCSSGTDDAD SRTNHQHFVKDGPPKASSGGFLVIYKLKRAGQMISIEKEPCHIHRIASPEDSLSYLTPLPSGVTDASSDE DEVDQYMNSSTDNMDKDETDSPSSPSIGKWTALTQDGHLIVFDAASFSVLLSILPSHFDFTLTSSGAEDK TNSYIALTYCTGMERLCVCTGGGKISFLQLDDGESSIKVNSGADQKDSGKTAILDSRLTANIDKSSKEFI INSNLTISALHTLHQLTKFEILVPRFSATVPPSWTEIQQEQQQRRHPQHLHQRQQGDALQHTRTWKLQPD GSTSQEHLFEIVLPRICAVGHIDIKFSLLPFCTVPPGIQVTLLQQSEKYRAGEKEKMNIKSTPIDAHINF NMNAGSSARSKEPKEQNLDVPGLPPPFLGALGTDDAGIDEAGPSNRQPPPSQDGQSTQSSGQRSALTESS FLRRHREDVLCGPCGLELFVDTPSHTGTVMLTSKDLMLWRGRSFLLHIWTSDEGSAEGATNGRSKAASSD QASSFVPQFHTNVDLADRLTTVQLRKDMEKYTGCDWIQELSITVCKSKKVNLPKERFQRALMVESSNFHQ DLLNTVIASSSLSSSLTEHKQKQILAFDVLCWVAGVHITEPERPSDLVEAIQYILPDIIKICYLEADRSL AHKCSRFLALCLGCAKRNPNPDVTASFQKALLDSLLHWLPTIALAPSSGSLHWFFVILGLVKQADYEAVS GGCMAMLKAAARQLDEATLPQHVVLRAKFGYYGTPLEPNLFDVEPPRPPSKLDSTGPSTTSTGTTTSSSV PLPQIWTEVGPYGSHQGLPVVLGGGGAFDIGAEPGTKGMSLRGKGSLGGIVGVETGDGSLTSGGYFMKGL LEVEPLHFACCGMSDGAHIERIGGGIHPASSVHPVPQGQGGKGNTAQPGNPPTPAYLATLTNAMATAEKQ LQKLKEKTKALVQLKKYNYIPGQSSKGVGEPSPKNSPLFMTPPVSPPSEPVGQAPTEQPPLLYSIPDDEC GLHGQPGEGSQGGKSSSKSSSKDDLKFELDDGVPSSASLVRNLLHPPSSHMLVIERMHSGARRYAVLDFG RPIVLTDVYIPACSDLTSLSVDIWTQLEEVDGQRLAVAMDIESRDLVLNDLLPPPVCRYLKITVVGNYGS NSPKSKVPLGTFYGHSFIHQEMKPRDLSDPALVELQKEQYVGLAMAILDDIQCRYSLATSRLQKLLQAYE SYHQTENQMDGSYTQTREKVDTNGSIRKAYVECVQLQQQLNVVQRTILRLRQKQHQQPYTMTPITSPALA VKNTSTDALRIMCEHLLEVLLSTTQGAMALPVSLCCALDAESCKSIFRHLCVMGTPRLSLLTGTLLVRVC GSRQWWGEFLAAALKEFFQSDQPTMFPQDRVFLLLTSLGQTSLASSNASSVLEDLLRLLTELLSPLLGNQ FVSSYGSPEGSLDLPLVGWVLLFLSRVLDHSSGSHGTGQSDNTQDTEGGATAAGASGGATAMPDNHHTDK GGAGQGGAGGGSNRWDFLTSQLQAPGNNPQRSHSSGRDVVRGVKKQVQSHKDLLYDIKGGKKSSQAKYGE DSKGDPISDFHLKKKLYHQKYHLGVKLPVSSYEVRNVLRARMAARSARGQKTVQGGSSRGTADGGSSSAG DLVSTILLTRDKCIPVVQGLVRLLLAMDFTCHVDLFLVTCKVLARIANATRPAITLAEIMSQDELIQLVS RFCSSEYCAGNSAWGGPWPSHAITCLLLDILEGERLYPYVEEPAGASGGTTFTPPMGATGTDPDLIADSL TSGGAEASAPTESETEVNNASGGEYDSGGNGGEAEENEGLEEPLIIDELSGDPEIVGEGGNDPLVDMDLL FGSWKTSGGLFGDNAPKKLAQKSGAGSMVDPVKIPTSALLAYAKKNRKDKLKILVRGDGRESSGSAFTPR MSSAVDARLDQDLEMSAEWFLKMSSLMEAETVSQTFTSLPPPPAFAPEEKPDVELLDMGQTDDDLAASRA MSGSSSNIHPSVRSSRDLISTCFHHLFAGLESDRIRLHSLLQLWLTINEGSISDTDGNTSHFNDSRVPNF PLDKPSISHLLATLRKERNLSVWTWCLAFRVLTVQINTRGSTKDAVSVANSMVNDPNMFHALFKFLSGGS FQGRRSGHQDFQVGPTVTLAFHQLLLRLHLRVFSGPSAGAKALKNLLLRVVRTLVQPREAISEGVGPLDA QITFLELILEQTFSSTDLGSIATMVDNITLLIYEHVIDGSGVTQLSSENGGSSRANLANALAGKLKAGAS RVLHNENSREALMCGLLQLVNELLKMSVSPDPFGTSVWSPVGGRGSLHSGGVAYPTPPTSMSDDDKERTG DVSGLSAAASSAFASWSAAPQSQPSTPLRLADLVLTNKETVSNLLFALGHSSSMAMAAMLNPGFFSQGSE PLMSTEPLSIGDHIFQILATLNKEASHVRIVLQAILSYLSCANGRRGEMLSEPLLWYTLSVLNSPTAMDS MHEIGGIEIICANLVNSSRASIDPNPSIISPIMQLTCPPKPPSSSNTSSSSSNTNTGFTKRGSTTVDEEN VEGLTNFAPYGVISCSNMTTRPAESLLLPTLSNRRSRQSWAHTFSSEETWCDLTITLPSAVVLEEIHILP HVTNLATCPSAVSVEISPSGSSTIPVCPPLATSGLTSIKLKMPRPMVTSSVCLQLRRPRESTLMALTRIR LLGTTVLGGGHTGGSGGITFSHMNGVPMVPPTAPHNVAEDEAVRGSTRWLRLLHHCLAGTFLSSTVSSIA QTAAQTPGLLTTCMALLASPHCRPNRRDIESLLLQLSRSRTEVGLTLVDMFLRNNYCFGHGEHDSGLGLL GRPSSLASDSSVDIIYQLGTGSDPGTRERVQTLLDWLGDTARVALHMHSSYHRAPRTFSPIESGLLHPAP IHVHCVAAVLWATHSQNNVQHMVNMIPTELFSSIYEWSTVLPVNSALKRAADFVLCSMCMIQPAHFDSLL QWMGVMVGGPVELQAPITDDSKEDELNILLTDDSKGANLQHQSQPNLHLPTSQPITRQEFSHVIIDEAHL SLLALACQSDVATKRLLDSQFLVLLAEALSEFCTQELIRTESLNGFNDPLTDASKLKASGSRVQSPRSPR NSARRESTESLPSDATVVLTADLVAPVLNFFKDLSAQIEIKNWLASPEGVVFWAPLLALLCTSNTVTLLS SMPNLNGVPRRSHLLSASQRASLENASIAFFSRCTLCHPGNQKLLAQVICDVICTQDLQTGSPFVISGFM RRLILQLMLEDESVSVAVSSVCQLVKGPQSWTGRIIHPSLGLGHKNMLVETKLTTTCTQLITYLTDTLGL KNLPGDKKTKPSTDSSKTDKQSFVMVNLSPDKLDVTETEINGNIGNSIVPPSTTASTAGSSTSGGATGGA ASGATVSTTAGASAGASPSAASSSASTSASSSTKQPEKFLLYPGATNFPASMVPTLPPELLPKSMDRWAP FFNTFSNPAASMAGAGATSFNMPGLVLSHERLGSQNFPGHMTIGQAITVLQRRGLPDGYPTLEMNIRMST SLLGASKTDSSKTQEAQEGRNESGTSTSSNEADQHIPEDVLLDTPPISSFLEVFAHLGGLALIAEHLPQL YQDSPLAQQQQQVKQGAQTSAGGSSVDKMTASGGGASAAMHSSWWKYSSDLGMKDLGEFDDYEVLMEGPH STTISSVGGGSTLASTLTTTSNVPSYPSYGIGSTAAQLQATSFSNIVPLHTIPMTTTSSSSSSSSCPPQG STTGQSVGSCTAAIPPHSLAAFGLFLRLPGYAEVLLKEQKKAQFLLRLMLGVTDDGDGGQILSSPLATSL PTLPFTVLVTLFDSTPLTTDDGVLLRRMTLEIGAVHLVLACLSVLSHHGPRGSSQPATGEGGPAPPNGSQ VGGVNDKNQNFWAKGTGFGTGSTTSGWNVEEALVRQKAEEEHVTCLLKVLSSYINPVNSTTSSSGSIDEM SGDLNHDQLTTIFPSVFIELLTQSCLIPAISSYLRNDSVLDMSRHVPLYCAVLEILRALALCPLLVHLLL PQGDNGDKSVIKLLENMKGCVDTYTSKLKLVKPSKKSSSRHSSTKESSTISKEEEAEAEGLTQLVPEIQR TVEMVKKLTSKILAQRQGELNDLEGAGASASGLSNSNGSKNQSADQRYIAVMTDLQFDTFQMVTEDSKGK IQFAVPHHYASNAKSVGNVTNAARARRLAQEAVTLSTSLPLSASSSVFVRCDEDRLDVMKVLITGPSETP YSNGCFEFDIYFPADYPNSPMLVNLETTGQHSVRFNPNLYNDGKVCLSVLNTWHGRPEEKWNSQTSSFLQ VLVSIQSLILVSEPYFNEPGYERSRGTQAGTWSSREYDANIMQATVEWGMLDMVRNPPPVFKDVVQAHFY LKRAEVMAQCEEWIALVGQYCNDKRVGRSMLHHWKNLKKHTAKLREELNKLQPPEFLKEQLESESEPLPP LSSDATNDVSCASVSEDADKSSENDAEHSGSSSSSQEITTAETSTADSQITEPTYMFGMSLEEAVVYDPV LFE
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds