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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041612129.1 PREDICTED: Lytechinus variegatus ribosome-binding protein 1-like (LOC121418323), transcript variant X10, mRNA CGTAGTCATATGTACTGCTTCCGGGTTTCTGTGCAGTAAAGTCGGCAAGCTTGGTCCCCCCGTTTCTGGA AACCTGCTATGGAGGATTGATATTTGCTTCGTATTTTCAACGCTGGTTGTCATCGACGTCGTTTCCTAGA TTTGTAAATCATCATGGTCGTTGATCTGTACGAACCACAGTACCTGGCCCTCATTGTGTTTGGGGGCTTT GTGGCACTCTCCTTCGTGGTCTACGCGTTCTCGGCTTTTGGAATCCAAGAGAAGTCGTACGAGCAAGCTG TTGCTGAGCAACGGGCGAGGCTGGAGAAGGAGCAGATACAGCAGAGAGAAGGCAAGCGTCAGAAGCGCAA GCAGTTCTTTGAGAAGAAGAAACGTGAGCGGGAAAAGCATGATAGCTCTCCAGGAATTCTGCGCCAGGAG GTTGCACAGGCCATTGATCCTTACGTGGAGGAGGTAGAACAGGCACCTCCAACTCCACCGCCAGTCAAAG AGGAGAAGGTGAAGCCAGAGAAGGTGAAGCCATCGCCAAAGAAACCCAAGCAGCCAAAGCCCCCGAAGCA GTCGCCAGTTGAAGAGACCATCTTTGAGGCCAAACCTGCTCCAGTCCAGGAAACTCTTCCTCCTCCAAAA GAAGCTCATACAACCAAGAGCAAGCCACCAAAGGTTGTCGAGGAGCAGGTGCAGAAGAAGGAAGCACCGG TAGTGGCTGCTGCTGCACCACCCCTAGCTTCTCCTAGCAAAGCCAAGGCTAAGGCAAAGACTGCTGCTGG TGATGGAGACCCCTCAGCTTTAAAGGGAAAGACCCTGATTTCTGCAGTGAAAAGTGCCCCCTTGAAGGAT GCAGAGATCCAACAACTGATTGAAATTCTTCTCAACCGTCAAGGAGGATCTGCATCTGCTGATGACTGGG TCAAGGCTAATCAGAGGAATGACCCAGTTTCTGCTCTCAAGAAACAGCTCCAGGAGAAAGAACAGGCTCT CCACAATGAGATGCTTCTTGCCCAGGCTGCCTCCCAAAAGGTGAAGGAGTTACGTCATGAGTTGAACCAC CAGAAGGAGCATTCAGGAAGTGTAGAGACACAGTTTAAGATGAAGCTTGATAGCCAAGCTCGTGAGATTG AAGCTTTCCATGTTCGTATGCAACAGAGCCATGATTCCCACACCCATGACACCCAAGCCCTTCAAGCCCG TATCAAGCAGCTCCAGACTGTATTAGATGAATCTAAGGTAGATGTCGTGAATCAGCTTAGAGAAGAGAAC AACAGACTCAAGACTGAAGCAGGACATGCTGCTCAACAGAAGGAGCAGCTAATGGGTCAGGAGCTGGCCC GTCTTCAGACGGAGCTTCAGAAGGTCCAGAGTAAACTCACATCTACAGAGGACTTGATGAGGCAGGGAGA GGAGCATCGTAGAACACTAGAAACACAGAATAACCAATTCAAACAACAGAGGAGTAGTGAACAGCGTGAG AGTGAAGCAGCCCTCTCAAAGAGGTTGGCTGAAGTCGGTGAGGAGCTGAGGAAGGCCGAGGCTCATAACC AATCCCTTGCCCAAGCCATGGAGGCTGCTAATGGAGAGACGGAGAAGTTCAAAGGTCAAGTCACAGAGTT ACGTCGTCTAGATGGAGATAGGAACAACACACTACAGGCAATACAGGCAAAATTGAAGGAATCTGAATGC CAATGTCAGAATCTGGAAGGTAAAGTCAGGACTGTGGAGAGTCAGTTAGCAGAGAAGGAACAACAGAAAA CACAGGCTGTACAAGAAGTAGAGAATCTGAAGAAGGAAAAAGATTCCCTCCAAGAAATGTTAAGGACCCA AGAAAAGAGGTCAGAAGCTGAAGGTCAAGAAGCTCCGCCCCCTGCCAACGGCGATGTAACTCAGACAGAC TCCGCCCCCAAAGAGCCTTCGATCCTCCTCAAGGAGCACAATAATTTGTTAGCAGATAAGACGAAAGCAA TAGAGGGATTAGAGCAAGAGTTGAATTCAAGTAAATCCGAGCTTACACAACTGCAGTCATTGATTGAGCA GCAGAAACAGAGGAATAATAACCTACGGGAGAAAAATCGGAAACTAATGGAGGTGGTGTCCGCAGCTGAG CAATCCAGGGCAGAAAATGCCGGACAGACAGCTAAGACATTAAAGGATGAAATTCAAACTGCCATAGTGA AAGAACAGAGTTCTGTGAAGACAGTGCTAGAGAGGTTATTCCCTACTGTAACATTAGAACCTTCACAGGA TAACAAGGACTGGTTGGCTAAATTTGAAGAGCAAGCAGGCCAGGTACTTAGCAGTCAATCTTCTTCAAAT TCGCAGGTTGATGAATATGTACTAAAGGTGAATACGTTAGAAGCAGAAAAAGAGCAATTATCATCACAGT GCCAGCATTACCAATCTGTTTTAGCTGATACGGAGGGAATGGTCAACAAGCTCCAGCAAAGCGTGGAGAC CGAGGAGGAGCGCTTCAAGGGTCGGATCCATACCCTGGAGGCGGAGAAGGAGCAGCTTGATAGGAAATGC AAGGAGCTCCAGGGAGCCGGCGTATCGCGAGGAGGCCAGGAGGCCTTGAAGAGGCTAGAAGATAAAAATA GGGAGCTCTCGGATCAGAACGAGGAGCTGGAGAGGAGAGTCGAGTCTGCGGAGGAGAGGTTAGATGCGGC GGAGGCGAGGTTGAGAGATCGAATCGGAGAGATGGAGAAGGAGAAGGTTCAACTCACTGCGCAGTGTCAT CACTACCAAGTGGTGTTGAAAGAAACCGAGGCGATTCTTAACAAACTTCAGAGTAGTGTAGAGACAGAAG AGGTTAAATGGGAAGAGAGGTTAAATCAAACGGAATCCAATCTAGGCCAGGCTAAATCTGAAGTCAACTC ATTACAACAAGAATTGGCTTCATTGTCTTCTTCCCAGTCACAGTATGCTGAACAGTATGAAATCCCCAAC ATGAAGACCACTGAAAATTCAAGGTTATCCTCCGAGCTCGAGGAGGCCCAGGCCACGATAGAAACACTCA GGCGGGACCAAGAGGCGGCGGCATCGAACTACGAGACGACAAGCCAGGAATTAGAAGAATTGAAAACGCA GCTTCATCAGTTGAAAGAACAGTTGGAAGCAGCCAATCAGAGGGTAGAACAGAGCCACGACAGAGAGGAA GAAAACCAGGAGACCAAGAATAGGCTATCTTCATCTGAAGCGGAAGTGAAGAGGTTATCCGCTGACCTGG AGCAAGCCAAGGCCAAGTTGTCTGACCTGCAGTCAAAGGTCACATCCGCCGATGGTCAAGGTGAAGAGGT CAAAGCTCTCCAGAAACAACTAGCTGAATCTCAGAGCAGGCTGGATGCCTCGGAGAAGGAGATCAGCTCC TTGAAAGAGGCAGCGGCTTCAGCTCCAGCTGGAGGGGATGATGGAGCAAAGGAGAAGCTCATCAAGGCTC TCATTGAGGCTGAGGAGAAGGCTTCTGCTCAACAGAAGGAAATCGCAACTTTGAATGATAATCTGAAGAA AGAGAAGACACTCACCCAAGACCTAGGAAAGGCAGCTGCCAAGCTTCAGGCTATGTTAAAGAAAACCCAG ACAGCTCTGAACACGGAGAAAGACACAGTGGCTAAACTCAAGATGCAGAACGGGGCCAAAGAGGGGGCCC AAGGGAGTACGTCATTGACAGAAAGCCAAGTAGAATTGCAACTAGCAGATGCGGCCAATGAGGAGACGAA ACAAGCCGATGGTACAGGGGTATAGCCGATGCAGTCGTCTCGTTGATACAGCAGCAGCAGTAGCATCACC AGCCCTCCTTTAACGATACAGTGCAACTCATATACACAACGGCCAATACCTTGTTCCATTGTATACACTT CTGCATGCTTGACTCATATCAGTAATAGGGTAGATTGTTATTATTATTACCGTTAGTAATTATACTGTAC TTAAGCAATTCTATGTAGTGCACAGGCCAGGTCTTGGTATATCAGAATAAGAATATGGAGCATCTCTTTT CTAAAGATAATGCCCTTAAAAATATATAAGGTGGAATCTAAAGGAAAGTGGTATTATATAAAGAGGTTTT TATTTTGTTCTAGCCAGTGTATGCATTGATTCAAAGTAATACCCTAACAAAATAGTAAGTAACATTGAAA AAAAATGTTTATATTGGTTAAATAGATGAAATCTCTAGTATTTTTTCTCTCTTTTCATTTTTGTTCTTGG TTCCATGTTTGGTTTTTTTTTGTTGAATAATTTTCTTAGAGCAACAGATCTCGGTAAGTTTCTTTTCAAG ATCTGGGAGATTTCATTGTGATTTATTTTTGTTTATCTTTAATAATTAAACGTATAATCATTCTTTCATT GCATCCATTGAGCTTCCACCAATGTTAAAGAAAACAAAAACAAACTGAACTGTGATGCACTTTTCAAGGA TGGATCAGAACTTTAAAGATGCTCTGGGTAGATGTTAGATATTCTTTGTATTAATCTTGCAAAAAAAAAA GAAAGACAAGTAATGTATTGTAGCAAATCTAGATCAATTTGAAAAGGAAAGAATGTCCTGAAAGTGAATG TTGATTCACTGCCATTTATTTCAGCTTCTTTACATTCCTGCACATAAACAACTAGGCCCGTATTCTGAAG TCAGGTTTGACTTAAACTCAGGTTTGAAGTTGTAGTTTAAGTATGGACAGCCAATTGTTACATAATCACG AACAGTAGATTTATCATACTTTCAGCTCATTTGTCTCTCAAATCATTCATAATTGTGTAAGAAGTATAAG TAGATGATTGTCGTCACCATCGATGAATCAGGAAAGAGCACAGTAAACATAAGAAACATACAACTTAATA AAAATTTTGATATTTTTGGCTTCCCATACTTAAACCACAACTTTAAACCTGAGTTTAAGTTAAACCTGGC TTCATAATATGGGCCCTAGGGTATATATTGACATTTCATAGATCTGGCTAAGATAAAACAGTGGATGAAA TTGCCTTGCTTTGTGAAGATTGCTTGATATTTCACTTTGGCATGAATCTGTTGAGGTCTTTCTAGAAGGT AGCATTATGATGGGTTTATATTTGGGACCGATACCTTTCCCCATTTAAATGAAATGGCAAGACACTGTCA AGATCAAGAAATCATAGCATAACGTTGTAATGAAATGATAACCAGACTCAGCAGTGTTGGACTTATTTAA TTCATAATTAAAAATCATTTTCAAGATATGGTTTTAAGTTGGTGATGAATGAATAGATTTGAAATCTTGC CTGCTGTGAATAATGCATGTAAAGTCAAATTCTACCTCTGTATTTCACTAATATTAGGAGCCAAGTTTTT ATGACGATATGGGTAGATCGCAAGATGGGAAATAGGAAGAGGATTAAAACCTACTCTTGCATACTGTAGT GCTAACATCCACTCACACTGTATGACAGTGCAGTTGTACACATCGAGGACATATTCCTCACTCACAAGAT ACACTTATATTTTCCAGAGAGCACTGCCCAATGCTGTTCACACAAAAAGTGCACCATTTATTGTCAATAC ACTAATAATGTCAAGAAAACAAGTACACCGTAATGTGATAGCATACCGTGGAAGGATTGTTGCATTTCAT TTGCATTGTTCTTTAAGCTGCCATCTTCCCAACTGCCAATGTTATTAATAGTAAGGTCCCTCATAGCTCG TTCCAGAATCGAGTGGCGTGTTCCCACTGCCAAATTATTAGATGCTAAAATTGACTCAGCATGGGTGGCA AAACTTACAGTAACACCATTGTCTGTAGTAGTATTTACTGATAAAGATTGATTTGTCACAAACAATCGAC CGTGAGAACAACCACTCCATGTTTGTTGAAGTCCTTGAGTTTGTTTTAATAGATCCCCTTCCCAAGTTTC CTTATTTCCTGAGTAACCTGAATGTGTAGTGCTCCCTGGTTTGAGGTAGATTTTGCAAGAGCAGGTTGAA ATGACGATGGTAGTCGTACTAAGAAGATCTCGTTTAAAAGATGACTGGAAGGTATCAACAGGAAATTGGG TCAAACCATGGATCAAACCAAAGATAAGAAAGGGGATCATACAAGGCAGGGTGCTACATAAGCACTTGCC CGATTGCCCGGGGCAAAGAGTCATACAAGTATTTCGAAGTAAAGACCAAAACTACTTGCCTGAATTGGGC AAGCAATTCTCACAGTAGAATGACCAAAATTAGGGTTGATATGATATATTGACCTTAATTTTGGTCATGG CAGGCAAGATAAAATCACTTTGGAAAAGAAATGCACTAACAAAGTAGATCAGTTCATGTCAAAAGAGAGA AAAAGGTCAATGGTTTATAAAACCACAAAATTTTCTTTTGAAGAGGTAAAACATTTTTTCTTTCAATTTT TTCAGGCTATTGTAATAGATTTTTAGGCAAGTATAATTCAACGATTGAAAAATGTACATGTCCGATTGGG CAAGTGCTTCTAAAATGTTATGTAGCATCCTGTACAAGGCTTAATAGGACAGGGAAACAGGGCTTATTAA AGAGATAAATACGATAATGTGAAAATATGCTTATTTTTAAGTTGGTACTTTGGTATATTGGCAGAAAAGG GTATTCTTTAATGAGATGAGACATGAATATATTCAGATCTTTATTATTATTATCATTTTCAGATGCGGAT TCACGCATAGACGTGATTATAAGATGAATTTTGAGGATTTCAGATAGTTGAAGGAAAAAAAAATCATAAC TAAATTAATTTTGCTTGAATACATCGCCAACCTTCGTTTTCTTCTGTTGTCTTTTTGAAGGATTAATCTA GTGACACGTCGTCATTTTGGAATGGGAAGTTTGCATGTGAAACGGAAAAGCATTTCTGTATTCTCTAGTC GCCCACTCCCTTGTAACCTTGTATCATATTGAATGTGTACCCTAATGCAAAGATTCTTTCAAGTGTAGTG ATGAAATTTGTTTGGATATGGCAGAATCTC
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???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
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???blast.wordsize.5???
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???blast.wordsize.8???
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???blast.wordsize.10???
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???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds