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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041604448.1 PREDICTED: Lytechinus variegatus paired amphipathic helix protein Sin3a-like (LOC121411637), transcript variant X1, mRNA TACTAGTTGAAATGTTCTTTTCTCTAGCATTGTATGGCATATCTTTTGATCGCAGATTGGATGATAATCT TTTATATTTTAGCAAGCTTTTCACAGCGGAGACCATAGGAAATTTCGACCCGAACTCTCCCTGTGTTTTG ATCGTCGAGCGTCCCGCACTGCCCAGCTGGTGAGGTTGTTGTATTGGACTGCAATTTTCATGGTTGTTTC TTCACAGGTAGCCTCATGTTTACGTTATTTTAAAGGTGGATGGATAGGAGATGTTAATCACTCTGAATTG CGGCACCTTTATTGTAAGTTATATATGTTTTGTCAATGCGAGAATACATTTTCTTCGAGTTTTGGTGACC AAAGACGTGAATTACGTCCCGACGTCCGACTTGTTCTACGTTTGTTGTGCACTGTCTTCGCGCGATGTTT GACATGATATGTGTTGGAAAATTGTAAAATTTTGTGCGTTGGAATTCATCTTAGCATTTCAATTTCTATT CTTATCAGAGAGGACTCCTAATAATCTTCCTCTGGTTGTCCCTTCAACATAATGAAACGCTCTGGTGCGG AACCTCAGGAGAGTGCATTCCCGCAGCAGCGAGTCAATACAACGGTGCCTGTTGAGAGGGTGATTGGCAG CCAACGTATCCCATTGCCTTCATCTGTCCCGGTCTTCGAGCAGGCAGTACAACCCGAGAACATGGCTAGT GGTTTACATTATCAACCTATGCCTGGATATTCTGTGCCACCAGTAGGACAGCCTGTCAGCCACCATGGTG GGGTACACCATCCACCAAACCATCCCCATCCACACGCTGCATCCCAACAGGCTGCAACTCACCAACAAAC CATCCATCAGGCTCAAGCACAGTCTCAGGCACAAGTTGCTCAGGTACAAGGCCAACAGCAGCAGCAACAA CAACAGCAGCAGCAGCAACAACAGCAGCAGCAACAACAATATCAGAGGCTGAAAGTTGAGGATGCTTTGT CATATCTCGACCAGGTCAAGCTTCAGTTTGGAAGCCAACCTCAAGTCTATAATGACTTCCTTGACATCAT GAAAGAATTCAAATCACAAAGCATTGATACCCCTGGTGTTATCAATCGAGTTTCCAACCTCTTCAAAGGA CATCCAGATCTCATTGTTGGTTTCAACACGTTCTTGCCTCCTGGATACAAGATAGAGGTTCAAGCGAATG ACCCGTCACAGATTAATGTCAGCACACCTGGAAACCCAATACCAAAGCTTCTGACTGTGACGGGCTTACA CCCCAACAATACACCATCCTCTGGGCCAGCCAGCAGTCATGGGTCGGTGGTTCAAACCCAGACTCAAGGA CCACCTACACAGAGCTCCCAACCGCAAGTGGTAACACAACCAGCTAAGCAAGCTTCAGGAACATATGGAC AGGCCAGTATTTCAAAGGCGAATCTCCATCAGATGGCGAGTGCCGTTCCCATTCAGAACCAAGCTGCAGC TGGAGGACATACCTACTCCCAACCCCCTCCCCCTGCTGCCCAGACGAGCCCACAACAGTCACAGATTGGA CATGTTGCTACTGGAGGTGGTGGGGGAGGAGGAGGGGGCGGTGGAGGTGGTGGAGGAGGAGGTGGTGGGA GTGGTGGTGCGGGTCAGCCAGTAGAGTTTAATCATGCTATAACGTATGTCAACAAAATTAAGAACCGGTT TCAAAACCAGCCTGAAATCTACAAAGCTTTCCTGGGCATCTTGCATACCTACCAGAAGGAGCAACGGATC GTCAAGGAATCTGGTGGCACCTACCAACCTTCCCTATCAGAAACGCAAGTCTTCAGTCAGGTGTCCAAAC TGTTTGAAAACCAAGAGGATCTCCTCAAGGAGTTTGGGCATTTCTTGCCCGATGCGAATGGTGCTGCTGG ATTAGCGTCCTCCTTTGGACTAGGAAGGGACAATCTCTCCAGAATCCTTGTGCAAACTGAACACTCTGAA ACGAAAAAACCACGCCAGACTCCTAAACACAGCAGTCAAGTAAAAAGACAAGGACAAGGAGCACATCATC CAAGCAAGAAAATCAAGATTGGTCCAACGAAAGACATCTCTCTTGATGAAGCAGGCAAACATGGAAGCCT TAGTGAATTTGCTTTCTTTGATAAGGTGAGAAAAGCACTGAGTAGTCAGCAGGTCTATGACAACTTTCTT CGGTGTTTGGTTCTCTTCAACCAAGAAATCATTTCGAGAGCAGAATTGGTACAGCTTGTCAACCCATTCC TTGGTAAATTTCCCGAGCTGTACCGCTGGTTCAAGGAGTTCCTGGGCTACAAAGAATCAGACAAAATCGA GCCTCCTCACCAGCCCAAAGAAAGATCCCAGGGAGAATTATATACTGAAATAGATTTCTCCAATTGCAAG CGTTGTGGAGCCAGCTACAGGGCACTTCCTAAGAGCTACCAACAGCCAAAGTGCGGCGGAAGAACTGGTT TGTGTAACCAGGTCATCAATGACACTTGGGTCTCCTTCCCTTCATGGTCAGAAGATTCTACATTCGTTGC TTCCAGGAAAACCCAGTATGAAGAACACATCTATAGGTGTGAGGATGAGAGATATGAGTTGGATATAGTG ATAGAAATCAACTCACATACCATCCGAGTGCTGGAACACGTGTCCAAGAAACTCTCCAGAATGTCTCCTG AGGAATCCTCCAAGTTCAGACTAGACAACTCCTTGGGTGGCACATCAGAAGTTATTCACAGGAAAGCCAT TCAGAGGATATATGGAGACAAATCACCAGACATTATTGAAGGCTTGAAGAAAAATCCTGCTGTTGCTGTC CCCCTTGTTCTGAAAAGGTTAAAACTGAAGGAGGATGAATGGAGGGAGGCACAGAGGAATTTCAATAAGA TCTGGAGAGAACAGAATGAGAAGTACTACCTCAAGTCTCTGGACCACCAGGGACTCAACTTCAAACAAAA TGATGTCAAGGCACTCAGGTCAAAGAGTTTGTTGAACGAGATCGAGGCAATATTCTACGAGAGACAAGAA GGTTTAGGTACTGGAGAGAATGGAGCAGGGTTATGTGGACCTCATCTATCTCTCCCCTTCATGAATAGGC AGTTCATGGAGGATGCCTCCTCACTCATCATACATCATACCAAGAGACAAACAGGAATCCACAAGACTGA GAAGCAGAAGATCAAGCAGCTCTTACTCCATTTCTTGCCAGACCTTACCTTTGAGGAACGAGGAGAGCTA TCAGATGATGAGGATGAAGATGAAGATATGGATACAGATGAAGGGGACCAGTGTTCAAGAAAGGATGCTG CTGCTGCTGACACTAAAAAATCAAAATTTGTCAATGGGCCTCTTGAGAGGGTAATTTGGGAAGCACCCGA CTCGTATCGTATGTTCTTTGTGAACAACAACTGGTATCTGTTCTTGAGGCTGTATCACATCCTGTGTGAA AGACTTGAGAAGATGAAGAAGAGATGTGAGGTAATCATGGAAACAGAAGGAGGCCTGAACAGGAGAGCTG CCAAGGAATCGACGGCTTTAGCACTGGGATTGAAACAACCACAAATGGATCCAAGCGAGTACTATAACAC GTTGTTGGATCTGATCCGAAGTCTCTTAGATAACAACATTGAGAGTGGTACCTATGAAGACCAGCTGAGA GAGATGTTTGGTATCCATGCCTACATGGCTTTCACTCTTGATAAGGTTGTCAGCAATACAGTGAGACAGC TTCAGCACATAGTGACAGAAGATACGTGTATGCAGGTCACAGATCTGTTTGTGAATGAGATCAAGTCTGG TGGAACAGGGGGCAGTCTTGCTTCAATGCCAGTCAGAGCAAACGCTGAAGCATTGTACCAGCGGAAAGCA GAGCAGCTTCTATCGGAAGAAAACTGCTTCAAGATCACATATGCCAAGTCTGATCGTAAGCTGTGCATCG AGCTGTTAGACACAGAAGAAGATCCCAGTGATGATCCTATGGAGGTCGATAAGTGGGTGGACTATGTGGA GAAGTTTGTCCTTTCTGAAAGCATCTCACCAGAACTCAGGGAACAGCTCACCAAGAAACCAGTCTTTCTA CCAAGGAGCTTACGGAAGACTCGCCAGCAGTCACCCGAAGAGGACAAAGGTACCTGCCCAACGGACTTCA TCTCTCACATCCTGGCATCGGCCTCGGCGCAAGAATCCGCCACGCCCCCTTCCCAAGAGGAAACGGACAC CCATAATCAGGAAATGCTGAAACAGAATGACAATTCACAGGACACAGACTCTAGCACGGAGACCAAGTCG ACCGGTGATCCCAACGGGAAACCCATGGACAGTATCCTTGGCGGTGCCACCCTCAAGGATGGCAGGAAGA TACTGTCGAAGGTGGTGACCAAGGGTGATAAGAAGACTGAAGGCAGGGTTGTGGTGGGTGGTGTGATGAA TCCATTGGAAGGTGTTGACATGGTTAATAACATGGAATGCAAGTTCAACCTCAACTCCTACAAGATGGTT TATGTTGTGAACTCGGAGGATTACATGTACAGGAGAACCTCAATCACCAAGGCAAAACAGGCCCATCCAA AGGTCACTGCCAGGTTATCAGGTCGCTTCCATGAATGGGTTGACAAGTGGAGAGAGGCGAACGTCGGTGA TTCCGAGGCCGAGGCAGTCGAGAAGTGGTTCATGGGTGAAGGCGAGAACCTGGTGCCGTGTCAGACTGCG AGCTACGAGATCAAAAGCCCCAACGGAGTACACAGAAAATTCAAGGTAACATACCCAAAGAAATCGCCAG AAGAACCCAGCAAGGAGTCGTGACTGCCGCCGAATCCCTGCTTTGGAACTATGAACAATGATAAAAGCAG GCTGTATTGAGTTACTTTGAACATGCATCAACCGCTGAATCAGGTGTTTAGAAGGATCACCTCTCCATGA TACTTCAAGTGTATTCCCTTATGAGGTCATCTTATATATTGATATTGTGGAACAGTACATCACTCTATGT TTGGAATTCATACAAAGAGATCAACTTATTATTTATAGTAGCCCAATGAGATACTTGCAGTAGTTCATGC TTCTCTGTCGAGTGCTAGAATTTTCTTTTTTTTTTCATATTTGTGCAGAGTGCAGTTACAGATTTGAGTA TTTATCAGTATGGAAAACTGGAATGGAGACCCTAACAGCAGAGCCTCATGGAAAGGTGGCTTGTGGATTT TCCTCTCTGCAAATTTATTTATGTGTCATGTAGACTTGGAATTTTCCGGTGACTGTTGAAGCCTGACCAA AACATTGTGATAAGGTCGTAAGCCTACACGAAAGTGAATTTATGGTCTGTCATGCAAGCTCCTGACATAT AATATGCCTTGTACCTACAAGGATCCGTTTTCCTCACATAAATGCAGATTGTCTTCTTTTCAGATTGGTC GGTTTGATATCAAGAAAGAGATGTATTCTTGTGGGAAACAAAGTGACCGATGGCTTCAAGTCCTCTCTAT AGGACATGGTAATGAAGATCATTTGGTGACTTTGAAGTTTAGGCATTTGCATCGAGAGCAGATTCTCATG CCAACACCAAATGTTGGTTAACAGAATAATACCAGTCCCGTTATTGCGAGCTCAGGACGTCAATCCTAAC ACCAGCATCATTACAGGTTTGGTGTTGTGGTTAGTGCTAATTTTGCAACAACAGCCAGCTTTCAAAACCA AGCTTGGAAAAATTCAATGCCTTCCCCAAAGGCAGGAATGCCACTCTTTTAGGAGAAACCTGATGAATCA AGACAGCTCATCAGGTCCCTCCTTCTGCTGACATCATTGCATAGGTTACAAGCCACTGATTTGGGTTTTT AACCCGAGTTGCTTGTTGAAGAAACCTCTGCTCTATCCCTGAGCAGTCATCCTATCATATTATATTGCTA ATCACCATTCTATTTATATACACTTATGGCCAGATTTGTTGAATACTTTGCTGCATATTTTCTAAAAATG TGTGTACAAAAGGCAATATACATTCCAGGTCAGTATACAAATTCCCCAACATTGATATAGTGTGCTTTTT CTTTCCCTCACATCGCTTCAGTTTATTCCACCCACCCATCCCCTTTATCACTTTGCCTTTCTTCACTATC ATGTATAAATATAGCTGATACCTGTTCAATTGTATTTATTATACCTTTGCATTGTTAGATTGAATGAATT ATGCCATATTCTTCATTTTTGCATTTAAAATCTGTGTGCAGGGCCTGGGTAGACTGAATCATTTCATTTA AATGCAGATCTCAAATCTGAATATGAATTCACTGATATAGCGAGATTTTTGGTGAGGCAGACATTCTGTT GTTTGGTGTTGGGAGGTAGGATTTCAAGTCTTATTATTGGAATATAATGTACTATGTTGGAATTCAATCT GGTATTCATGCAGCTCACAAAGATCAATATGGATTTGAGCATGAAAATACATTATTTCTCTATATTTTCT TCAAATGGGCTTTGTGTTAGTTTTGCAAATAAACACATAGAATCATGAAAAATAGTGGTTTGTTTGGTAT TTGAGGTTGGTTTAGTTCACAACCAAAACTATTTAGAGATGATAATGTAAGGCTTTTTTTACTGGTAGGA TCTAGTCTTCACCTCATTCTGAATATTAAAGAGATTTACTATTCTCTTAATATCCAAGGTCGAATGTGTG TTGAAACAGAATGAAGTTTGAACTGGTACTTACACATCTGAAAGCATTTAAATTCAAGACTTTCTACACC AAATCTATGTCCCCCCCCCCCCTTCTCTTCTCCCTATTTTGCACAATGTAAGGCTGGCTGGCTGTTCTTG GAGCTATATAGGTGATTCAATCCCGATTAATTTCTCATCTTTCCAATAGAAAAAGGGATAAGTTTGACAT AGTATTGTGTCCCTGGTCATGTAGCACAAAGATTTGAGATAGATCACAAGTAGAAAAGACAGTTGCTGAT TGGTTCCCGGTAAGGGTTTTGAACAAAAGATACATGGATCAATGATCTTGATTGGCCATTGCCGTGAAGC GATATTGCAAACCTACTGTGCCAAAGCATTCTGGGCCCACTAACATAAAGCTTAGCAATTGATCATGAGG CTGATTTCTAAGATTGATTGCATTGATTATAGTGTATGATCAATCACAGAAATTGGCCTTATGATCAATC ACTAACCTTTATCTGACAGAACCCTGGCCTGGAATGTATTATGCTTGCTTCTTTCTATCATTGTGATATG GATTGTAACTTGGGTATAGGTGCTGTGTTTCTGTTTAAATTTCCCAATCATGAAATCATTGCTATTTGCA TATTATTGATCTCAGGATTAAAATGCTGAAGATCTGTTTAAATATCGCAACCTTTGACACACTTGAGCAC ACCCATTTTTCTATTGCATATTCTAATTACCACAACTTACAATTATCAGTAACATTAAACCAATTTCTGT TGTAAATAACATGGCCCATTTATCACAAAGCTTAGCATTTGATCATAGGGCCAATTTTTATGCCTGATTA CATTAACCATTGTGTGTAATTATGTGTACAAAGTAACTGTGTGATCAATCGCTAAGCTTTTTGCTTCCGG GGGCCCTATACTTGCCTTTCTTCATATGGTCAGCTCTACCATTATTGTGCAATGGGGACTGGGAGAAAGT ATATCTAGGGAAAGTGTTCAATGAATTGTGACATTAATTTATTTTTTCTCCAATTTGCATTCACTTGACC CATGCATTTAGAACCAACAGATTCTTATCTATTTCAATAACACATCAAACCCATACTGTTTCTTTAAAGG GGAAATTCATCATGATGTTCATTTTGTTGTGTGAATACCAGAAAATGATTAAAAGATAAGGGTGAAGGTT TGAGAAAAATCCATTGAAAATTGAGAAAGTTAATTTTGATTTTTGAGCCGCAGCCCCATTTTGTATGTAA TATAAGATGCATAAATTTCAATGTTGTAATGTTTTATTATGACTTTGAATATTCTCCTTCCAGGAGCAAG ATTGAAATTATTTGTCTGTTGATATACTTGGGCACAATAAAAGCCACTTTCACTTTTGCAAGAAAATGAC ATTTCATTGAATGTTAAAGTTCACAATACATGGTTGCATATAACATCACATATAAAAAATAAAATTCTAA AAACTTTTTAATCTGGTGGATGAAACTCAAAGTGTAGCCTGATATTTGTTATTATTTTTCTGCTTTGTTT ACAAGAAAGTTTTGTCAGAGTGAACTTCCCCTTTAAGACAGTAAAGGTAATTGTGTTGGTCCCGTCCCAC CTGTCATTAACAGTCTTCTTGAGAACCAAGCATGGTGTGTACATGTATGAGATGTTTATTATCTATGGGT AAAACCGTGTAAAAATGTAAATTAAACAAATCATGTCTATATTTACACTTTGAAACTTGGGTGTTGTGTA GAGACATGTGTGTATATGTATATATATGTAAATATATTTTT
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???blast.eval.minus100???
???blast.numalign???
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???blast.numalign.1???
???blast.numalign.5???
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???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
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???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
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BLAST time is limited to 30 seconds