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Echinobase
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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???blast.header???
Download BLAST databases
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???blast.program.blastp???
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041604449.1 PREDICTED: Lytechinus variegatus paired amphipathic helix protein Sin3a-like (LOC121411637), transcript variant X2, mRNA ATATGCAAATAAGCATAACAGTGTATCTTTCCCGAAAGGATGTGGATTTACCCGTAGATTTGGACGTAAA ATCCGAGGAAATCTGGACCATCTGGTTATTTTAACTGATTCTTATCAGAGAGGACTCCTAATAATCTTCC TCTGGTTGTCCCTTCAACATAATGAAACGCTCTGGTGCGGAACCTCAGGAGAGTGCATTCCCGCAGCAGC GAGTCAATACAACGGTGCCTGTTGAGAGGGTGATTGGCAGCCAACGTATCCCATTGCCTTCATCTGTCCC GGTCTTCGAGCAGGCAGTACAACCCGAGAACATGGCTAGTGGTTTACATTATCAACCTATGCCTGGATAT TCTGTGCCACCAGTAGGACAGCCTGTCAGCCACCATGGTGGGGTACACCATCCACCAAACCATCCCCATC CACACGCTGCATCCCAACAGGCTGCAACTCACCAACAAACCATCCATCAGGCTCAAGCACAGTCTCAGGC ACAAGTTGCTCAGGTACAAGGCCAACAGCAGCAGCAACAACAACAGCAGCAGCAGCAACAACAGCAGCAG CAACAACAATATCAGAGGCTGAAAGTTGAGGATGCTTTGTCATATCTCGACCAGGTCAAGCTTCAGTTTG GAAGCCAACCTCAAGTCTATAATGACTTCCTTGACATCATGAAAGAATTCAAATCACAAAGCATTGATAC CCCTGGTGTTATCAATCGAGTTTCCAACCTCTTCAAAGGACATCCAGATCTCATTGTTGGTTTCAACACG TTCTTGCCTCCTGGATACAAGATAGAGGTTCAAGCGAATGACCCGTCACAGATTAATGTCAGCACACCTG GAAACCCAATACCAAAGCTTCTGACTGTGACGGGCTTACACCCCAACAATACACCATCCTCTGGGCCAGC CAGCAGTCATGGGTCGGTGGTTCAAACCCAGACTCAAGGACCACCTACACAGAGCTCCCAACCGCAAGTG GTAACACAACCAGCTAAGCAAGCTTCAGGAACATATGGACAGGCCAGTATTTCAAAGGCGAATCTCCATC AGATGGCGAGTGCCGTTCCCATTCAGAACCAAGCTGCAGCTGGAGGACATACCTACTCCCAACCCCCTCC CCCTGCTGCCCAGACGAGCCCACAACAGTCACAGATTGGACATGTTGCTACTGGAGGTGGTGGGGGAGGA GGAGGGGGCGGTGGAGGTGGTGGAGGAGGAGGTGGTGGGAGTGGTGGTGCGGGTCAGCCAGTAGAGTTTA ATCATGCTATAACGTATGTCAACAAAATTAAGAACCGGTTTCAAAACCAGCCTGAAATCTACAAAGCTTT CCTGGGCATCTTGCATACCTACCAGAAGGAGCAACGGATCGTCAAGGAATCTGGTGGCACCTACCAACCT TCCCTATCAGAAACGCAAGTCTTCAGTCAGGTGTCCAAACTGTTTGAAAACCAAGAGGATCTCCTCAAGG AGTTTGGGCATTTCTTGCCCGATGCGAATGGTGCTGCTGGATTAGCGTCCTCCTTTGGACTAGGAAGGGA CAATCTCTCCAGAATCCTTGTGCAAACTGAACACTCTGAAACGAAAAAACCACGCCAGACTCCTAAACAC AGCAGTCAAGTAAAAAGACAAGGACAAGGAGCACATCATCCAAGCAAGAAAATCAAGATTGGTCCAACGA AAGACATCTCTCTTGATGAAGCAGGCAAACATGGAAGCCTTAGTGAATTTGCTTTCTTTGATAAGGTGAG AAAAGCACTGAGTAGTCAGCAGGTCTATGACAACTTTCTTCGGTGTTTGGTTCTCTTCAACCAAGAAATC ATTTCGAGAGCAGAATTGGTACAGCTTGTCAACCCATTCCTTGGTAAATTTCCCGAGCTGTACCGCTGGT TCAAGGAGTTCCTGGGCTACAAAGAATCAGACAAAATCGAGCCTCCTCACCAGCCCAAAGAAAGATCCCA GGGAGAATTATATACTGAAATAGATTTCTCCAATTGCAAGCGTTGTGGAGCCAGCTACAGGGCACTTCCT AAGAGCTACCAACAGCCAAAGTGCGGCGGAAGAACTGGTTTGTGTAACCAGGTCATCAATGACACTTGGG TCTCCTTCCCTTCATGGTCAGAAGATTCTACATTCGTTGCTTCCAGGAAAACCCAGTATGAAGAACACAT CTATAGGTGTGAGGATGAGAGATATGAGTTGGATATAGTGATAGAAATCAACTCACATACCATCCGAGTG CTGGAACACGTGTCCAAGAAACTCTCCAGAATGTCTCCTGAGGAATCCTCCAAGTTCAGACTAGACAACT CCTTGGGTGGCACATCAGAAGTTATTCACAGGAAAGCCATTCAGAGGATATATGGAGACAAATCACCAGA CATTATTGAAGGCTTGAAGAAAAATCCTGCTGTTGCTGTCCCCCTTGTTCTGAAAAGGTTAAAACTGAAG GAGGATGAATGGAGGGAGGCACAGAGGAATTTCAATAAGATCTGGAGAGAACAGAATGAGAAGTACTACC TCAAGTCTCTGGACCACCAGGGACTCAACTTCAAACAAAATGATGTCAAGGCACTCAGGTCAAAGAGTTT GTTGAACGAGATCGAGGCAATATTCTACGAGAGACAAGAAGGTTTAGGTACTGGAGAGAATGGAGCAGGG TTATGTGGACCTCATCTATCTCTCCCCTTCATGAATAGGCAGTTCATGGAGGATGCCTCCTCACTCATCA TACATCATACCAAGAGACAAACAGGAATCCACAAGACTGAGAAGCAGAAGATCAAGCAGCTCTTACTCCA TTTCTTGCCAGACCTTACCTTTGAGGAACGAGGAGAGCTATCAGATGATGAGGATGAAGATGAAGATATG GATACAGATGAAGGGGACCAGTGTTCAAGAAAGGATGCTGCTGCTGCTGACACTAAAAAATCAAAATTTG TCAATGGGCCTCTTGAGAGGGTAATTTGGGAAGCACCCGACTCGTATCGTATGTTCTTTGTGAACAACAA CTGGTATCTGTTCTTGAGGCTGTATCACATCCTGTGTGAAAGACTTGAGAAGATGAAGAAGAGATGTGAG GTAATCATGGAAACAGAAGGAGGCCTGAACAGGAGAGCTGCCAAGGAATCGACGGCTTTAGCACTGGGAT TGAAACAACCACAAATGGATCCAAGCGAGTACTATAACACGTTGTTGGATCTGATCCGAAGTCTCTTAGA TAACAACATTGAGAGTGGTACCTATGAAGACCAGCTGAGAGAGATGTTTGGTATCCATGCCTACATGGCT TTCACTCTTGATAAGGTTGTCAGCAATACAGTGAGACAGCTTCAGCACATAGTGACAGAAGATACGTGTA TGCAGGTCACAGATCTGTTTGTGAATGAGATCAAGTCTGGTGGAACAGGGGGCAGTCTTGCTTCAATGCC AGTCAGAGCAAACGCTGAAGCATTGTACCAGCGGAAAGCAGAGCAGCTTCTATCGGAAGAAAACTGCTTC AAGATCACATATGCCAAGTCTGATCGTAAGCTGTGCATCGAGCTGTTAGACACAGAAGAAGATCCCAGTG ATGATCCTATGGAGGTCGATAAGTGGGTGGACTATGTGGAGAAGTTTGTCCTTTCTGAAAGCATCTCACC AGAACTCAGGGAACAGCTCACCAAGAAACCAGTCTTTCTACCAAGGAGCTTACGGAAGACTCGCCAGCAG TCACCCGAAGAGGACAAAGGTACCTGCCCAACGGACTTCATCTCTCACATCCTGGCATCGGCCTCGGCGC AAGAATCCGCCACGCCCCCTTCCCAAGAGGAAACGGACACCCATAATCAGGAAATGCTGAAACAGAATGA CAATTCACAGGACACAGACTCTAGCACGGAGACCAAGTCGACCGGTGATCCCAACGGGAAACCCATGGAC AGTATCCTTGGCGGTGCCACCCTCAAGGATGGCAGGAAGATACTGTCGAAGGTGGTGACCAAGGGTGATA AGAAGACTGAAGGCAGGGTTGTGGTGGGTGGTGTGATGAATCCATTGGAAGGTGTTGACATGGTTAATAA CATGGAATGCAAGTTCAACCTCAACTCCTACAAGATGGTTTATGTTGTGAACTCGGAGGATTACATGTAC AGGAGAACCTCAATCACCAAGGCAAAACAGGCCCATCCAAAGGTCACTGCCAGGTTATCAGGTCGCTTCC ATGAATGGGTTGACAAGTGGAGAGAGGCGAACGTCGGTGATTCCGAGGCCGAGGCAGTCGAGAAGTGGTT CATGGGTGAAGGCGAGAACCTGGTGCCGTGTCAGACTGCGAGCTACGAGATCAAAAGCCCCAACGGAGTA CACAGAAAATTCAAGGTAACATACCCAAAGAAATCGCCAGAAGAACCCAGCAAGGAGTCGTGACTGCCGC CGAATCCCTGCTTTGGAACTATGAACAATGATAAAAGCAGGCTGTATTGAGTTACTTTGAACATGCATCA ACCGCTGAATCAGGTGTTTAGAAGGATCACCTCTCCATGATACTTCAAGTGTATTCCCTTATGAGGTCAT CTTATATATTGATATTGTGGAACAGTACATCACTCTATGTTTGGAATTCATACAAAGAGATCAACTTATT ATTTATAGTAGCCCAATGAGATACTTGCAGTAGTTCATGCTTCTCTGTCGAGTGCTAGAATTTTCTTTTT TTTTTCATATTTGTGCAGAGTGCAGTTACAGATTTGAGTATTTATCAGTATGGAAAACTGGAATGGAGAC CCTAACAGCAGAGCCTCATGGAAAGGTGGCTTGTGGATTTTCCTCTCTGCAAATTTATTTATGTGTCATG TAGACTTGGAATTTTCCGGTGACTGTTGAAGCCTGACCAAAACATTGTGATAAGGTCGTAAGCCTACACG AAAGTGAATTTATGGTCTGTCATGCAAGCTCCTGACATATAATATGCCTTGTACCTACAAGGATCCGTTT TCCTCACATAAATGCAGATTGTCTTCTTTTCAGATTGGTCGGTTTGATATCAAGAAAGAGATGTATTCTT GTGGGAAACAAAGTGACCGATGGCTTCAAGTCCTCTCTATAGGACATGGTAATGAAGATCATTTGGTGAC TTTGAAGTTTAGGCATTTGCATCGAGAGCAGATTCTCATGCCAACACCAAATGTTGGTTAACAGAATAAT ACCAGTCCCGTTATTGCGAGCTCAGGACGTCAATCCTAACACCAGCATCATTACAGGTTTGGTGTTGTGG TTAGTGCTAATTTTGCAACAACAGCCAGCTTTCAAAACCAAGCTTGGAAAAATTCAATGCCTTCCCCAAA GGCAGGAATGCCACTCTTTTAGGAGAAACCTGATGAATCAAGACAGCTCATCAGGTCCCTCCTTCTGCTG ACATCATTGCATAGGTTACAAGCCACTGATTTGGGTTTTTAACCCGAGTTGCTTGTTGAAGAAACCTCTG CTCTATCCCTGAGCAGTCATCCTATCATATTATATTGCTAATCACCATTCTATTTATATACACTTATGGC CAGATTTGTTGAATACTTTGCTGCATATTTTCTAAAAATGTGTGTACAAAAGGCAATATACATTCCAGGT CAGTATACAAATTCCCCAACATTGATATAGTGTGCTTTTTCTTTCCCTCACATCGCTTCAGTTTATTCCA CCCACCCATCCCCTTTATCACTTTGCCTTTCTTCACTATCATGTATAAATATAGCTGATACCTGTTCAAT TGTATTTATTATACCTTTGCATTGTTAGATTGAATGAATTATGCCATATTCTTCATTTTTGCATTTAAAA TCTGTGTGCAGGGCCTGGGTAGACTGAATCATTTCATTTAAATGCAGATCTCAAATCTGAATATGAATTC ACTGATATAGCGAGATTTTTGGTGAGGCAGACATTCTGTTGTTTGGTGTTGGGAGGTAGGATTTCAAGTC TTATTATTGGAATATAATGTACTATGTTGGAATTCAATCTGGTATTCATGCAGCTCACAAAGATCAATAT GGATTTGAGCATGAAAATACATTATTTCTCTATATTTTCTTCAAATGGGCTTTGTGTTAGTTTTGCAAAT AAACACATAGAATCATGAAAAATAGTGGTTTGTTTGGTATTTGAGGTTGGTTTAGTTCACAACCAAAACT ATTTAGAGATGATAATGTAAGGCTTTTTTTACTGGTAGGATCTAGTCTTCACCTCATTCTGAATATTAAA GAGATTTACTATTCTCTTAATATCCAAGGTCGAATGTGTGTTGAAACAGAATGAAGTTTGAACTGGTACT TACACATCTGAAAGCATTTAAATTCAAGACTTTCTACACCAAATCTATGTCCCCCCCCCCCCTTCTCTTC TCCCTATTTTGCACAATGTAAGGCTGGCTGGCTGTTCTTGGAGCTATATAGGTGATTCAATCCCGATTAA TTTCTCATCTTTCCAATAGAAAAAGGGATAAGTTTGACATAGTATTGTGTCCCTGGTCATGTAGCACAAA GATTTGAGATAGATCACAAGTAGAAAAGACAGTTGCTGATTGGTTCCCGGTAAGGGTTTTGAACAAAAGA TACATGGATCAATGATCTTGATTGGCCATTGCCGTGAAGCGATATTGCAAACCTACTGTGCCAAAGCATT CTGGGCCCACTAACATAAAGCTTAGCAATTGATCATGAGGCTGATTTCTAAGATTGATTGCATTGATTAT AGTGTATGATCAATCACAGAAATTGGCCTTATGATCAATCACTAACCTTTATCTGACAGAACCCTGGCCT GGAATGTATTATGCTTGCTTCTTTCTATCATTGTGATATGGATTGTAACTTGGGTATAGGTGCTGTGTTT CTGTTTAAATTTCCCAATCATGAAATCATTGCTATTTGCATATTATTGATCTCAGGATTAAAATGCTGAA GATCTGTTTAAATATCGCAACCTTTGACACACTTGAGCACACCCATTTTTCTATTGCATATTCTAATTAC CACAACTTACAATTATCAGTAACATTAAACCAATTTCTGTTGTAAATAACATGGCCCATTTATCACAAAG CTTAGCATTTGATCATAGGGCCAATTTTTATGCCTGATTACATTAACCATTGTGTGTAATTATGTGTACA AAGTAACTGTGTGATCAATCGCTAAGCTTTTTGCTTCCGGGGGCCCTATACTTGCCTTTCTTCATATGGT CAGCTCTACCATTATTGTGCAATGGGGACTGGGAGAAAGTATATCTAGGGAAAGTGTTCAATGAATTGTG ACATTAATTTATTTTTTCTCCAATTTGCATTCACTTGACCCATGCATTTAGAACCAACAGATTCTTATCT ATTTCAATAACACATCAAACCCATACTGTTTCTTTAAAGGGGAAATTCATCATGATGTTCATTTTGTTGT GTGAATACCAGAAAATGATTAAAAGATAAGGGTGAAGGTTTGAGAAAAATCCATTGAAAATTGAGAAAGT TAATTTTGATTTTTGAGCCGCAGCCCCATTTTGTATGTAATATAAGATGCATAAATTTCAATGTTGTAAT GTTTTATTATGACTTTGAATATTCTCCTTCCAGGAGCAAGATTGAAATTATTTGTCTGTTGATATACTTG GGCACAATAAAAGCCACTTTCACTTTTGCAAGAAAATGACATTTCATTGAATGTTAAAGTTCACAATACA TGGTTGCATATAACATCACATATAAAAAATAAAATTCTAAAAACTTTTTAATCTGGTGGATGAAACTCAA AGTGTAGCCTGATATTTGTTATTATTTTTCTGCTTTGTTTACAAGAAAGTTTTGTCAGAGTGAACTTCCC CTTTAAGACAGTAAAGGTAATTGTGTTGGTCCCGTCCCACCTGTCATTAACAGTCTTCTTGAGAACCAAG CATGGTGTGTACATGTATGAGATGTTTATTATCTATGGGTAAAACCGTGTAAAAATGTAAATTAAACAAA TCATGTCTATATTTACACTTTGAAACTTGGGTGTTGTGTAGAGACATGTGTGTATATGTATATATATGTA AATATATTTTT
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
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???blast.wordsize.5???
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???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds