Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041600246.1 PREDICTED: Lytechinus variegatus tyrosine-protein kinase Tec-like (LOC121408688), transcript variant X2, mRNA CATGACACGCAACTAGCATCCCATACACAACTACACTGAAACGACGTCAACTCAATCCAAACGCGGAAAT GGGTGACACTTTTTGTGATTTTTCTTCAAATATATCATAAATTTAGATTTACTGAAGGATTACAGTCTCA TGAGCAGAATCGGACTATTTTTTGTCACAGCTTGCATTAATCTGGATAAGTGATAAGAACATACATGTAC TACAGTCACTGAAGGGTTAAACTGAGGATTGGTCATCATTGATGCAAGTTTACTGTGGAAAATACATACA TGTATACATTGGACCAGATAGAAATGAAATGTAAGTTTCATCATTGGTGCCAGACATACAGCATGATGTA GGTACACACAAGTTATGAATGACTGACAACTGAAAATAAAACTGAAAAGGAAGGTTGGAGATTTTGATGA AACTCTGAATTTGAACTTGAAGGATTTTACGCGAGAAGTCCGTCATCATGTCAACAGGATCAGGGTATGA TGGCGAGATTCGCACTGGGTTCATGCACAAACGATCGCAGAATAAACGAGCGACAACCAAGACAAACTTC AAGACAAGATGGTTTGCCCTCACTCCAGGTCTGCTGATATATTACGATGGTAGCAATGAGAAACGTGGAA AAGAGAAGAATCGTATTGATCTGAATCAGATTAAAGTGGTTGAACCTGTTTCTGATGGTGCTTTCCAAGA CAGACAGAATGGCATTCAGGTTACGTACAGTGAGCAGAATAACGATGTTACTCTCTATTTCTTCCCAGCG TCTAAGAAAGAGCAACAAGAATGGCTTCATGATCTCAGAGATTTGGTTAAGAACAATCCCAATCTTAGTG ACCGATATCACTATGGTATCTGGACGATGTCAAAATACACCTGTTGCCAGAAGGATTATAAGGGAGCTCC AGGATGTCAGAACACTTACAGAACACAACCTCAACCGTCTTATCCAACTACACCATCAAACGGTAAACGC ACTCATGGGCCTCAACAAATCAGCTTACCTGGAGTGCCTATAAACAACCAGAAACGACCTCCTAAACCAC CGATACCCATCCCAAATCCACCTGTTACAGATAGACCAAAGATGATAGTAATAGCCAAGTATGACTACGA ACCATTAGAGAAGATTGATATACCATTACAGAGAGGCCAGGAATACTCAGTACTCAATAACTCCAGAGAA TACTGGTGGAAAGTCAGAGATAAACACGGGCGCGAAGGTTTCATACCCAGCAACTATGTAGAAGAAAAGA GTAAATATTCAACAGGCCTAGAAAGATATGATTGGTTTAATGGAACGTGGTCAAGACAAAGAACAGAACT TGAACTAAAACAAGAAGGCAAAGAAGGCTGTTTCACTGTAAGGAATTCAAGACAACCAGGATTGTGTACG CTCTCAGTATTAGCCAAAGAAAAAGGACCAGGAGGAGAGGACGTAGTTAGACACTACCACATCAAACAGA ACTCACACAAAGAGTTTTATGTATCTGAGAAACATTGTTTTAGAGATATGGCTAAACTCATTGAATACCA TCAACACAATGCTGGGGGTCTAATAACGAGATTACGGAATCCACCAGGGTTTACGTTACCAACCACAGCT GGTCTTGGATCAACTAAATGGGAGATCAGTTGGTCAGAGCTGAAGATATTACAAGAGTTAGGGAGAGGTC AATTTGGTGTGGTCCATTTGGCGAAACTGACCCACAACAACCGGTTTGTAGCGGTCAAGAGAATGCAAGA GGGATCTATGTCAGAAGAGGACTTCATCGATGAAGCTAAAGTAATGAAAGAATTACAACATGAAAACCTT GTACAGCTCTATGGTGTAACATCAGCACAAAGACCAATGTGTATAGTCACAGAATATATGTCAAAAGGTT GCTTGTTGTCATACCTCAGAACACACACGTATATGTTATTAGAGAACACCTCAATACTCATCTACATGAC CCAGCAAGTCTGTGCTGGTATGGCCTATCTAGAATCAAAGCACTTCATACACAGAGATTTGGCTGCGAGG AATTGTCTTGTAGGTGATAAGCACATTGTCAAAGTGGCAGACTTTGGTCTTACTAGGTATGTGATGGATG ATGAATACACAAGCTCAGGGACTAAGTTTCCAATCAAGTGGGCTCCACCTGAAGTACTCCATTATACAAG ATTTAGCAGCAAGTCAGATGTATGGGCATTTGGGATCCTGATGTGGGAGGTGTTCTCCGGTGGCCTGGCT CCGTACCCTGCCATGAGTAACGTAGAGGTCGTTGATCAGGTCACGAGGCACGGCTATCGTATGGATCGAC CTGATCATTGTCCGTATCAGATGTACAGAATTATGAATGAGTGTTGGAGAGAGAGACCAGAGAATAGACC ATCATTCAACTCCTTGACTGGCAAATTAGATCAATTAACAGAAAGAACAGAGGTTCATCATTCATGACAC CAATAACTCAAACAACAAATGGTGTGCTAAGGTGTGCATCTCCAATAGCCACAGTTTATCTATAAAGAAG AGAGAGTGTCCTAGTCTTTGGTGTCCAGACACTTTACAGGGTTCATCATTTGGTTGAGGTGATATTGCTT CCAGTGTATCATCAAATCACTAGGAACATTATATGTACTAGTCGTGGTGTCCAGCCACCTTGGATCAAGA CATCAATGCACTGCAATTCTATTTGAGAATGTAGACATGTTAAACATTTTTCAGAAATGCCTTGAATGAA CCTGATGACGAAGAGAGTAAAGAAGAACACCCATGTCGTTTTCTTAATCCGAGGATAATCAATGGGCCAT AAGAAACTAAGTGATGACCTTGCATTTAGATTTCAACTGAGTTTGTTTCATTCTATGACCAGGATAGAAG GGACACCTCATTCAAACTGAATGTCAGCATTAAGTGTGTCCAGAGATTGCAGCTGACACCAATCTTAGTC TTGTAGGACAGACTCTAGCCTTGATGTGACCTTGACCAACCCTTAAGATGAAATGTGCATAATTATCGAT GACTCTTGGATAGGATCGTATTGAGTGTGAGGTTTCGTAGGGTGACTCCAGAAACAATGTGATTGTTAAA AGTTCCAGCCTACATACCTCAATCTTTCTTCCATCAATGTGTAGCTTTGGTTTCATTCATTTGATAAGCC TTTCGCCAGAGTCGTAGAAAGTGAAGTTGTGATGAATGGAACCGGCCTATTCACAGCAATAGCCCTTGGG GCACCTACTACCAAGCCCAAATTTCTCAACAGATCATATCATTATATGATGACAATGTTACCAGCAATGT TGGTTTTCATGCAGGTAGCCAATTAGTGACCCCTCCACATATGACTAGGTCGATCCACCCACATATGGCA TCAATACTAACAAATGGTACAGGGTCACTCGTTCATTCAGAATAAAATGCTTGTAATAATAAGAGCTAAG GTATTTTGATATTTTTTTGATGGACTTATTTGTAATGTTGATACTAGCCAAAAATTCCATCTCAGATACT AGTTTACAATTAGGCTGCATTCTTTTTATACTGATATTGACGAGGTATTTCGTTATTTTACATGTTTGCT CAATAATGTTTATTTTTCTATCGCGACACAACTTTCATCACAATAACGAACTACATGCTACTTGTCAAAA CTTTTTGTACATCATTCACATTTTATTTACACTTATGATACTCGTATTGCGTGTGTCATGCTATGTCACT GTTGTAAGAAATCTGATTAAAAATTTAAATACATTCCTCCTAAATGACAAATTCGTGTAAAATCAACTCT AAAAAGATTAGAAAGATAAGAGAAAGCAGTAAAAAGTTGTATTTGTGGAATAGTGGCCTCCGTGCACTGT GCACTGGTGAATGTCTTTGTGTAGTCCTGTATTGTACTTCCATATTCCCACATATACTACCAGGCTAGAT TTGACTGGTTTATCCTAAAGAGGGCCACCCCCACTGATAATCATGTACTAACTCATACTGTAAACACTTG CCGAGGAAGCTAGACAGATGTGGTGCTTGTAAAACATTCCTGGCTGAATAGATAGCACACAACTAGCAGT AATAAGATATGAGATCAATATGTATATTCTCTTTATTCTCCAGTCAGCTTTCTGTAATAAGTTGGATTCC TGCAAGTTACCATTGCATAGCAAAGTTATAACTTTTATGTAACAGGGCCCTGACCCGCTGTGTGGGATCT CCCTGAAATGATTCATCTCTATTTTCTAGTACATATGAAAAGTTGTTTTGTTCTCAGATTATCACGGCAT CGATAGCAGATCATGAAATGAAGTAAGAATGGAATTGATTGGGGTGCGATGTAAGAAAGGATGGATTGTT TGGGAGGAATGTCATTTTTCTCATATTTTTATCATATTGATAATATCCAGACTCTGTTTCTTATATTGAA ATTGTGCATCTTCTAGAATTACTTGAAAATAAGTTGGCTATCAGGGATAAGAGTGTGCAAGGATTACCAA GAATGGTGTTCAAGTCACTTCAATGATGTAATGATGAAAACTTGATTCTTTTTTGTTGTCTTTGGCAAAT TATACCACACCACATTCTAAAACAACACCTTTGGATCAAATAAGTGAAGAAAACTAGACAAGTATTGAAG TGCTTTGTAACTGCAAGGAAAAGGGTCTCTACCAAAATTCTTGCTATGGAATTGGTTGGATTGGTTTTGT TCCCAATTTTCAAACTCAAGCAGAATAGTAATGAAGATCAAGCGTTTATTCAAATTCCATGTTTTTTTCC CATCACTTTTTTTCAAAATTTACTGTCATACAAGTAAAGTTGTTTAATGGTCTAACATGCACATTCTTCC AACGATATTTGTTGGTTTTATTAGTAAAAAGTAGTGTTCTGCATATGAATTTTCTCTCTCTAATCAGCGA ACCAACTTTCCTTCCTATCTTTATATTTTGACAGTCTGTAGTATGAAATACTTTGAAGGACTGCTTGTAT GTACTTTCAACTCAGTAGATCTTTTTGCATACCTTTGTAACTATGCAAATATATATGTTCATTTCACAAT AAGGATGGAGATTTTTTTATAGTTACTTCCACGTTTTGATGTCTTTGTCTTTTCAATTTTGGGGCATCTT TTTATAGCTTTTATATATTTTGAATTTGGAACTCATTTGGTTTCTACAGAAGCAATATATTATATTTTTA TAGTGTGTCATACAGCTGCAGTTGAATATCTTCATATTATGTTGCATAATCAGGTCTATGATTAATTTGT GAGCCTTTTTTATATACATCTTAAGATTGAATTGTTAAAAAAAAAAACTGTTTCATTCATCTTGTGCCAA CATGCAAATCCAAGAAAATTGTGTGAACTGAAAATTCTTTATTTTTTATACAAACAAATACATATGTCAT GAAAATTGCACAGGTCGTAGGCAGCAATGTTTTTGCTTGTGTCAGAAGATGAACTTAATGGCCCTATACA TGCTATCAATGTTTGTGGTGTAAAATAAAGCCTCGGACAAAGTGCTGCAAGTGAGCACTGCAAGTGTCAA ATGCCCTTAAAATAAGTGAAATTACAAGTGGTGTATTCAGTCACTGGTATGTTTGTGAACTGTTGTGTTC TCATTGTTATTTATTAATCTCAAAATTATTCATGCATTAGTTCTGACATTAAATTTTTTATCACAATGAT GCGAGAGCTATTAAAATCAAATTCATCATCATTCCAAGACATTTTTTTCATACTCTTTCTATTTTCATTA GTCCCTTTCAGAAATTGAATTTCACTTTATCAGACTTCATGGTGGTTTCAAAAAACAAATATTTTTGGGG TACAAATTAAAAGTATGAAGGATGTACCATGAGTCATTCATCATTAAGACTTTTATTCAAATTGCTCTCT AGTTGTTTGATGTTATTTTTTATTCAGTGTGAGCAGGTTACTAACAAATTTAAATAATGATGATTACTGA TAGATGCTATAATGCATTCACACATATATAGCATGATCTACCCTATGGCTTATTACAATACATTGTATTA CTCCTGATTTAATGTTAGCTATGATTTCCAGCATGTAGTGCATTCAAAGAATTCATCTTTCTGACTATCC TCTCACCTCTACTGGATTGAACGCAGCACAATGTGGATTAAATACAGGTTCATATCAATTCCACTTTTGA CAGTCTTGTTCTTTGGAAAGGTACTTTAAATTAGACTGATCCTTGTTTTGATTGTAAGAGGTAAGATTGC AAACACTTTCTAAGGAGCAACTCTAGCAATACCTTGTGATTTCATTCTTGTTATTGACATTTGTTATATT TTCATGTATTTATTACTGATTGGTCTGATTATTGGTGTTGCACTTGTCGTATAAGTATCATGTAAGCATT TCAAATCATGTCATTTTAATCCTGCCATTAATTATGTAGAAGTTGTAATACTCAGAAAGATGTAAATTAC TTATCAGAGTAATAAATATTGCTTTTTAAATGTCTGTAACGATAAGATGGGTGAATTTTGAATACTAGTA TTGCATGTCATATATGATTACCCCTGTTGTTTGGTGTATCATGATATGTGATTTGTATAGCTTGTGATGT AAATTGATTAATTTGTATATGATGTCAATCCTCTATGTACTCCTTGTATAGTCTTATATAACGGCTACAT ACAATCACTTTATATCTGTAAATATGATCTCATATAAATTTATCTATATATAATATGCATCAGCATTTTT GTAAGTTTTAGCGGTGCATGTATGATAAAGGGCCTATATGCTCAGATGAGATTGAAATCATTGGTGAATT AAATATCTCATGATGGGTGAGAGGTGAA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds