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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041597958.1 PREDICTED: Lytechinus variegatus serine/threonine-protein phosphatase 4 regulatory subunit 1-like (LOC121407046), transcript variant X5, mRNA CCAGTCGGGGACGGCTGTGGGAACCACATGTTATTCGATGAGTGCGCCAAGTCTCCACATGGCCAGCTCG TTTCCTGTCAGCCAGCGAGGAAGCCCCCATGCATCCACCACCATCCCATGCTTTCAGGGGCGTGTTTGTG GAAGGGGAGGACGGCGAAATTGGGATGGTCAGCTCTGCGATTGATAGTCCAACACCAGAGGAGTCCCTTA CCCCTTTGGCCAGACTCAAGAAAGACATCAACAGTGACAATGTCTTCAATAGACAAATGGTTGCTCGTGG TCTACTGGACACCCTAAGAACGGTCTGCGACAATGAGGAAGATCGGGAAGCCGGGCTAGAAGCCATGAGT CACCTATCGGAAGATATCGAGCCGATGGTGCGAGCCGAACTGATGGAGCAGATACCGCACATCGCGATGC TGTGCCACGAACACCAGCTCCTCTTCCCATCCACCATCCAAGACTACATCTTACCTACGGTGGTGCGCTA TCTCACAGATACAAACAACCAGGTCCGGAAGACCAGTCAAGCAGCATTGCTAGTCTTACTAGAACAGGAG TTGGTTGGGAGACAGGACATGGAGGAGCAGGTGTGTCCAGTCATTGTCCAGTTGTCCAGTCAGGATAGTT CAGATGACTACAGAACAGAGGCTGTGGCACTGATGAGCAAAGTTGCGCCTCTCGTTGGCAAGGAAATTAC GGAGAACTACTTCTTACCCCAGTTTACAGAATTGTGCAAAGACAGTTTATTTCATATACGAAAGGTCTGT GCTGCAAACTTTGGTGATATTTGTAGTGTTGTAGGAGAGGAAGCAACAGAGAAACTCTTGTTACCAAGGT TTGAAGCACTTTGTGAGGACGGTGTTTGGGGAGTTAGGAAAGCCTGTGCAGAGTGTTTTATGACGGTATC CTGGGCCACATCCAAGCCTAAACGAGAGCAGGAACTCTCTAATCTCTTTGTCCATCTACTGCGGGATCAG TCTAGATGGGTACGAATGGCAGCATTTCAAGCATTAGGTCCTTTTATCTCGACATTTGCTGACCCAAGTA TATCAGGCATTCATCTCTTATACAATGCAGATGGTACAGTCCAAGTAGCTGGCGTAGTGCCTATAGACGA TGATTTTAATAGTAACAAACAGACAAATAACTCAACTAATAATTCAGATAATAGACTAGCAGAGCACACA GTTATAGATGAACGCAGTAACAATAAATCACTTTCTAGCAAAGACGGGGCAAGTAGCGAACAAAGTACCA GTCAAGACAAAAAGACACTTCATCAAGGGGTTGGGGAATTAAACTTCAAAGTAGGGGATGGGGAACCACC TGCTCATCATGATGACAGTCCAGAGTATAGTTCTTTCATGTTTTGGCGACAGCCAGTGCCTGTTCTTGGA ACGGGAAATAAGGAATCGTCTAGTACTGATAAGGAGGGTGACAAGGAAGATGGCAAGGAAACTGAGGAAA GCAAAGGGGAAACGATCGAGATGGAATCAGTAGAAACAACGTCGCAGGACACTAACGACAGTGCAGGTGA ATCAAGGACTAAAGATGATAGGTTTACAAGTACTACACAGTTTGTGATAGGAGGCAGCAGCAATACGGGT GCAGAGAAATCATCGCCCGACTCTGGCATCAGCAGCCCAGAGGCTGTGCATGAGGACAGTGATGGCACAG CCTCGGGCGAAGGTGCTGAGGCTAAAGAGCTGAAGAAAGACATCCAGAACTTGGTGCAGACAATATCCCA GATGAATCTAGAAGGCGACGGAGAGGACGCTTCGTCACAGGATAAGGACCATCAGACGGAGACTGACGGT AGTGTCAAGCTTCACACTGCTGATGTCAGTGAAGCCAATGACATCACAGAGATGGTAATGCATCTACCAA GTACTCAGACCCTGGAGCAACGGATTGATGACAAGACTCTTTCATTTGTTAATGGTGTTTTGGAAGAGGA AGAAGAAGTCAATGAATGGTCAGAAGTCGAGCCTTCCTTCAATCAAGTCTCGCCTATACAAGATGTGATT CCACACCTTCTTCTGGAGAACTATCTGTCCATGACGGACCCACGGATAGCTCAGGCTGTGGATACAGAGA TCGCCAAGCATTGTGCCTACAGTCTACCTGGTGTGGCCCTCACCCTTGGTCGTAAGAACTGGTCTTGTCT CAAAGATATCTATGAAACATTAGCCTCTGACATGCAGTGGAAGGTGAGAAGAACATTAGCTTTCTCTATC CATGAGATGGCCTTGATCTTGGGAGATGCCATCACATCATCAGACCTTGTGCCTATCTTCAATGGCTTTC TAAGAGACTTGGATGAGGTTAGGATAGGAGTCCTCAAGCACTTTGCCGATTTTGTCAAGTTACTACAACC AGAGCTAAGGAGACAGTACTTGAGTCGGATGACAGACTTCCTGACGACAGACAACCAAAGGAACTGGCGC TTCAGGCTTGAGCTAGCAGAGCAACTGATCTTGCTGTGTGATCTGTATGATCCTAGTGATGTGTGTGATA ACATCTTACCCATAGCTACCAAGCTTGCTGGTGATAGGGTGGCTGATGTCAGGTTTACGTCATATAAACT GTTGAGCGTGATTGCAAAGATTATCATGTCCTCCAACAATGGTGACTTGAGAAAGACCTTCGTCCAAGAG ATAGTCACCAATTATGCTCAGAGCCCAAGATGGGCACACAGGCAGGCGTTTTGTCATCTATGTCAGCGCC TACTCCAGGATCAGTCTGTTGAGCCAAACATCTTTGCCGTTGAGTTTCTTCCTGGTTTGCTTCATCTTGA GGAGGATCCTATTCCTAATGTGAGGCTCACACTGGCTAGGACGCTCACAGAATACATTCTTCTAATCAAT TATTTTGATCATACTGAGAACCCTTATCGGGACGAGATGCTGGCATGTCTTAGTCGGCTACGAGGAGATG AGGATCGGGATGTTAGGTACTATTCCTGCCTGGGACCTTCAGGCGATGCCAAGGTTCATTATGCAGAAGG GGAACTTCCCGTATAACAAGAAGTGGGCTTTCTTCCTCACCGGATGGACTTTCGTACATACTTCCTTCTT CCACAAGTGTGCTGCATACATACTACAACCTCACTCACTGACAATGTGTATGCCTTCAAACCCCCAACTA CCATGCCCATGAATAGCTTTTAACAATAATGATATTCCTGCAAAGCTCTTTTTATTTGCAGAAGGAGCGC TCAGTTAACAGCATAGAGCCTTTGAAGAAAAAAAAATGGCTGGTATTTTCATAGTATTGATTAATTTTAC CTAAGGTAAAGTTAGACCATATTTTCATGGAATGCCAGTAGTCTATCTATTCATCTAGAACAAATGATTT AAATTCTGCAGTAAAAATTATCTAGAACAAAATTATGATATAGGTTTTTAAAAAGATGGAATTTTTTTCA TGGATGTCAAGGCAAACAAACACAAAATAGCATTCTGTAGAAGTGTGGATGAATTTCCTATTTAGTAGAA ATTCATTAGATAAATAAATTTGGGTTAAAATTATGAGAAAACAACGTAACGTCTTTAGACCCCAAGATTT ACACCCCATCATTGCATACCTTGTGGTGGTGTGTGACGTCCACGTATCTGCCATTTTGGGACAATTATTT ATTCACAATGACTTTATTTTCATATCGGTGTAATACCTCAAATTTTCATGCCAGCAGGATTGAGTAATCA ATGCAAGTGTTGAAATCTGTACAGATTGTAAGGGGTATTATGTTCTGTAGCATGAGCAATGCAATTTGTT ACACTGAACCTAACTAATATGTGCAAGTATGAAGCTTTCGATTGATGTTAACATTGATAAATACATGTAT GTGGGAGCTGTTTGCTGTAAAGGTAGATTCAGATTTTGGTTTTCAATACTGTTAGATAATGGCAAATTAC ATTGATATCCCTCATGTTTGTGTTGCGATGGTCACTGGTAGGTCCTCCTAATTTTGTTCTTTATTGCCTA TGATGGGCTCATTTTGCAAAGAGGTGCAGAAGTTGTAATGTGAATTCAAACAGAGATCTCAAATGTTTTG TTTTAAGAAGAGTATAAAAGACAATTGATTTGAGTTTGATTTGAATCTCTGACATCTTTTTGTGACATGT GACCCCTGATCCTGCATTTCGCTCTTCGCTTGAGCTCTTTGCCCTAGAAACCACTTATTTCAATTGCATT AGCCATTCCCAATACTACTATCCCCCTGTTCCTTCCAAAATTACAAACTTCTTCTTTCCGAGTGATTGAC ATCACTGCACATTTGTGAGATTTACAAGTTCACGACCACAACGAAAGGCCTACTTAGATTTAGGAAGCTT CTCTGTTGTGTAGTGCACTTGTGTTAAATGCCATCTTAATTCGATGCTTTTTTGTAATTGTACTAATCTT CTCTTGACCTGTCTGGTTATGTCCCATATTTGTCCATATTGGAAATCCCCATTATGAATGTAGCTTCTCT ATATATATATCCCTTCATTGTTTTACTGAATAGATATCACATCAGATTTATCATGATGTATGATAATGAT GTACAGTTGCTTGTCATCTTTCATTTGTGGCATATTCTTGTTATAAATGAATAATTCAGAGTGATTTCAA ACTATTCTTAAGTCATGCATTGAATTTTTAAATGTCTATTTTATAGTATGATATTGTCTATTTTTATATT CTTTCAAATGTGTGTACCGTTTTTTCTTGGCATATTTTTCATCCTACCAAAGTGTATATATCTGATTGCT TTTTTTTTTAATTATAAATCCTGAGCAAGCCATTTTTAAATTCTGAAATTATAAAACAATTTGAATTCAT TATTGAAGATTTCATTGAAACCAAAATCATGAAATATAAACCATGACAATACTTAAGTGTGTCTGATAAA AGTGATATTAAACCATTTTTTCCCCCACTGAATAAACAATTACCCAATGGAGTGTTTAATCTACAAATCA AATACTGTTTAAATTCACCATATTCTATCAACCTTTGCTCAATGGTACTAATCAAGTACTTTTTTTAGGA AGCAATATAATGAGTTAATCGCACAGTATTTACTTTGCAAGTTCATGTCATGTGCATGATCCATTTATTT TTTCAAAGTATATTTTGTTAACAGTATATAGTTTCTCTTCGTTGTATCTGTACTATGTTTTTATTACTAT TGTTTACATTGAATGATGCTGGTTTTGTGTCATGCTGCATTTATTTTATCGTAGATAGCTTCAACATCCC CGTTCTCCTGGATAACATACAAGATTATCAATGCTTTATCAAACATGGAATAATTACCAACAAAAAGTTA GATTTTATTTGAAATAATAATATATCTTGAGCAATTTCTCTTTTGCTTGCGTGATGCCAAATAAATCAAT ACCTAGTTCCAGCAGTAACTCTTCTGTGTACATGCCTATGAGATGACACCATCAAAATTCATGAATCTTC TGAAAGAAAGGGATAAGTACCATGCACTCACTATGTGTTGCCTTTTAAGGTAGACAAAAGTGTAATCATC CTTTATGTTCGCTTTAATTGCTTGTTTCTCACATTCTTATCCAACCCTTTTTGTCTCGCTGAGAATACCA TCAGAATTCTGATTGCTCAGTACAGACCGTACTATTGAATTTTATCAGTTACTCTCATTTTACTTGTGCC TTTTATTGTAACGTGTGTGGATCAGCACAAGTTGTGTTTCAAATGGTTTTTATACAATGGTCATAATCCA GATTTTATGAGTGATCTGTATGATGGATAGTATTACATGTCACTTTTTAATGCATGGTTTATGCTCGCTG TTCGTGAGTTCATCAAAATCAGCAGGTTTTTTTTTTTGTTAATTTCACCATGCCCATATAAATCTGTTGT AATAAAAAGCTAATATTTCTAGAATTGTCTTTCATCGTGATGGATTGACGAAGTGAATATACTTAATAGT ACTTGATATATTAGCAATGTGCTATTGGGAGTGACAGTTTTGATGTATTGCAAAAATATTGTATCTTTGT TTTTATTGTAGGTTTCATTAATAAAGGGACATGTATGTATGATATTGAAGACAACAGAAAAAATGATTAA TATATAAGCATACTTTAACTATGACTTGTTAAAACTGTACTACTAACAACATAACACTGTATAGGGTGTA TGAAATCGTTGCTGTTAACTTTTATAGTCTGAAGAAAATGTGCAAAGGTAGAACATTGAAAAGAAAAATG AGATTTATCATGTTGTGTATAGTCCAAAATTAAATTCTGAATTGTATGAAGATGAAA
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???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds