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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JI422565.1 TSA: Lytechinus variegatus isotig09389.Lvarbgast mRNA sequence ACCCTTGCGTATGCGCTACTGACCTTTCTCATGACAACAAAAAACTAAAATCAAATTCTTTAAAAAGGTT GGTGCACAATTGTTTCAGAAAGTGCAAAAAATATGTTTAGAGGACAAGCTCAAAACATTCTTGAATACAG CTCTTAACATGAACTAATAAAATTATGACATTATACAACATCACCATAATGAAATCATAATGCCATCAGT CCTGTTAAACATTTGTGTTGTAGACTCGGGTGTATAATGAATGTTTTAAGCCTAAGTAGGCAAAATGTCC TGCCCTGAAACTTTCAATTTTGTACAGTGACATAAGAGGGTCATCTCATTTCCCTCGCCCTAGAAATTGC CATGCATGGTGACATGCTAAAGATCAGGGTGGCTAAATAAAATTTCTCACATAGATTTTATACAAAATTT GACCTTGACCTTCAAAGCTTCAAAACAAATCTCATTATAGGAATGTTCAATCCATATTTGATAACATATT GTGGGCTAGATTTTTATCTCTCACCTCTCAAGTAAATAAAATGTACAATCATATGAGGTTGAAGGGGTGA TTTCTGATAATTGACCAATAAAAAAAGGAGACAGCATGATATCTAATGACCAAAGGAAAATGTAATGTAA TGACCCATTTTCAAAATCTCCTTTGTATAACTGATACTGTAAGAACTACACACTGCTATAATGATGTTTA ATCAATTTAAAAGAAAGGGATATTCACATGGACAAGACCCAAGACTTCACAATATTAAAAAGTCTGACAA TACTCCTGTGAGGTGAACTGGTACAGAGTGTATGTTGTGTATGTTAATAGGACAACTAAAATATGTTAAA GATGAGAAGGTATTTGAAAGCCTGGTATCAAAAGTGTCTAAAGACACTGTTTGAGGTAAACTGACTCTGA CTGCGATCTAACCTTGGTCTTTTAGGTTTAGGACCGGAAGGTGTTGTCGATGGTCCTGATGCACTCGCAG ATCGCTTCACTTTTGGAGGTTCTACGACACTGTCTTCTCCTCCAAAGGAAGCTTCTGCTGACTGAAAGAC AAAGTTACGAGTGCTTCTTGGTCCTTGAGGGTTTGTGACTGGTTTCAACATGGAGGCCATCTTAGCCAGG TCATTCTTGCTTCGGGATAAGAAGGATCCTCTTTTACTCATGATTTTCAGAGGTTTGGGGGTTCCAATCT TATTCTCTTTCTTCTGTTCTTTTTCTTCCACTTCTTGAGTTGGTGTCTCAACCTGTGGTTTCTTGAAGGA TGCTGCCCTGAGACACTTTGCAAACTGACTATTCTCATCTAAAGTTGGGGTCACTGAATCTGGAGTCACT GCACTGGTCTTCTCCTCATTTTCTTTCAACCACTGTTCTCTCTGGTATCTCATCAGTCTCCATTGAGTAT CTTGATCCTGAGCATCTTCTTCATCTTCCTCCCCATCAGAGCCTGGTCTAAACATATCCATCTGGGAATC CATATGCCGCCATCTAAACTTGCGTGTTCTACCCTTATTATCAGAATGCAGGTCTCCGTCTGGAAGGTAC ATCTCCTTGAAGATTCTCAATCTACGAGCATCGTCATCATCCATGGTCTTCAAGTGGACTTTGTTGACTT GATTCCTCAGCTCATCTTCATCTCCCATTTCCTCATTGACGATGCCTTCCAGATCTTCATCATCGGGTTC ATCTTCGGCATCATAGTTTTCATCGCTATCGGCCTCGCTTCCTGATAGCTCAGCTTCATCCTCAACAAAG TTCGCTAAATTGAGTTTCTTGCCATACGTCTTCCCTTTGAAGCCATCCCTGTTGAATTCAAATTCACTAT CCAAATCAGATTCATCCCCTCCCTTCTCTGTCTCCTCCTCCTCTCATCATCATCGCTCTCGTGTTGTATT ATCCTGCGCCTCTTCTTGGGAGCAATTTCCTCATCACTGCTCAGTCCGTTGTGGACGTCATCATCGCTGT CTGGTCCGTCAGGGTCTGAAGCGATGTGGAAAGAGAGAGGGTCGTCGTCCTCCTCCTTCTTGTCTTTCTC CTCCACCTTTCTCGTTGAGCTGACCTGTGACTTTGCTTCCATCCCAGTGAATGTCCCTGAACAAAGGTCT AGTAATTCATCCATGTTGGCTTGAGTACCAGGTCTTTGCGATACTTGAGAGAATGGTCCCGGCTTGTCAG CTTTAGAATCATCCACACCTTGTGTTGCAGTGAACTGTCCAGAACACAGACCTAATAGTTCATCCATACT CTCTTGACTCTCCCCTTTCTGAGTTTGAGTATTTTCAAACATAGTCTTCATCTTCTTGGAAGATGACGAC GACTTCAAGTTGAGAAGTCCATTCTCATCCAAAAATTGTGTTTGGGTTTCATCTTCGAAGGAGAAATGGA AGCTCTGTGATTCTGTGACCTGCTGCGAGTCATTAATGGTTGGCAGACAAGGCGAGTCTTCACGGAATAG ATCCTGCGAGTCTTCAACAGGTAGGGTCAGTTCATGACGGGAGACAGTCTTAGCTGAGACACTGCTGAGA GTAGACTGATGTCTGGAGAATGGAGTGAAGGTGTCACTTTTGGTCGAATCTACACTGGTTCTTCCAGACC TGGTCATCCCACCCTGTGGTTGATGGGCCGGTATCAATGATGTCATTGCTTCAAAGCTCGTATCAAGACT ATTGGAGCTGCTGTCTTGGCGTACCGGCGCTGGCAGAACAAAGCTCATACTGTCTTTGCTTGAATCTGTC TCTTTACTTGCACTCCATGTGACTTTTTTACTACTGGAGTCTACTCTACTTATGGGAACCTGGAAGTCAC TAACGGTAGAGTTTGTAGCACTATCAAACATCTCCATGGTCTTACTACACTGGTCCAATGCTGACAGAGT CCTTGGTGTCTGTGCTGAATTAAAACGGCCAGAATCTTGTAAAGCATCGCTTATTTCAGTATCAGTATCT TCTGTGCCTGTGGAGTCCAAGCGTAGAGTTATTCCTTTCTCTTCCTCACCATCATCAACATCATTGACCA CCATTGCCCTCTTTGCGGTTCCTTTCCTCCGGCTTGGAGAAATCTCATCATCGCTATCGACTGGGCAAGA CACCTTATCAAGTGATCGGGACTTCTTTTTGAGCTCCTTGACAGTGGTATCGTCCTCTTCTTCCTCTTCA TCATCCATGTCATCATCTTCATCATCATCACTTTCGGCCTCTTCATCAAGGAACTCATTGCCAGGCTCAT AATCTGCATCTTCTTCTTCCTCCTCTTCATCGCCTATCCCTCTCTCCTCCTCTTCCTCTTCGTCCGTGTC ACTACCTTCTGTCAATTCTGCTTCATCCTCATCGTCTTCTCCTCCTTCAAATCCTTCTTCATTATCAAGC TTAAAGACCTCTTGTCTCTTCTTTCTTTCTTGCTCTCTCTTTACCCTCATGGTGGCTTGAAGGTTCTCCT TCAGGCGACAGAGTTTAGCACCTGGAACATTTAGTGTAGGATCTAGTTCCTCTGCTTTTTTATCTAATCC AACAGTGAAAGTGTGATGTTTCAAATCTTCTTTTCCATCTTCTCCTTTCTCTTTCGTCACAATATTGACT TGAACATCTTTTTGATGTGTCTTCTTGACATGTTTTGTATGCTTCACAAAGCGCTTCATCAGCTTGAAGA TGCCCTTCTCTTCTGCTGAAGGCTCCTCCCCTTCATCCAAATCAATGGTAATCTTAGGTCCGCCACTAAG CTTTGGTTGTGCCCCTTTTAATCTGTTCAGCGATTCCTGGAGGCGTTGCAACCGCCTTGCCTGTGAAGAC TGAGGGTCGGACTGAGTTGAGGTAGTAGGAGGTGGAGTCTTGAACAGTGGCGTCTGGATTTCTTTTGGTG ATTGCTGTGATGTCTCAGGCAAGCCTTGTTCTTCTTTGGGAGATTCATTATTTGATGGTTCTGTTGGCGA AAGCTCTTTTGTATTTGAGTCTGATGATACTGGAGAAGTAACTGATTTCCCATCAACTACTGGAGTGTTA CAGCTACTTTCTGCTTCTGCATCTTGCTTCGATATATCATTGGTTGCCTCTGGCTCAGTTTCCACTGCAT TATCAGTATCAACCTTATCAGTTTCACTTGGTTTGGCTTCTGCCCCAGCCTCCATGGAAGAGCTCTCAGA ACTCTCTTCACAATGGACTTTGTTTTCAATATTATCTTGCACTTGTGATGTTAACAGATCCGGAAGGTCA TCAATTTCTTCTGTGTGAATTTTTTTACTGTACTTTCTTCCTCTGTTGAGGTGTTCAATAACTCTTTGCC ACGAATTCTTGGGACTCTACATCCAGTGGGCTTCAATGAAGTAAGACTTGGCTTTTTGTTGAACAATTCA TCCAAACTCAGAGGTTTGGGGTGATGATATGGAATCTGTATTGTAGACTCTCTGACAATTCTTTGAGATT CACTATGGATCTGCTGTAGTTCATCCTTGCTGATTCGTTTCCTCCTCATAGACCTCTTATCCCCATTAGA CTCTTCTTCCTGATCTTGAGGTGGTGGTGTTAATTGGAAAGCTATTTCTCCTTCCTCATCCTCACCACTA CTACTATCATCACTGCTTCCTACAGTCCTTCCACTTTTCTTTCTTTCTCTCCGCTCATCATCATCATCAT CAGTGTCATTGTTACTGCTATCACTTCCTTCGTCGCTTTCACCACTGCTTGGTACATGCCTTCGAATCTT CTTTTTTTCTTTCTGTTTATCATCATCACTTCCTAGAACATCACTATCATCGCTACTCCCCACTGAGCGA TGAATATTCTTTTTTCGTTTGGGTTTATCATCATCATCACTCAGGCTATCGTTCTCATCACTACTCTGTA CTCGTCTACGAATCTTCTTTTGTTTGGGCTTGTCATTGTCCGATTCATTATCGCTGTCATCTTGTTGACT ACCCTCCATTTGATCAGCATCTGCTTCCTTATCTCTTTCTTCTTTTTCACTGTCAGACCCTAAATCTCCT TGATCCAAAATACTTGGTATTTTCTCTTCATCTTCATCATCACTCAGGATAAGCCGATGAGTTTTAGTGG GTCCCTTCTGTCTGGCTTTCATTCTGACTATCTCCTCCTCATCACTTTCATCATCATCTGCATCAAACAG GTCAGAGTTAATCAAAGGGTCTGGTGCCCGTATTGGAGCTGATTCTACACCGAGCATGGCGAATTTGTTG AGTAGAGTAGCTTGAAAAATAACCCTTTTAAGCCTAAGGAATTCCAATGACTTTAATTGCAGTAGAAATA TTGAAAAAGGAAAATGTCACGCAGTTCATAGATTTTTGTCTTTCAATTTATTTCATGTTTTCGCCCATAA ACATGCACATATTATATATTCGTATGCATGCTATCATTGATAAAACATAAACTAAAAAAGAGAGAAAGTC TTTGTTCGGTATTGCCATCCTAGCGTAGCTACTGAATTTAATGACGGAACGCCGAGGCTAGGAACAACTC GCCACAAGGGGGCGTTGGTCGACATCAAGAGCGTGTGACATTAACTGTCATCTGAATGATTGAAGCACTC GTTATCACGATAGTTTAGGACTTCCTGAGTTTGATATACTACTACTACT
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???blast.matrix???
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???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds