Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_041597815.1 PREDICTED: Lytechinus variegatus telomerase-binding protein EST1A-like (LOC121406940), mRNA ATGCCTCCCCCCTTGATGCCGTCACTGGTATCACGAGGGGCGACCGGAGCCCCCGGAACCTCGTATTTAA ACATTGCAGATGCCAGAAGCCAGCGCTCCCGCGCCCTCTATCGTTCAACTTCACCGCGAAATGCGAAAAT GGCGACGACGGGCAAAGTAGAAGTTGTCAAAGTTACACATAATCAGCTGAAAAGAAGGGTGGAAACTCTG AAGAAAGATGCAGGTCATGAAAGGCGTGAGGATCCAAAAGAGAAAGCATCCTCACAGATGTGTGCAGCAG AAAAAGCAGAGAAACATCCTACCAAGTCACGTTCTACAAAGGCACGTAGGGAAAAGGAACAGCGAAAGCC AGATCAACAGTTATATAGGCCAGGCATGTCCCGTATAGCAAAGAATTCTTCATCGCCAGGAAGTGACTTG AATTCTAGCCGAGAGGAATCACCAACCAAACCTGTCCAGGATCCAGTCAATTTGAGTGAGATTGGATCCA AAGGGGACCAGGTCTGCAATGTTCATGAAGAAAATCAATCCAAAGAGCCAGCCCCAAAAGAAGAGGCAAC GCATGGAGCTGAACCTGAACATAGCAAGAAACAAGGATACGAGAGGTCAGGGACAGAAAATGCACAGAGA GGAGGCAGGAATAGCAGTAGGAATGATCAAGTTGACAGACAAGCCGAGAGTGGTGGTAGCCATTCCCATT GTGGATCAAGACCATGGGATAAGCAGGAACCCGTGCATCATAGAGAACAACAGGGTTCACGTAGACCTGG TAGAGAGGAGTCTTCAAAGATGTCCAGGGTTGGGAAGGCACCATCTTTACATAATGAACATGCAGATGAA GACACCTGGGAAATCAAACCAGAAGATTGGGAAGCAGAAACTACATGTAAATCTTCAGGAATCAAGCTCA ACAAGGGTCAAAGTGCACCTAAACATGCGCAGAGTCGCAATAGAAGCCAAAGTCACCAACAGCATGTGCT AGGTCAGAATAGGAATGATAGCCCACCAAAACAAGTGCATAATCGCAATGGAAAACAAAGACCTAGTGAT GACGTTAGAAATAAGGATAGAAAGCAAAATGTTGATGATGATCCTAAAGTTCCTGAAAAGAGACCACAGG AAATAAAGAGTTTGATGGGTAGTGATTGGGATAAGGAGTTCGAGCAACAGTACCAAGCTCAACATTCCCC TAAGAAGACAGACCCTCGTCATAAAGTTACAAAACAAAAAGAGACAGTAGAACAGCTTCCACAGAGCAGA AGAGCTTCAGGGAAAGCTAATGCTAGACAAGACCATGGACCAAGGACAAGCAACAAAAAGGGTCACTCAT ATTCAGAGGTAGACTCATCACAACATGAGCCTAAGAAAGATCTTGTCAAGTCATCCAGGCAGAATTATGC TTCAGAAATACAGAAGCTACGAGCTAAGAAAGAAATGATGGAAAGAGAGAATTCAAGTCAAGAAGAATTT GAAACTGTGTCTAGTGCAAAAGATCTACAGATTACAGTTAAAACAGGGTCTGAGGTTGATGACAGATTGC GGGTGGTACAGGAAAAGCCTGCCAAAAGCTACTCTTCAGGTCAGTCTCGGCAGAGGATTGACACAGACTC CAAGAGGAATGAGAAAACTGATAAGGGACCTGTTTTGACAATGTCTGGTGAATGGGAGGAAGAAGTTGAT GATCTTAACTTTCATGTTGAATCCATGGTCATTACTAATCGTAAGTTTCAAAAGAAAGAATCTGATAAAC CTGGAAGATTTGATAGACCTTTTCAAGACAGGACGCATCCACATAGAGATGAAAGATGTCAAAATGAACA TTATGATGACAGAGAAAGACTGTCTGAGAGACCAGATATTGAAGGAACAAGACCACCAACAAGAGATGAA AGGTCTCATATGAAAAATCGTGATGAAGTAGGTTATGGCAGATCGGATAATAGAAGACCGAAAAATAGAA ATGACAGGTTTCAAAATAAAGATTACAGTGAGAAAGACTTTGAGAGACCACACAATGATAGGCGGAGACC TCCAGACAGAGATGAAAGATATCAAACTGAATATCATGATGATAGAGCCTTAAACACACCAGATATTAAA GAAACAAGACCATCAACCAGAGATGAGAGATCTCAAATGAAAAATCGTGATGAAAAAAGTTTTGGGAGAT CAGATAATAGAAGACCATCACAAAGAAATGACAGATTTGAAGATAGAGATCTTAGTGACAGAGAATATGA GACACCACATGAGGATAGGCGAAGACTTTCAGAAAGAGGTGAAAGGCAAACTATGCAACATGATTCACAA ACGTTTCATTCAGGAAGCTCCAATAATGAAAGAAAAGAACAAAGAAATGACAGGAATAGAGATAAGGATG AACCATACCTATCAGGGAATGATAGTCGATATAGGAATAGAGAGGAATCTTACAGACAAGGACACAATAA GCAATCTGTGGATTCAGGGCGATCTGGTAAGTCTGGAAGTGACAGGCAGCATACAAATGATGAAGATTCA AAACGATCAGGAAATGGACGTCATGAAGATGGGAGAAAAGCTCCTGATAAAAGGTATGATCAAGACGGAG GTCGGCATAGTGGGGAACCACAAAGACACCACAAAGACCAAGATGAGCGGAGGCGCTATCACTCTGGGGG TAAAAAGGATGCAAGGAGACATCACATTTCTGTGTCTAGCGATGATAGTTCTGAAATACATGGGAGAAGG AGAGGCAGTAGTGAAGCTGAGGAGTCTGGTACTAAGCATGGAGGGGGTATACTGAGGCTGCCTGGGAAGA CAGAACAAGAGAAACCTAAACCTCAAGGTAATTATGCTCCTGTGTATGATCAGTACTATCATCCTCCTGA GGAACATACTGATGCACCAGTGCTTCCTGATGAATTGAAGGCCAAGCCAAAGGGACGTACTGGTGACCAA AGCCGCCTCTGGGACCCTAGTAAGCCAAATCAAAAGCCTGCTTTGCAGCAGCATCAAACGAAGCATGGGG AACTGCATTTCCAGGACCCTGAGTCAGACAAAGGAGAATCCAGGGGAGAGGGAACACCACCTGCCACCTT GCAAGAGAATTGGAATTCATACATTCCAAATTTTCCACCTGGATTTGCTGGGATGGTGCCGCCTCATTAT GGGTACCCACCTCCTCCGCCTGGCTACTCAGTGCCCACTTCTTCCTGGGAAAACCAACCTGACAGAACCC AGTCTGGTAATTCTCCCCTTCCTCCACCTTATATGATGCAGTATCCACCACCCTACGGTAGACAACCCCA TCCACTACCCCCTGGGATGCCATATCACCCAGGATACCAAAATCCGCCCCATGCTGCCATGATGCAGGAG CACCTGTCTGTGAACCGGCAGTCAGCTCAGAAACTCCTACGGGATGCTGCTCGTTGTGAGACGGACCTCT TCAATGCATTGAGTCATGGCATCTCAACCAGGGAGATGCTACAGCAACTCCAAGGCAAGCAGCAAGAGCT AGAACAACTCTATGAGGGCATCATTCTCTTAGACCTTGACCTGTGTAATCAGTATAATGTAGAGCAGATG CTGTGGAAGAATTGCTATTATCAGATTATAGAAGCCCTGAGAAAGGCCATACAGGAACAACCTAATGGAG ACAGCTACAAAGAAGATCTTCTAGATTTTATGCATCATGGTACTACGTTCTATGAAGGGGTGCTGAATAA GCTGCAATCAACATATCACTTCCAGTTAGAAAATCGTACCGGTCTAGATCCCCTTCATGAAGAACCAAGA AGATCAATTAAATTGGCCCTATTGAGTGCTCAGAGATGCATGATAGCACTTGGCGATATAGCCAGGTACA AAGAGCAAGCCAATGAGACCAACAACTATGGGAAAGCAAGGAGTTGGTATATGAAAGCACAGCACCTTGC TCCAAGGAATGGAAGACCTTACAATCAGCTAGCTATCTTAGCCTTGTATACGAGACGTAAACTTGATGCA GTCTATTTCTATGTGAGGAGTTTAGCAGCTACCAATCCATTCCTTACAGCCAGAGAAAGTTTGATGACCT TATTTGAGGAAGTCAGAAGGAAGGTTGCTCACAAAGAGCAAGAGGAAATTGAGGCAAGGAGAGAGATGGA GAGAAGAAGAGAACAGAGGAGAAAGAGGAGGAGGCCATCTCAAGATGAGAACAGGGGAAGGAAAGAGGTC TGGATTGCTCACGATGGGAAGGTGGAAGGAGGAGAGAGGATGGAAGAGGAAGAAGATGAAATAGAGAAAT GGGAGAATCTATCTCACCTTTCGGCTGCTGAGCTCAACAAGAAGTTTGTGCTAAGTTTCCTGAATGTCCA TGGGAAGCTCTTCACAAAAACAGGGATGGAGGCATTTGGTCATGCGAGAGATCATCTATTGCGAGAATTC AAGGCACTCTTAGACCATTCACCCTCAGCTATCCTGAGTACAAGACTCATTCAACTCATGGCTATCAACA TGTTTGCTGTAGCTAACATATCTCCTTCAGGTGACATCCCCCCTACAGCCGAGGGTTGTCCACCTCTCCT ACAACAAGCCATCCTGCTTGGTCTTCACATGTTTGCCTTACTATGTTTAAGATGCTGCTCACTCTTACAA GATCATCTACAAGAGCAGAGTGGAGATCAGAGTGTGTTGTCTCAGGATCTTCATGAGCTGCTCCCTGGTG TCAAGGTCTATGCTGACTGGATGATGTGTCATCCAAAGCTTTGGAACCCTCCTCCCAGCTCAGATACTAC CTCCTATTGTGCATCGCTTGATGTTTGGTCTTCGGTGGCACAATTCTTGAACCTTGTAAAGCGAGTGCCT GTACCTGATGTTAAGTTTGCTGTCAATGGTGAAGAAGACAACTTAGAAGTATTGTTACCAGAAGACATGG CACTGTCGGGCTTTGTACCTCTTATGGCTCTTCCTCTTCAACCTGTATTCATCCAAGCTGATACATCCAA GATTCTTGCCAATGATCGTGTTCGCCTGGACTCACTGACCATGTTTGGTGAGTATTTGAGTGGACAAGAG ACCCCTCTTATCAGCTTCTCAGTCAAGACGGATTCTTATGTCTCAGTAGCACCCAAGGCACCGCCCTCCA GAGAGACAAATCAAAGCTACCGTCAAGAAGAAGATCATGAGATAGGAGGATATGACAATGATGATGTGAT TGTGATGGATTCCTACACGGAAGATGAACCACCTCATGGAGATGGTACAATCAGTAGATTGAGAGAAAGG AGAGACAGTTTAGAGAAACAACTCAGGGATAGGGAACTAAGAGAATCCCATATTCAGGCCATTGTTGAGA GTCACCGTTCCCAACGTCTTCTGGAGATAGTCATAAAGCCTTACTATCTTATACCAGACACTAACTGCTT CATTGATCACCTACCAGCTATCCAGAGATTGGTGTTATGTCAGAGATACCTCATGGTGGTCCCTCTTGTA GTGATCAACGAGTTGGATGGCCTAGCCCGTGGTAGTAGGGAAGGCCAGTACAGTGACCCTCACCATGCGG TCAAGGTTCAACATGGAGCTAGGTATGCTGTAGAGTATCTTGAGGAGGAGTTTGCTAACAGGAACCGTTA CCTCTGTGCCTTGACCTCTAAAGGAAGTATCCTGGACAGTATTAGGTTCAGGAGTGAGGATGCTGATTGG AGGGGTAACAATGATGACCATATTTTGAGATGCTGTATGCATTACTGTTTAGATGATCCAAGGCAATATA TGCCAGCTGATAAAGATGCTCCTCTGCAGATTAAGCGAGAGGTTGTTCTGTTGACGGATGACCGGAATCT GAGGGTGAAGGCTATCCAGCAGAACGTCCCAGTCAGAGACATCATCATGTTCATCAGATGGGCCAAGGTA TGAAGGAAGTCATCCTGGAGGATGTCTTCCAGAATGTAACAGTTGAGTTGTTCAGCAGTGTTCATCTAAA TCTTGATGATAGACAGGTTGTTTAAGCTGGCACCAAAGATGAATGATTGCAAGTAGTTCAGAGTGATGCC ACTTTACAAGCTGAAGCATGACTTCAGGCCCTTTCATTTATTGTCAGGCAATGCAAAAGTGGACTTTAAA GATTCATTCTATAATGTGCCATTTGTATGACTACTTTAATACGCAAACTCTCTGGGTATTTGCATTTTGA TCAAGTAGGAAGAAAATTTGTGAGAACAAATTTAGAAGGAAATACTGGGCATACATGCATACCATGTGTG CATGTACAAGAAAGACCAGTGTGATGAAATTTCTTTCCTTAAGCAACTCCTATGTTTGCAATTGAAAGCT AAAGTCTTATTGCTCTTGTGCATTTACCTGGTTCATCAGCAGGCAGAGGGACTTGGCACCCTATTAAAAT GAATTGTTATTACAGGCAATTTGTAAAATACATTGCTGACATCATGTAATCTTGCCTCTTTTTTTTCCTT AGATTTTTCTCTTGTTCCTTATAGAAGAGAGTTTTCATTTCATTTCAGAATTTTACACATTTTGTTGACC TAAATAGACCCTCTCGATAGCCTTGTATTTGGGACTGAGTGTCATTATGCTGTTCCATTATCATTGATTC GATTCCAAGCGTTTTAAATCAGCACCACTTCCAGGTCTTTCACTCTTATAACAGTGAATGAGAATGCCCA ACCAATCAGCCTCTTTTTCCCCTTTTCCATCCCTTGATTGGCGAAATGCATAACCACAAGCCAATTATCA GCTGGCTGCAGGGTCTTTTCCAACTTTCACTATAAACCCAGTGTGTTCATAATATTCCTTGTATTTTGTG TTCACTTTTATCAAGGAATAAAAAGTTGTTGCAACCCATATACTACTGCTCGGGTGATGAAACCTCATAT ACCATTAAAGGTCGAACAGTCCTAGTTGAAATACACAGCTGCGTTAACATGGTGTCTGACTGGAAAGTCA TTTTATTTTTTTATTTGGCGTCCTGTGTGGATGGCTTAATTTTTGAAGATAGAGAGAGATTTGTGTTATT ACTTGATAAATCATCTTTTTTCTTAAACGAAAAGTGAATTTTCCAAAATTGGAGACAGAAATCTTGTCAC CCTTGTGCCAATGTTTGTTTAATGGAGTGTTTAATTAAGTTAGGTTTTTGTGCCAAAGATCTTTCATTCT CATGAATAATATGTATCCACATCGTGAAGGTCTGTCATAACCTGGTCTTGATTCTCATAATGTTGTAGTC TGTCACAAGGAATGTAAACAAGCATTATGAATCAGATTTTATTGGGCATAGACATAGGGGGAAATTCAGA TGATCTCCATGGAAGAGTTGTGACATATTCAAATAAAACTCAAACTGAGATCGATCTCAAAATTATTAAC TAGATTTTCAATTCAATTTGTGTTTGATGTAAATAAATTGCAACTCTTTCCAAGACAGGGCAGGTCTCAT TTTCATGTAAAAATGTATTTTTTGTAGGAATCTTTGCATTATTGGTTGTTTCAAATGATTCTTAGGTGGT AAAAATACATTTTTGCCTTTGTCTGGCACCGTCACTATTGGAGTGCCAATAGTCATAAAATTCTTTGGAT TTATTTATGAATTGAATTTTAGTCAGACAAAAATAAATGAATTTTTCATGTTTTCAGGGACAATCGACAG CCTTAGGTTATAGATAATATGATCTGATTGGTAGGTAAATAGTTCATTTGCTTTCTTAGTGGAACAAAAG TCATAATGTTCATGTCAAGTACTGATAATCCACTCAAAACCTTGTTGAATATCTTGAAACACTTTTATAA AAAAAGAGTTAATCCTTATTTACCATGGACAATCATTTATTATGTACATGTTCTTGTTGCAACATTTTCA CAAGAAAATAAATGTGAATGTTTTTCAAACTA
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds