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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_038223227.1 PREDICTED: Patiria miniata paired amphipathic helix protein Sin3a-like (LOC119746336), transcript variant X3, mRNA ATGAAACGTGGCAACGAGGTACAAGAGGGACCATTTCAGCAACGTCGAGCCACCCCTGGGCAGGAGTCTG CATTCGCCCAGCAGCGTGTGCTAGCCCCGGCTAATGTGGCCGGCTTTGAGCAGGTCCAGGAGGGTAATAT GGCTAGTGGACTGCAGTTCCATCCCATGCAGGGATACCCGGTACCAGCTGTAGGTCAAGCAGCAGGTCAC CATGGTGGGGTTCACCACCCTCACCCTCACCCCACCAACCCCCAACAGGTGGCAGCAGTGGCCCATCAAC AGCAGGTTGTTCATCAAACGCACGCTCAAGCTCAGGCTCAAGTAGCACAAGTGCAGGGACATCAGCAACA GCAGCAGCAACAACAACAACAACAGCAACAACAGCAGCAACAGCAGCAGTACCAGCGACTGAAAGTGGAG GATGCCCTGTCCTATCTTGATCAGGTCAAGCTGCAGTTTGGCAGCCAGCCACAGGTGTACAATGACTTCT TGGATATCATGAAGGAGTTCAAATCACAAAGCATTGACACTCCTGGGGTGATCAACCGTGTCTCCAACCT CTTCAAGGGACACCCAGACCTGATCGTGGGCTTCAACACCTTCCTGCCTCCCGGCTATAAGATCGAGGTA CAAGCCAGTGACCCTACTCGGATCAACGTCAGTACCCCGACTGGACACATCACCCAGCACACCGCAGGGG GTCCACTGACTGGGCCAGGAGTGCCGCTGCCCCAACCAACACCCACTACGCAGCAGCAACAACAGCAGCA GCAGCAGCAACAGCAGCATCCGAATAAACCCATGACACCGCAGAAACAGCAGCAGATACATACGCAACCG CAGTACCACGCCCAGCACCCAGCCACCAAGCCTGCTCACCATTCGGTATCATCCAGCCATCACCATGCCA ACCAAGCAGCTACCGGGGGCCACACCTACTCCCAGCCTCCTCCTACCAACCAGGCCCACCCAGCCCCACC CTCGGCTGTTACGGCGTCTCCCCAGCACGGTCATGCTGCAGCAGCTCAGCAGCAACAGCAGCAGCAAGCA CAGACGCAGCCAACACCGCAACAACAACAGCAGCAGCCCAGCCAGCCGGTGGAATTCAACCACGCCATCA ACTACGTCAACAAGATCAAAAATCGGTTCCAGGGTCAGCCAGAGATTTACAAAGCTTTCCTGGAGATCCT TCACACCTACCAGAAGGAGCAGCGGGCTGTCAAGGAATCCGGGGGGACCTACGTGCCCACCCTGTCAGAG GCCCAGGTCTTTGAACAGGTGGCTAAACTCTTCAAGAACCAGGAAGACTTGCTGCAAGAGTTTGGACAGT TCCTGCCCGACGCCAACGGAGCGGGAATCTCAGGACCTACTAATTTTTCGTTCCAAGACATGATGAACCG CGTGGCTGTTCGCAACGACCACACAGGGATTGCTAAGAAACCTGGCTCTGCCTCCAACAACAAGAATCGT AACAACACCTCGGGAGCAGCAGGACACATAAAGAGGCCAGGCAGTAGCGCTGTGCCCATCCCAACAAAGA AGCCTAAGTCTGGAGCCGTGAAGGACGTCTCCTTAGCTGAAGCAGGCAAGCATGGAAGCCTCAGCGAGTT TGCATTCTTTGACAAGGTACGCAAGGCACTTCGTAGTCAGGAGGTGTATGAGAATTTCCTGCGATGTTTG GTGTTGTACAACCAAGAGATTGTCTCCAGGTCGGAGCTGGTTCAACTTGTCACTCCATTCCTCGGGAAAT ATCCAGAGTTACTGAAATGGTTCAAGGAGTTCCTGGGCTACAAGGAATCTGACAGGATTGACTCGCATCA TGCTCCCAAGGAACGCAACCAGGGAGAACTAGCCATGGAAATAGATTTTGCCAACTGTAAGCGTTGCGGT GCCAGCTATCGAGCCCTGCCCAAGAGCTACCAGCAGCCCAGGTGTAGCGGCCGTACGGCGCTCTGTAATG AAGTCATCAACGATACTTGGGTGTCTTTCCCTTCCTGGTCTGAAGACTCCACGTTTGTGGCATCCAGGAA GACACTATATGAGGAGCATATCTATCGCTGTGAAGACGAACGATATGAGCTGGACATTGTGATCGAGGTG AACGCGCACACAATACGCATCCTGGAGCACGTTGCCAAGAAGCTGTCACGCATGTCGCCTGAGGAGTCCG CCAAGTTTAGACTGGACAACCACCTGGGAGGCAGTTCCGAGACCATCCATCGCAAGGCCATACACAGAAT ATATGGAGACAAGGCGCAAGACATCATTGAGGGGCTGAAGAAGAACCCTGTTGTGGCTGTACCCCTGGTT CTTAGAAGGTTAAAAGCTAAGGAGGATGAGTGGCGAGAGGCCCAGCGCAACTTCAATAAAATCTGGAGGG AACAGAACGAGAAATACTACCTCAAGTCGCTAGACCATCAGGGCATTAACTTCAAACAGAACGACACCAA GGCTTTGCGCTCCAAGAGCCTGCTGAATGAGATTGAGGCCATCTTTGATGAGAGGCAGGAAGCGATGGGC GATAACAACTCCCCACATCTGAGCTTTGTCTACATGGACAAGCACATCGTGGACGATTCGGCTGCATTGA TTATCCATCACATGAAAAGGCACACAGGAATCCACAAGGAGGAGAAGCAGAAGATCAAGCAGCTCTTACA TCACTTCCTGCCAGACTACATGTTCCTGGAGCGTGGAGAGCTGTCCGACGATGAAGATGACCAGGAAGAA GAAACCAAGGAAGCAGCCTTTGCCCTGGCCGGGATGGACACTGCCCAAACTGATACCATCTCGCCGCCGA AAGACAGCAAGAAATCCTCCCTCATGATGACCAACGGACCCTGTGACAATACTACCTGGGATTCGGATGA CGTGTACCACCTGTTCTTTGTCAACAACAACTGGTACCTATTCCTGAGGCTGCACTTCATCCTGTGTGAG AGATTACAGAAGATGTTTGAGAGAGCAGAGGCTATCGCCCAGGCGGAGGGAGGACCTAATCGCAGGGCTG CTAAGGAGTCCACCGCTGTGGCTCTGGGTCTCAAGCAACCACTGGAGATCGAACCCGAGGAATATTACCC GGCATTCCTTGACATGGTGCGTAACCTTCTCGATGGTAACATGGAGAGTAATGCCTTCGAGGATCAGCTT CGTGAGATGTTTGGCATCCATGCCTACATTGCATTCACCATGGACAAAGTGGTGCAGAACATCGTCCGTC AGCTTCAGCACATTGTCTCAGAAGACACCTGCATGGGTGTCATGGAGCAGTATCTCGCTGAGATGAAGTC AGGAGGAGCCGGAGGAACTCACTCCTCGGCCACGGCTCGCGTTAGCGCCGAGTCCGCTTACCAACGACGG GCAGAACAACTGCTGACCGAGGAAAACTGCTTCAAAGTCATTTATAATAAGAGTGATAAGAAGTTAACCA TTGAGCTTCTGGACACGGAGGAGGATCACAGTGATGATCCGGTGGAGGTGGAGAAATGGTCGGACTACGT GGAGAAGTTTGTGAATGGTGAAGACACGTCGGCAGAACTGAGGGACCAACTCGCTAAGAAGCCGGTCTTC CTCACCAGGAATATCCGTAGGACACGGCAGCAGAAAATTGTTACTGATGAAGACTCAAGCAGCAGCAAGG AGAAATCGAGCGATGATGGAAAGCTCAAAGAAGACGAGAAAGCTGAAGATGAGGACGAGAAGAACAGCAC CACCGCCGCAGACAACAAGGAAGAAGGAAAAGAGGAAGAAGGATCATCCCCCTCAGAGGCGGAGCCCAAA GAGGAGGCGGCGGAGGGAGGGTCCAAGGAGGAGAAGCCAGAACCGACAAAGGAGAAGGTGGAGAAAGGGG CAGAGAAGAAAGAGGTGGATCCGCTGGAAGGAGTGGATATGGTCAACAACATGGAGTGTAAGTTCAACCT CAACTCTTACAAGATTGTCTACGTGGTCAACTCGGAGGACTACATGTACAGGAGGACTGCACTCAAGAAA GCGAAAGAATCGCATTGGCGGGTCACCGAGCGCTTAGCCGCCCGCTTCAACAAGTTTCTGGACGCATGGA AGGATGACCACATCACCAGACGCCAAGAGGCCGACGTGGAGAATTGGTTCATGGGAAAAGTCGACGACCT CGTTCCTTGCGAGACCATGGTTAAAGAGGTCAAATCAGCCAATGGGATCAGGAGGAAGTTCGTGGTGGAA TACTACGAGACCGAAGCCCCAAAGGTATCAGGAAATATTGCTTCCTGAAAGTTACCCTTCATCTACACCC CATCCCTCCCTGAAATTAAATATTTATAGACAGAGAAGATTTGGGCTATTTGGACACATTTTTTCTCCCC CAAAAGAAGACAGTTTCATGACGTTGCTTTCTGTAAAAGCTTCTCAAAGGCTGCTTAAGAAATCACACTG AGAGGCAATTGAACAAATTTCAAATTTGTTGAAGTTGCTAGCGAAGACTTGTGAAATTTGTGTCTCTTCC GAAGTTGGGCCTCAACAAAGAAAAGTGGAGACGGAAAACAAATTGGCTTGTACAACATTTTCTGTCAGAT GGACTGTCAAAACACACAATACTTTTTCAGTCTGTGAATATTTTGTAAACAAAAAAAAATAGTCATTTAT TCCTTGTAAATACATTTGAATGACAAACACATTGTACAGAACTTTTAATGTTACTTCGATTGATATCACA CAAAATAAGTTTATCGTAACAGAAAGTATTCCATTTGTAGCTTCATGTAATGTAATCGAAACGTTTTTAT AGTTTTCTGTCGAGTATGTGTTCTGGAAAATGGCTCTTTTGAGGATGCAAGTGTGAATGTGTAAGGGAAA TTGACATTATATCATAGACTGAGCTATATGATGTTTGGGAAAATTCTTTATTTTTGATGTTCAGTTTTGA TCAACACTGAAACCGTCTGTAAGTTGCCAGCTTCGACAACAAAACAGCTGATGAAATTATTCGCTTAGAA TATTGCCGATGTACAGATCTGGAACTATTTTACTGCAGTTGTTTTGAAACAAGCTGGGGTAAAAAAAAAG AGAAAGCCATTTACCGAATTGAAAATAGTGCTGTGTATTTTTGTCACTTGGTTCTCTGCTCAAAGATTTT AAAGAATATTGTAAAAAGTTCATAGTTTGTATTGATATGACTTCAATTTCACTCTAGGTGAAGGATGATA GGTTTAGTTTAAAACACTCTAGATTAGTCAAGGTCGTGTCGTGAGTTCCACTTTTTTCTCCTCACTGAAC GAAGGGGCGACCACATTTTTGTCAGAAAATATTTCGCTACACCTCAGGTGATGCTGCTGTTTTGTTGCAT TTTAAGTGGTATTTAATCTGGCCAATTCAACACCCAAATTTGGCTGACAAGATTACAAAAAAAATGAAAG GGCCTTGTAAAACTGATCCCAGAGTGCACAAATTTGATTCAGTTGCGAATACTGTCCACCAAAAGTCTTA TTGTACATCTGGTGTATACTGGAGCCCGGATCTAGCCCATAACGTGGTTATCCTATACAGTAGCACTGCC CAGCTGTCTTCACCAGCCAACCAGGCTGAGTGAGATAGGAACAAAGAGGGCACAAGGCTGGCCCTCTGGG ACCAGCAAAATCACAAATTATTACTTGGACGAGAATCATAAGGTGAAAATCTCAGCTTGGGGCACACCTT ATAGAAGAGTTTGAAATTGTCCATTGCATAAAATATCGAAATCAGTATGAAAAGCCACACAATTATGCCA CTCTTGTTAAAACCATTGTCAAGCTTATGGATTAATTAATAATACCAGGAAATATAATCTGACATTAACT CCATTTGTCAGAAATCGTCATTACACATAAGATAAAAAGTAATTTTCTGAAATGGAAACTTACAACTATT TTGAAAATTTCCATTCGCTATTTATTTATTGAAATCTGGTGGTGTTTTTCATTTTGGAAAGGTTTGAATT CACGTTAACAATCCAAGGACATTTAGCCACAGATGTGAGACTGGTATGCTGTCTTAACATAAATGAAGTG AGGAATCTTCCAAGTAACAGATTTTCAGAAATGGAGTAATTTTAATATTTTTTCGGACATTTGTACAAAG TAACATGTATTTCAGTGTAGGAACTTCTGAAAATAAAACTGAAAAATTGTATTTGAAATGGTGGTGTTTG TCCCGTTCTTCATTTCACTTGAGGTGGATTGTTGGGAGATTTCAGACGTGAAAATCGTAGACTTAGTTAT AGTTTATGCTACAACACAACAGTGACACCTGTATACTGGTGAATTAATTATGAGAAAGCTTGTTGACAAT ACAATGTACATATAGTTGATTATCTTTCTGTGTAGACCAACACATACCTAAACTGACCTGATTTGGCAAT CGGCATATACTCCCTAGGCACTTGTGTCAAATATGGAAAA
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
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???blast.gapedalgin???
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Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds