Click here to close
Hello! We notice that you are using Internet Explorer, which is not supported by Echinobase and may cause the site to display incorrectly. We suggest using a current version of
Chrome
,
FireFox
, or
Safari
.
Echinobase
???banner.login???
???banner.register???
Contact Us
Cite Echinobase
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
Genes
People
Labs
Organizations
Paper Authors
Paper Titles
Echinobase Accession
Anatomy Items
Disease Ontology
OMIM Diseases
GO Terms
BLAST
Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
JBrowse2 Tracks
Genes
Gene Search
Gene Search Tips
Gene Nomenclature Guidelines
Gene Name Questions
Expression
Search Anatomy Items
Quantitative Expression Datasets and Plotting Tools
Anatomy & Development
Search Diseases
Echinobase Anatomical Ontology (ECAO)
L. variegatus
Atlas of Development (pdf)
Resources
Protocols, Reagents and Data on EchinoWiki
Resource for Developmental Regulatory Genomics
Davidson Lab Gene Regulatory Networks
Libraries, Vectors and Screening
BAC Table
???header.navigation.searchAntibodies???
???header.navigation.searchMorpholinos???
Guide RNAs (gRNA)
Cis-Regulatory Elements (CREs)
Literature
Papers
Books
Cite Echinobase
Community
Find People
Find a Lab
Organizations
Job Postings
Downloads
Data Download
Gene Page Reports
Browse Download Site
BLAST Databases
???blast.header???
Download BLAST databases
???blast.alignment???
???blast.program.blastn???
???blast.program.blastp???
???blast.program.blastx???
???blast.program.tblastx???
???blast.program.tblastn???
???blast.database???
-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XP_038076858.1 adhesion G-protein coupled receptor V1-like isoform X2 [Patiria miniata] MGNTRPYRGTMLAHLALLMLLVSTVSSQSATVSFVESAITIQEGGAATVRVQKTGDSPGEVRVVVGFQDQ MAANADFVGNNFVLSFPAGSATSVQEGTFYSSDDDNPEPDEPFSVTMTVISGGAVIGDPSTTTVTIAAND DAFGVIGFDVVSPMRVTEEQSSTTLLLPLKRERGTFGLVAVTYQITGGSGTASGDLTPVTGSVTISQGIS TDALRIVILADLIPEDDEEFTVELTSVSGGATLNSSSQSVLLIINANDSPLRFAQPQYSFPENAGTVTVE VQRGLDTDGLTPLGPSDQTVTVEYWFYSGSAELGVDCVVTNGSLGFSPGEMTKTISIAILDDPTPELAEE FSISLANPSTNAVLVEPVTTVVAILPNDDQHGVLSLSSENSGSSPKAVINEDTTFSTSSFTVVREGGTFG EVSIDYIITRNDSSSAPIVADLAPASGTVTLPEGQRSQSIPINIIDDPVPEEAEQFIISLLPDSVTGGAS VGAVTEGLLTIQDSDDAYGVIQFSSDVEQRIVSSTRPRQLQLMLTRAAGVVGQVSVSFSVVYRLPTQDPS SVGSTDVIDGAENQTTVIPGGSTVHPFQIPIKADSFLSLGATFLVTLLSVRLLDHATLLPPSSPRLGDRT AVSLEVTSGVANGEIGFERPNQRLFVNEPDGTTPTLFPLDITREGTSGDATIYWRIVSSPSYPVTPTQED ISAFSGSVFIASGIARTQIVLEILPDDLAETDETMIIQLYNVQPGSQILRQGDTEAVVTIRENDGPGGYF EFSPLTPGPFVISEGGDLVQVTILRRGGSLVTRSVRYFAAGDSMTSPEFYGLPQVVTFNPGETEKNISFV AAPDSIPELNEMFQLTLATFGNPPSDLGDLTTIQVTVLENDDPHGVFTFPEDPTIRHIDESKGTDIYSAR FPVLRDAGVFGQANVSWAVITTGAALDISPLSGVLTYGDGISLQEIEITARADEIPENPETFQLTLTNPA GASRLGSVTTATLNINKNDDAIFFEDPIAKTVAEPGAVAFTVRRNGTAASIASVDYRTVAGSATDGLFDY ATVAGTLQFGVGVQTQRVAVRILDDNTPEDDEYFTIQLYNPMGDVVVYGAPTATVTIAANDDPYGIFSFR EPLTRVFASEGTSVFTEIQRARGNFGTVRVHWQIVYNGTSEPVPAGTEFEVVAGTVEFTDQQSLQRIQVT SRMDGVPEFAEYYELVLVNVTDGALSDTDPISVSLEISANDDPYGVLVFPSSSTERDIAEDYYPEDNATG RAVFTVERAQGSFGEVEVLWEVFSDSISGILPTVRDLIFLSEPNPSVSPQPSSGRLHTGTQAMFFDGGTN SYLRVPSQYQLPTADIVSGFSLSAWVRPDADVDGFVLSKLSTDGITVHYGLKLAARPGGMIMVHYRYSGS SFTNTVIDFALSSVDLADGLWHSIILTIDSLKATLYVDGSLIAERTMDQAQGDGAGELYVGALQPGTERY KGLLQDVRMYARKLQEREIVEIWTSPSKQDLTPISGKLTFDPGQRSADITMESLDDTEEEGNEVFTVMLL CSSGGGRIGRDDATALLTVLKSDNANGLFGFDGPCTPTSFDPESNEALQYTCSVIRSRGDEGVVTIPWEV RNLVTDEVASDDFVNATGGVVFPNGVRTQTIALAAIDDMQPELLETFSIILLPQLPLSDDGLIGTTDTSG ASIDPDASANNLTIQANDFPYGLLQFATGPPPGTADPLIPPAAEMVRVRVREEEGMVRLLVVRAQGLLGE VQVEWRTIDGSALSAGKDPVDFVSGGGTLTFADQQRFLYITIAINDNNIAELDKTFQVQLSSPTQGAEVG IGSTVEVTIEGSDNAYGTFQFADVSLVVTVTEMDVGSSVTTLQVLRLGGALAEVTVDWVVTSDPNDPDAN VTNDLVQSRGSVMFGVDEMTADINLEIASDELPELDESFYVQLRNASDGRLGDPSKLVATVTVAANDDPY GAFIFEANSRSVVVGEEFRNVSLTIQRQFGSEGVVQVVYSTLNAEETIPNMPAYISRARENVDFIPTRSS VIFSPGQLSSDVSVVLLDDTEPETAESLFVYIVSVSLLSSPQANPVIDSPRVGAEHIAEVYIQANDDANG VLQLSASTVRVSEESMQPFLNVTRVAGSFGTVTVTFQHIPGTAQQGLDYSVTSTNVIMYDGETHKAIPIE ILNDRVPEVAESFQVVLLDQITGGAILGSPATCEVTIEPSDDPYGSFGFGFTNVQANEPEEGNSRQLSLS VIRNGGDIGVVAVIWEARINGVLAMDDVFPTGGTLYFLSFDVSQSFTLDILPDDIPEERETVILTLVNAT GGGVIGNPPTATISIEANDNPHGIVEFTLANNIVQEVEGGDTVASIMVTRSAGTFGDLQVTFDTRPLDLV QEVTQNGETAMDYYQLPITGSQMGVSMTTIDVTGQSNPLLACAQECLRERACGSFTYRIFSGDAMCLWTV STATDNVDATSGFRLFVKDLVKAQALYDSQAVPGLDYIPINSGSVRIPDGMASGYLNVTIRDDATPERDE IFNMRLASVTLVGPTPQPNNLPTLGTQRETRVTIASNDDANGVWRIYSNSPEAVNGQLVLVTETEGVSVS VELVVERQGGSIGDVSVSWQAVAGTATEGDDYSASGGTLNFASGQTRQVINIGIRDDMIPEIDETFSVEL YNPTGGSELGLNGRVDVRILANDYVAGILKLSTLSYIVREGEGFNVTVERSSPGLGQVTVDWTISGVNGQ VPTQSFQQTNGSLAFAPGQLLEAILLSVLSDDTPEVNEEFQVTLSNVQTMGISLTGAATLDPQGSTASVT IQASDEPHGVFSFAQGSEVVMVAEGNTTVQLFVDRKFGSIGRVRVFYEAKEGSLDPSLPALNLAQDGLDF IGGPNYLDFEEGQSVGEITVPINEDDIPELNEVFLVNLTAVQILDPATDTPPRLDSSGTLSQVTIEANDG TQGVVLFSGITGSLDTIEAERTLQLTVSRDRGTYGAVTVFVYSQPVDARKGSDYSFSDQVLSFGDGETTR TINVAIFDDDIAEADETFELILNNPTGGLQLGDPAKVTIRILASDDAFGIINFASPLTVTIQEPSDTDTS NSVAQLTLVRSRGTFGDVQVPFAVVDHSGSRGVIDLTPVDGFVTIAAGESTGVLHISATADDIPELEERF QVLLATPQGGAMLGDSNNATIIIQRNDAPYGSMQVFPTGSRQASLDVEEENGTVYFTVERSGGHIGTITV DWQAVPDTATAQAGEVLALATVQRIASQAIRSWCSYSVGQDVYLVLVSGAETGQLSSQIGSDGSSPGATS LLYRWQGEFVPVQSIETDGGVACTSYDIQGTTYLVIANHGSTGRYETMSRIYRVNQDGTLYVMQDVATKG ATDATFFTIGSDVFLMLANGLTNAQLTVTESTVLLWTGVQFVAVSSLATTGAAGVEALSINGDQYLAVAN SYDSGQASYEIKSVVYKWESGSFTEYQQLDTLGAVDVESFSVGTAMYLVFANSQNNEGASNVDSYVYRWN PSTSLFVIHQTIPTQGAQSVTTFLTSSGTTYLAIANAAGDSVVMEWEPFSAMFMDSLSLAPAYDVVPFTV TDYAGRDLVMLASANFGDGVSVLDSMILQIAGVTESSDFIPRSGRLTFQPEDTELTVAITILDDDRPEDD EYFRVVLSNPTGGAELGRQDAVMVDILSNDDAHGIIGFAQDSLNIQATEQATDTAVIFTLERQRGTSGVV VVAWVASGEHDPSDMRPTAGMVEFADGVSTAAIVITVTADSFPELDETSTIQLTSIVNPGTTHPGRGAMI SDTDSTALLTVLANDSPHGVFAWTLNSLFSVVNEPEGSQPSASVVLHILREQGSLGAVNVRYKTSRAAEM PELKQAEPNRDFVSQDNYVRMEDGVTSASLTIAILPDTDSEGPETFLVNLTSVDLVTGTPVGGAAPSIKN DQDVAEITITQNDNANGILQLNASKNSAGDVEVYEGSGTSGVLSLPVSRTAGAFGRVGVNWLATTVSAST ADFSPLSGNVTFIEGQREAFIEIAIIDDTIYENDERFTVSLHNPSGGAVLGAETSVIIKILKNDSPKGLF GFLYTQETVMESLSPSDPSGEVTLIIERSQGTQGIVEVDWALEPLGRMDLSPAQGSLTFQEGATRRTITL RAVEDTVLEGEERYTVTIQSVTDDAEISPVFGTTTIVIQPDAGSAGLIAVLPQSRYVLIGEPTTTHDGTA TLHLTRGAGIFSQVTVNWQLSPRDGSTFRQTSGTLVFEDLQQNATIMLQTIDDSIPETKQTYILQLSSIT GGAAIDPDSQANQATIIVVASDNPHGVFEFSGLPEVVVSEDLPQVSLDVVRNAGISGAVKVTYTTKQISA QPGEDYVEDSGDLIFSEGVDVNTIKISLVPDNLPEGPESFLVNLTSIELLQPVNNDYTLRGGLSLDMPPV IGSFSEKTVTIAANDNAQGIIEFAQSNVFEFSEGVGTAVIPVVRTAGTFGLVQVSYTSRNLTATPGGVDY SLTDGAVSFLDGQSQGSISVTIIDDQLKEFAEVFEITLTETLGGAVLGRNRTATVVISKSDGPDGLIGFS LNQLERILPNPENNRDMEFTIELSGGIDQYLTGAEVRWRILGPNSQTLPPDTSDISTSGGQLQGSVTFDP GQRGAKSFTLRVKPYPGPEVEETFTVEIYQVVGAGEISEDAGRATLKILKHGDPNGVVRFYGESINPRSF EEPGDGGSLKVAFPLRRREGVVGDINVHWEARDATGQVASDVSPPNGTLRIPDGVANTQILLNILPDQIP ELQERFQLVLVSVDGGAEIDPQFNTSTFYIQPNDNPHGVFSVHQENQTVGVNANMKRYLRIYVTRGAGTE GDVSVTFDLKYNDGITGAYVPSSSSVVCRSGNAFCTKDIPLLNNDMFLERDTSFNVTLTSLSYLGPVEVT IPPVMLPGAKSALVVVPQEAANSLVGFKMDATTVDDISYRTVLTIERIGSYGTIDVLWQAGYPSDELPQG YLQGAVSQGSGQLNMGSGVSTITLPIVLNPSGNPSELFAAHLTSALTSAEGGARLRGGYTTAPIEPYGVV GFTQGSRGVTVSEGSGELSLTVERQLGTLGSIRVTYQTHAASAVAGEDYVAITSGALTMATRAKTANILV TILEEQAPELAKVFYVNITSVARLPIDGTQGTSPRLSSRYPVSEVTIEGSNDPYGVLSMDPDVIEIAESE ATCKHVTLNIQRSGGSHGEVSIRVRTIGGGEPWQSSVAQRPSDTTNTIENALANTQDRPHATAGQDYEQV DVAITFRDGETEKSFQVEVCDDGVAEPAELFFVYLSEPTGGARVAQGQPDGGLKGFTHFTIVGSDNFNGV IGFAEESRFVTVDEDVTPSITLTLDRGQAFFGEVTVEWRATYSAIGDITNDADLYNQLEQAQGMVTCPAD QRLCTFDITLRQDEEPEFASWFLVELVGVGQGASLDQAQRLANITTLDSDYPYGLLQFTTDTRFQSVHSN TKRVSLRVERIGGSTKDSAVSWGTFQLDSPIKLAGLTAYPAIPDTDYVATSGVLDFSSGIRRIPLDVVLL PETPASSAEYPKLLQVRLMQATNGAGIHADYGTASITLVEDERTADIWDNRYSALIGLNNDNIYNILLDM AEHVKAQLTEEQLAVVVDTIGMVVAEGGRRKLPSNLLTQLMDIYCTLMNPDRQDTRGAYQLAESFSTFAF ILVTDLPCETQDPQTLSCDHAVVETGRWSRGRINGHNFQGKDRNSFTMPTNLLDTSASSSCEDIHFIEYS SQQWFYGANEASTLNNQVLSVAIKGAEQNFTRLSTPVTYRIYTDNARVTPRGASCVIFNGPTERWRPDSC QILTQQGAYVECSCTHLSDYAAQGETDNLVGYNVYIYVSCFICIAGLVCAIIAHNVCSVYSMFSAKLLIH MCFAAMSLQVVFVTSAYVSSYISTASCAVLGVLIHFFFLAQFTWMLVQAFNLWKVFVINDEHTERYYILF FVIGWCLPVVAIVIYVVITYAVFDWPFLLDTSIADPSSPAAMYGDVHLNGDICFMPNGYAALASAVGPAI LCLFGVATVFTNAYQVKPQWKRYDDIYMGSYNTTEVQLLLVFWAIIFLTCLFGGLHMAYSYLWLLIVFVI FNIVQGLYAFVVYTILRNQICRPRKGNYSLNPSGFDNSVMLLDNSQYVGNGLMAAGSEKGSRVLLTKAEQ PPGVTIIGNHDEWDTQSLGRQSQHSQHSHHSQHSKTNQSQPSRPGSVASRGGGGGNRSRPGSIQNNLYAP APFQDVPAPLPPTHHHDDDTDSQDFDDLIFALKTGGAYVRGEEEGESRSRPSSRVSSNWQDDSQMGEMMD MTGDATQDHYEMRRIQIADTHL
???blast.query.upload???
???blast.options???
???blast.eval???
???blast.eval.01???
???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
???blast.wordsize.4???
???blast.wordsize.5???
???blast.wordsize.6???
???blast.wordsize.7???
???blast.wordsize.8???
???blast.wordsize.9???
???blast.wordsize.10???
???blast.wordsize.11???
???blast.wordsize.12???
???blast.wordsize.13???
???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds