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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_038216601.1 PREDICTED: Patiria miniata ribosome-binding protein 1-like (LOC119741028), transcript variant X2, mRNA CTGACCAATCACAGTACGTATTTCCCGCTCATGCATATCGTATGTAGGCGTGTAATTTTCCTTTAGGTTG CCGTCGTTGGAATTTGGATTGTGAAAAGATCGTCAAAAACACTTAAGTCTCTGGTTTGTGAGATTAAGTG GTGAAGTCCAGATCAACCATGATTGCTGTGGATTTGTATGAGCCCCAGGTCTTAGCCCTGGTGGTGTTTG CTAGTTTCATCGGCTTGTCTGCCTTAGTGTATATCATCTCCATCTTCACCATGAAGGAGAAGACATATGA GGAGGCCATTGCAGAGCAGCGAGCTCGCCTTGACAAGGAGCAGCAGCAACATCGAGATCAGCGGCAGAAA CGTCGTCAAGCCTTTCCTCGTAAGAAGAAAGATAAAGTGAATGACATTGACCAACCATCACCTCCCCCAT CACCTCCATCACCACCCGTGGAGGAGGAAATCAAGCCGATAGTTGAGCAACCAATCGCTGCTGCTCCCCC TCCTGCTCCTCAACCTAAGACCAAATCTCCTAAGCAAGGGAAACAACCCAAAGTACCACAGCAGCAGCAG CAGCAAGAGCAACAACAGCAGCAGCAACAAAAGCAGCAACCGCCCAAGGCGAAAGAAGCTGCTAAAGAAA CCTCAGCTCCTTCCAAGGAAGCACCTTCCAAGAAGACCCCCAAAGAGGCTCCTGTGAAAGAAGCACCCAT CCAGAAGGCTGCGTCAGCAACTACCAAATCTGCTCCTCCTCCAGCCAAGACCCAGACCTCTCCCAAACCA ACCCAGAAGTCTAGCCAGAAGCCCCAGAAACAGAAGCCAGTTGAGGAGAAACTGCAGAAGAAAGAAGCCC CAATAGTGGCCCAGAAGGCTCCAGAGGCCCAAGCTGCACCCCAACAACCCAAGAAGGAGGCTGGTGCTAC CCAGAGTTCCCCAGTGAAGAGCAAGAAAGGGGCCAAGGCTGGGGCACCATCGGGGGAGAAAGCAGCAGGA CCAGCAGGGGATACAGCTGTGGACACTGGAGCCCTGAAGGCCAAGAATCTTAGCGCCATGCTCAAGACAG CAACTCTGTCCAATAAGGAAGTTCAGCAACTTGTGGAAGTGTTGCTCAACAAGAATGGTGGATCCGCTGC AACATCGGAAAACTGGGTCAAGGCCAACCAACGTGATCCAGTCCAAGCCATGAAAAAACAACTGCAGGAG AAGGAACAAGCCTTGCACAATGAGATGCTGCTAGCCCAGTCCTCATCTCAGAAGGTGAAGGAACTACGCG CTGAACTGACCCAAGAAAAAAGCCGAAGGATCCAAGTAGAGTCTCGCTACAAAGAGACGGTGCATAACCA TAGCCGTGAATGTGATGCACTCAGAGCTAGAATGCAACAGAACCATGATGCTCATACCCGTGACACCCAG AATCTTCAGGCTCACATCAAGCAAGTAGAAGCCAGGAATGATAACACAGGGGTAGAGGCATTGAATCAAC TCCGTGATGAGAACACTCAACTCAAGGCAGAAGCAGGACGAAATGCACAACACTTCCAGAATGAAATCCA GAAGATAAAGAACCAAATGTCCGCCAATGAGGGTCGCGTCAGACAGGGTGATGATCAACGACGTAGCCTG GAATCCAAACTCACTCAGTATGAACAGCGGATCAAGGTGTATGAAGCAGGCCAGGCTGGACAGCGTGAGA ATGAAACAGCTCTCTCCAAACGTCTTAGCGAGGTCTCTGAGGAGCTACGTAAGGCAGAAGCTCGTCTCCA GACATCATCCAGAGAGGGAGAGAAGACGTTGGAACGTCTGCAAGCTTTGATGAAGGAGAACGATACTGTC AAGAAACAACTGCAGGAGGTGTATCGTCTGGATAGTGAGAAAAGTACACAGATGTCAGCTATGGAAACCA GACTCAGGGATCATGAGAAGCAAAAGATGAACCTTGAGGGCGCTGTTAATGATTCCAAGGCCAAGTTGTC TGAGCAGGAGAGAGCATGCACCCAGAAGGATAAGGAAATGACGAACCTAAGAGATGCCAAGGCCTCACTG GAGACTCAGCTTCAAACCAAGATGAAGGAACTAGCTCAGGCAGCTGAGGCCATGAAACCCAACGGTGACA TGGGTAGTGATGAACCTAAGGAAGATGTCGTCTTGAAGAAGGAGCATGAAAACATCATGAATGAGAAAGA AAAGGCCTTGGCTTCGCTACAGGGTGAAATCTCATCCAGAGACGAGGAATTGGAGACACTCAAGCAACAA TTAGAGCAGCAGAAACAACGAAATAATAAACTTCAGGAGAAAAATTGGAAGGCCATGGAAGCCCTCACGG CGGCCGAAAAAACAAGCCAGGACAAAGTGGCCCAGGCGTTGGAGAAAGAGAAGAGTCTTCAAGAAGTTGC TCTTTGGAGCCTCGAGGAGGAGCTGGATGCTAGTTTATACAAGGAGAAGGAATCATCCAAGGGTTTGCTG ATGAGGATATTCCCAGACATTAACGTGGATTCTAGTCTTGGCTATGAAGACTGGCTGTCCACATTTGAGA AGAATGCCTTGAATTATCTTGCCGTACAAAAAGCTTCCTCAGGACTAGAGGTCGCTGAGTTGTCTTCCAC CATGTCCAGTTTGGAAGAAGAAAAGAAACAGTTAGCCAACCAATGTCAACATTACAAGTCTGTGCTCAGT GATACGGAAGGAATCTTAAATAAACTGCAAAGCAGCGTAGAATCTGAGGAGAAGAAATGGCAGGATAAGA TGTCAATAAAGGACACAGCCTTGGCACAGGCTAAAAAAGAGATGGCATCACTACAGGACCAAACAAAGCA GTTAGACCAACTCAAACAGGCATCTGAGGACAATAAGAGATTGACCAATGAGCTAGGAGCAGCTCGGACC AGCCTGAGTCAGATGGAGAAGGAACGTTCGGCCTCAGCAGCTGAGTATGAGTCTACTTGCCGTGAGTTGA AGGATGTCCAGAATCAACTCCGACAATTGATGGAGGAATTGAATACAGCCAATCAGAGGGCAGAGAATAG CGTAGATGTTGCAGAAATGCAGAAGGTGAAAGCCACCTTAGCCGCTGAACAAGAAAAGAGTCAGAAACTA TCGGCTGATCTCGAGGAGGCTAACCGCACCAAGGACCAACTCCGCAAAGCTTCCACTTCCAGCCAGGACA TCTTACAGCAAGAACTGCAGACACAACGTTCCTCCTCCCAACAACTCAAGACAGAACTAGCCAGTACCAA GCAGGATCTAGAATCAGCCTCCCAGAAGCTAGCCCAGTCTTCAGCCCAGCTCCAGACCTCCCAGCAGGGA CTAGTTCAGTCTCGGTCTGAGATGGAAGAGCTCAAGCGAAGCAACTCCAGGCTTGAGGAAAACGCAGAAG CTGCTGCTAAGGCAAAGCAAGAGACTGAGCAGAGCCTGGCTGCTCTCAAAAACGACCTGGTGGCCGCAAT GAGAGGGAAACAGGAAACTGAGCAGAACCTTGCATCTCTGAGAGAGGAGCTGGATGCTGCCACAAAGAAG AAAGAAGAAAATGAACAGAGTCTTGCATCTCTGAGAGAGGAGCTGGATGCTACCACAAAGAAGAAAGAAG AAAATGAACAGAGTCTTGCATCTCTGAGAGAGGAGCTGGATGCTGCCACAAAGAAGAAAGAAGAAAATGA ACAGAGCCTTGCATCTCTGAGAGAGGAGCTGGATGCTGCCACAAAGAAGAAAGAAGAAAATGAACAGAGT CTTGCATCTCTGAGAGAGGAGCTGGATGCTGCCACAAAGAAGAAAGAAGAAAATGAACAGAGTCTTGCGT CTCTGAGAGAGGAGCGGGATGATGCCACAAAGAAGAAAGAAGAAACTGAAGAGAGTCTTGCTACTCTGAG AGAGGAACTAGAGGCATCCAAGATGGCCCCACAGGAAGCCTCAGAGGCTTCCAAGAGACTCCAAGAGAGT GAAGAATCCACCAAGACTCTCCAGAAAGAGATTAACACCTTAAAAGAAAGCCTCCAGAAGGAGAAAGGAT TAACCAAGGACCTAGGCACAGCAGCAGCCAAACTGCAGGCTATGCTCAAGAAGACACAGACTGTATTGGC TGCAGAGAAACAGACCGTTGCTGAACTCAAAGCTAAAGCTGGCATAACACCGGAGGCAGAGATAAATAGC TCGCTGACCGACAGTCAAGTTGAACTTCAACTCTTAGATGCTGCTGATGATGAGGAGGGTGCCAGTGCCA AACCTGCTGTTAAACCCGCAGACCCAACCGATGGTTCATCAGTGTAGCATCAGGCAACAACGTGACATCA TCACAAGGCCTTCCATTAAAATGTAACCAAAAAAATAATAATATCCCTGCATGCGTTGCAGATGCTCAGA GGGCGTTCTTTGTTATTGTAATCTTGTAACAATGAATGCAGGAATTATTCATTCATGCGTATGGAACAAT ACAAAACCACGGCCCTCTAACTCCACCTCAACGCATCAGCTCCATTGTTGTACATGTATTTTAATTATTT TGTTGGGCTAGTCAAAGTAGATAGTTGTGTAGCTTACAAATACGTGCATGGTAAGATGGTGTCCCATGTT TACATCTAAAGCGCCCTCTAGTGATATGGAGACAGGTCAGGCAGACAACTTAAATAAGCCAATTGAGATT TGTTGTCTAACAGTCAAATTATTACACAAAACTTAAATCTTCTAAGTGCTTAAATTACCTGTAAATATTT AAAATACAAATACTGCTCAATTTTAGCTAACAATTCAATTAATCCGCCCAATAGTTTTAACAACTGTAGT TCTTTCGTAGAATTCCATTCCAACATCGAATGAGGGCGCTGTTGATGTAGTAAAAAAAAAAAAAAGTAGG TCGGGGGTGGGCATACAGAGTTTTATTTGTAAAGATGTAAAGCAAGCTGCATTAAACTTAATCCTAAGAG ATCTCAAGCCAGAGATGTGATATTTAAAATTGGGCAAAACAAATAAATTTCTCCTGTCGACTATTGATAG TTAATTGTATTTTTCCTTGTCATGTAAACATTTGATTGATTTTTGATTTACTGGAACAGACAAATGAAAT GAAAGTTCATCGTGTCGGTATGAAGTGAAAGGCTTAGATTGTTTGCCAGAAAATGGCTGTGGGTTATTTG ACTTTTTTTTGAGGACAGAATAAAGTGGTAAGGCATTTGATTCAAAAAAGTATAAATAATAAATTGCAGC ATCAATTGTAGAAAAATTATTTAGTCCAATGTGTGTGCAAGGTTTATTTACCGTGGTAAATTATGCAATT GGATTTTATTTCATAGCTATAGTGCCTCTCTGCCTATTCCATTATACACAGATTCACCTTTTTTTCTTTT GCTTCAAAGTAAATACTTGACATTGCATTAAGAATGACATTGCTGACCCCAATTTAGATTCTGACATGTC ATTGATTGCTGCATGTATAAGCATACTTGTATACAGGTGAATACATACAGATGATTGCATTATCCAGGGT GTACTTCTTATGTAATTTCCAAAGACAGGAATCAGTGAAGCACCTATATTTAGGACGAGGAAGATATTCT GGATAATCTGATATTTTTAGTAGTCCGTTGAGATTGATAATTAAAAGAAATGGCCAATGTTCACCAACTA CTCATTTTCAACAGATCGACAAATCTGAAATATTTCAAAACTTGAGAAGTTGTATCCTCTCGTTCTCTGA AGCTGATCAACATCTTTTTGGTTTTCCTTTTTTTTTCCTAGGCTGAGTACTTAATACTTTGAGTTGTTTT TTCCTTGAATGGGTACCTGTCAAACTTCAATTCTTGTGGTTTATATGTACGTGTCTCGTTCAAGTAAAGC TTAACTAAATTGCTCCAACATGCGTAGGGAGTTGCAGTATTTGTTATTGTAATATCAGCACTGCAATGTA AGCTCAATACCAGCTCTGAATTTGACATCAATGATGTTTGTATAAATGCTCATTTATTAATCAACATTCC AGTCTAACGAAAAATGGATCGACTTATTAATCAAATGTTTCCAATCTGTTGTTGCTCAGTGGATCTAAAA CATTAACAAGATTAGGTTGCGGGCTTATAATTTAAGGAATTGTTACAATTTTAGTCCCCCAAAATTCCCT TTTTGGGGGGGGGGGATTTTGTTAATTTACTTTTTTAACTGCATTTAGTAATCAAAGTGGTTAACTATTT TTCTCACCAAAACAAGAAAAGAAATATTACAGAATTTGCCTTTTGTGTTCATTTAGTTACATGTAAGTCA GTAGTTTTTCCCATCTTCTTTATGTCTGTTTGCTTTCTTTTCCTTCTGCATATATGCTTACATAATATTA AAATAATATGTTTAAGCTGATTAACCTGGGTCCAGAATAATATAAAAGGGGGATGTTTTGTCATTATTGT AATCAGTTATAAATTTGAGTAATCATTTATAAAAAACAGGGTAATGGCATACAAAAGTGGTGGTGTTATT TCTTTATTCTTATTTCTGTGATTAACTGACATTTAATAATATGATGTGTAATCTGCAATGTATTTACAGA TAAATACATACAGTGGAATTCAGGTTTATGCAGGAATTTACAACGTAAGATCTACTAACTTGCTTTGAAT GGTGTCCAGCTGAGATCATCTGTGTTAAATCTAGCAGTTATGTGGGCATAAAACGTCTTGACAGTATTGA ATGTCAAACTTTATTGCCAGATGTAGGAAAATGAACACATTTGAAGTACTGACGCTGGATTCTTAACTTG GTTTTTGTGAAACGATTCTGGGTTTTTTCTCCATTTGTCACATGGAAATTTATCTTGTAACATTGCTATC AATTTTGTGCTCTGCTGCTGTGAAAAAGGAATGGGGGAGATTCGTTTTTGCTAATGCATATTGGTTCAGA AACGCAACATTTATGTACTGTGTGCCCGATATCTCGACTACCCTTGTATGTCATCAGCGGAGACATTGGA AGTAAAGTAAAACACAGGGCATTCGGTCCTCAAGAAATTCAATATGTCAAAACTGATTTTGGGCGATACC ACCATGTACCATAACAAGTTTTTGTGATGTATTGTCAAAAGGTTTGTATTTTTCCATTGGTCCATGTCCA CTAGCCTTAGATTATCCCGCGAAACAAATTGACTGCATGTACATGTACCAATGGTTTCCTTAAAGCAACT CGGCAAAGTTTAAAGCCTACATTTAAAGACCAAGTGAATAATGATAAAATAAATTTAAAAATTAAAGACG TTTGTTCTTTGGTGGTTGCAGTGACAAGAGGTAAGGAACATGATGTTTGAGACCAACTACATACCGTAAT TTATGTTCTCAGTATCGTCAATTCCCTATTCACATGTCGTTGGATGTTCATTCTAACAACTGTCAATTAT CGGCATATTATGTAATGGTGAATTAAAGTTGTCACGACCAACTGATAAGACGA
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???blast.eval.1???
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???blast.numalign.1???
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???blast.numalign.100???
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???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds