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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_038216605.1 PREDICTED: Patiria miniata ribosome-binding protein 1-like (LOC119741028), transcript variant X6, mRNA CTGACCAATCACAGTACGTATTTCCCGCTCATGCATATCGTATGTAGGCGTGTAATTTTCCTTTAGGTTG CCGTCGTTGGAATTTGGATTGTGAAAAGATCGTCAAAAACACTTAAGTCTCTGGTTTGTGAGATTAAGTG GTGAAGTCCAGATCAACCATGATTGCTGTGGATTTGTATGAGCCCCAGGTCTTAGCCCTGGTGGTGTTTG CTAGTTTCATCGGCTTGTCTGCCTTAGTGTATATCATCTCCATCTTCACCATGAAGGAGAAGACATATGA GGAGGCCATTGCAGAGCAGCGAGCTCGCCTTGACAAGGAGCAGCAGCAACATCGAGATCAGCGGCAGAAA CGTCGTCAAGCCTTTCCTCGTAAGAAGAAAGATAAAGTGAATGACATTGACCAACCATCACCTCCCCCAT CACCTCCATCACCACCCGTGGAGGAGGAAATCAAGCCGATAGTTGAGCAACCAATCGCTGCTGCTCCCCC TCCTGCTCCTCAACCTAAGACCAAATCTCCTAAGCAAGGGAAACAACCCAAAGTACCACAGCAGCAGCAG CAGCAAGAGCAACAACAGCAGCAGCAACAAAAGCAGCAACCGCCCAAGGCGAAAGAAGCTGCTAAAGAAA CCTCAGCTCCTTCCAAGGAAGCACCTTCCAAGAAGACCCCCAAAGAGGCTCCTGTGAAAGAAGCACCCAT CCAGAAGGCTGCGTCAGCAACTACCAAATCTGCTCCTCCTCCAGCCAAGACCCAGACCTCTCCCAAACCA ACCCAGAAGTCTAGCCAGAAGCCCCAGAAACAGAAGCCAGTTGAGGAGAAACTGCAGAAGAAAGAAGCCC CAATAGTGGCCCAGAAGGCTCCAGAGGCCCAAGCTGCACCCCAACAACCCAAGAAGGAGGCTGGTGCTAC CCAGAGTTCCCCAGTGAAGAGCAAGAAAGGGGCCAAGGCTGGGGCACCATCGGGGGAGAAAGCAGCAGGA CCAGCAGGGGATACAGCTGTGGACACTGGAGCCCTGAAGGCCAAGAATCTTAGCGCCATGCTCAAGACAG CAACTCTGTCCAATAAGGAAGTTCAGCAACTTGTGGAAGTGTTGCTCAACAAGAATGGTGGATCCGCTGC AACATCGGAAAACTGGGTCAAGGCCAACCAACGTGATCCAGTCCAAGCCATGAAAAAACAACTGCAGGAG AAGGAACAAGCCTTGCACAATGAGATGCTGCTAGCCCAGTCCTCATCTCAGAAGGTGAAGGAACTACGCG CTGAACTGACCCAAGAAAAAAGCCGAAGGATCCAAGTAGAGTCTCGCTACAAAGAGACGGTGCATAACCA TAGCCGTGAATGTGATGCACTCAGAGCTAGAATGCAACAGAACCATGATGCTCATACCCGTGACACCCAG AATCTTCAGGCTCACATCAAGCAAGTAGAAGCCAGGAATGATAACACAGGGGTAGAGGCATTGAATCAAC TCCGTGATGAGAACACTCAACTCAAGGCAGAAGCAGGACGAAATGCACAACACTTCCAGAATGAAATCCA GAAGATAAAGAACCAAATGTCCGCCAATGAGGGTCGCGTCAGACAGGGTGATGATCAACGACGTAGCCTG GAATCCAAACTCACTCAGTATGAACAGCGGATCAAGGTGTATGAAGCAGGCCAGGCTGGACAGCGTGAGA ATGAAACAGCTCTCTCCAAACGTCTTAGCGAGGTCTCTGAGGAGCTACGTAAGGCAGAAGCTCGTCTCCA GACATCATCCAGAGAGGGAGAGAAGACGTTGGAACGTCTGCAAGCTTTGATGAAGGAGAACGATACTGTC AAGAAACAACTGCAGGAGGTGTATCGTCTGGATAGTGAGAAAAGTACACAGATGTCAGCTATGGAAACCA GACTCAGGGATCATGAGAAGCAAAAGATGAACCTTGAGGGCGCTGTTAATGATTCCAAGGCCAAGTTGTC TGAGCAGGAGAGAGCATGCACCCAGAAGGATAAGGAAATGACGAACCTAAGAGATGCCAAGGCCTCACTG GAGACTCAGCTTCAAACCAAGATGAAGGAACTAGCTCAGGCAGCTGAGGCCATGAAACCCAACGGTGACA TGGGTAGTGATGAACCTAAGGAAGATGTCGTCTTGAAGAAGGAGCATGAAAACATCATGAATGAGAAAGA AAAGGCCTTGGCTTCGCTACAGGGTGAAATCTCATCCAGAGACGAGGAATTGGAGACACTCAAGCAACAA TTAGAGCAGCAGAAACAACGAAATAATAAACTTCAGGAGAAAAATTGGAAGGCCATGGAAGCCCTCACGG CGGCCGAAAAAACAAGCCAGGACAAAGTGGCCCAGGCGTTGGAGAAAGAGAAGGAGGAGCTGGATGCTAG TTTATACAAGGAGAAGGAATCATCCAAGGGTTTGCTGATGAGGATATTCCCAGACATTAACGTGGATTCT AGTCTTGGCTATGAAGACTGGCTGTCCACATTTGAGAAGAATGCCTTGAATTATCTTGCCGTACAAAAAG CTTCCTCAGGACTAGAGGTCGCTGAGTTGTCTTCCACCATGTCCAGTTTGGAAGAAGAAAAGAAACAGTT AGCCAACCAATGTCAACATTACAAGTCTGTGCTCAGTGATACGGAAGGAATCTTAAATAAACTGCAAAGC AGCGTAGAATCTGAGGAGAAGAAATGGCAGGATAAGATGTCAATAAAGGACACAGCCTTGGCACAGGCTA AAAAAGAGATGGCATCACTACAGGACCAAACAAAGCAGTTAGACCAACTCAAACAGGCATCTGAGGACAA TAAGAGATTGACCAATGAGCTAGGAGCAGCTCGGACCAGCCTGAGTCAGATGGAGAAGGAACGTTCGGCC TCAGCAGCTGAGTATGAGTCTACTTGCCGTGAGTTGAAGGATGTCCAGAATCAACTCCGACAATTGATGG AGGAATTGAATACAGCCAATCAGAGGGCAGAGAATAGCGTAGATGTTGCAGAAATGCAGAAGGTGAAAGC CACCTTAGCCGCTGAACAAGAAAAGAGTCAGAAACTATCGGCTGATCTCGAGGAGGCTAACCGCACCAAG GACCAACTCCGCAAAGCTTCCACTTCCAGCCAGGACATCTTACAGCAAGAACTGCAGACACAACGTTCCT CCTCCCAACAACTCAAGACAGAACTAGCCAGTACCAAGCAGGATCTAGAATCAGCCTCCCAGAAGCTAGC CCAGTCTTCAGCCCAGCTCCAGACCTCCCAGCAGGGACTAGTTCAGTCTCGGTCTGAGATGGAAGAGCTC AAGCGAAGCAACTCCAGGCTTGAGGAAAACGCAGAAGCTGCTGCTAAGGCAAAGCAAGAGACTGAGCAGA GCCTGGCTGCTCTCAAAAACGACCTGGTGGCCGCAATGAGAGGGAAACAGGAAACTGAGCAGAACCTTGC ATCTCTGAGAGAGGAGCTGGATGCTGCCACAAAGAAGAAAGAAGAAAATGAACAGAGTCTTGCATCTCTG AGAGAGGAGCTGGATGCTACCACAAAGAAGAAAGAAGAAAATGAACAGAGTCTTGCATCTCTGAGAGAGG AGCTGGATGCTGCCACAAAGAAGAAAGAAGAAAATGAACAGAGCCTTGCATCTCTGAGAGAGGAGCTGGA TGCTGCCACAAAGAAGAAAGAAGAAAATGAACAGAGTCTTGCATCTCTGAGAGAGGAGCTGGATGCTGCC ACAAAGAAGAAAGAAGAAAATGAACAGAGTCTTGCGTCTCTGAGAGAGGAGCGGGATGATGCCACAAAGA AGAAAGAAGAAACTGAAGAGAGTCTTGCTACTCTGAGAGAGGAACTAGAGGCATCCAAGATGGCCCCACA GGAAGCCTCAGAGGCTTCCAAGAGACTCCAAGAGAGTGAAGAATCCACCAAGACTCTCCAGAAAGAGATT AACACCTTAAAAGAAAGCCTCCAGAAGGAGAAAGGATTAACCAAGGACCTAGGCACAGCAGCAGCCAAAC TGCAGGCTATGCTCAAGAAGACACAGACTGTATTGGCTGCAGAGAAACAGACCGTTGCTGAACTCAAAGC TAAAGCTGGCATAACACCGGAGCAGGCAGAGATAAATAGCTCGCTGACCGACAGTCAAGTTGAACTTCAA CTCTTAGATGCTGCTGATGATGAGGAGGGTGCCAGTGCCAAACCTGCTGTTAAACCCGCAGACCCAACCG ATGGTTCATCAGTGTAGCATCAGGCAACAACGTGACATCATCACAAGGCCTTCCATTAAAATGTAACCAA AAAAATAATAATATCCCTGCATGCGTTGCAGATGCTCAGAGGGCGTTCTTTGTTATTGTAATCTTGTAAC AATGAATGCAGGAATTATTCATTCATGCGTATGGAACAATACAAAACCACGGCCCTCTAACTCCACCTCA ACGCATCAGCTCCATTGTTGTACATGTATTTTAATTATTTTGTTGGGCTAGTCAAAGTAGATAGTTGTGT AGCTTACAAATACGTGCATGGTAAGATGGTGTCCCATGTTTACATCTAAAGCGCCCTCTAGTGATATGGA GACAGGTCAGGCAGACAACTTAAATAAGCCAATTGAGATTTGTTGTCTAACAGTCAAATTATTACACAAA ACTTAAATCTTCTAAGTGCTTAAATTACCTGTAAATATTTAAAATACAAATACTGCTCAATTTTAGCTAA CAATTCAATTAATCCGCCCAATAGTTTTAACAACTGTAGTTCTTTCGTAGAATTCCATTCCAACATCGAA TGAGGGCGCTGTTGATGTAGTAAAAAAAAAAAAAAGTAGGTCGGGGGTGGGCATACAGAGTTTTATTTGT AAAGATGTAAAGCAAGCTGCATTAAACTTAATCCTAAGAGATCTCAAGCCAGAGATGTGATATTTAAAAT TGGGCAAAACAAATAAATTTCTCCTGTCGACTATTGATAGTTAATTGTATTTTTCCTTGTCATGTAAACA TTTGATTGATTTTTGATTTACTGGAACAGACAAATGAAATGAAAGTTCATCGTGTCGGTATGAAGTGAAA GGCTTAGATTGTTTGCCAGAAAATGGCTGTGGGTTATTTGACTTTTTTTTGAGGACAGAATAAAGTGGTA AGGCATTTGATTCAAAAAAGTATAAATAATAAATTGCAGCATCAATTGTAGAAAAATTATTTAGTCCAAT GTGTGTGCAAGGTTTATTTACCGTGGTAAATTATGCAATTGGATTTTATTTCATAGCTATAGTGCCTCTC TGCCTATTCCATTATACACAGATTCACCTTTTTTTCTTTTGCTTCAAAGTAAATACTTGACATTGCATTA AGAATGACATTGCTGACCCCAATTTAGATTCTGACATGTCATTGATTGCTGCATGTATAAGCATACTTGT ATACAGGTGAATACATACAGATGATTGCATTATCCAGGGTGTACTTCTTATGTAATTTCCAAAGACAGGA ATCAGTGAAGCACCTATATTTAGGACGAGGAAGATATTCTGGATAATCTGATATTTTTAGTAGTCCGTTG AGATTGATAATTAAAAGAAATGGCCAATGTTCACCAACTACTCATTTTCAACAGATCGACAAATCTGAAA TATTTCAAAACTTGAGAAGTTGTATCCTCTCGTTCTCTGAAGCTGATCAACATCTTTTTGGTTTTCCTTT TTTTTTCCTAGGCTGAGTACTTAATACTTTGAGTTGTTTTTTCCTTGAATGGGTACCTGTCAAACTTCAA TTCTTGTGGTTTATATGTACGTGTCTCGTTCAAGTAAAGCTTAACTAAATTGCTCCAACATGCGTAGGGA GTTGCAGTATTTGTTATTGTAATATCAGCACTGCAATGTAAGCTCAATACCAGCTCTGAATTTGACATCA ATGATGTTTGTATAAATGCTCATTTATTAATCAACATTCCAGTCTAACGAAAAATGGATCGACTTATTAA TCAAATGTTTCCAATCTGTTGTTGCTCAGTGGATCTAAAACATTAACAAGATTAGGTTGCGGGCTTATAA TTTAAGGAATTGTTACAATTTTAGTCCCCCAAAATTCCCTTTTTGGGGGGGGGGGATTTTGTTAATTTAC TTTTTTAACTGCATTTAGTAATCAAAGTGGTTAACTATTTTTCTCACCAAAACAAGAAAAGAAATATTAC AGAATTTGCCTTTTGTGTTCATTTAGTTACATGTAAGTCAGTAGTTTTTCCCATCTTCTTTATGTCTGTT TGCTTTCTTTTCCTTCTGCATATATGCTTACATAATATTAAAATAATATGTTTAAGCTGATTAACCTGGG TCCAGAATAATATAAAAGGGGGATGTTTTGTCATTATTGTAATCAGTTATAAATTTGAGTAATCATTTAT AAAAAACAGGGTAATGGCATACAAAAGTGGTGGTGTTATTTCTTTATTCTTATTTCTGTGATTAACTGAC ATTTAATAATATGATGTGTAATCTGCAATGTATTTACAGATAAATACATACAGTGGAATTCAGGTTTATG CAGGAATTTACAACGTAAGATCTACTAACTTGCTTTGAATGGTGTCCAGCTGAGATCATCTGTGTTAAAT CTAGCAGTTATGTGGGCATAAAACGTCTTGACAGTATTGAATGTCAAACTTTATTGCCAGATGTAGGAAA ATGAACACATTTGAAGTACTGACGCTGGATTCTTAACTTGGTTTTTGTGAAACGATTCTGGGTTTTTTCT CCATTTGTCACATGGAAATTTATCTTGTAACATTGCTATCAATTTTGTGCTCTGCTGCTGTGAAAAAGGA ATGGGGGAGATTCGTTTTTGCTAATGCATATTGGTTCAGAAACGCAACATTTATGTACTGTGTGCCCGAT ATCTCGACTACCCTTGTATGTCATCAGCGGAGACATTGGAAGTAAAGTAAAACACAGGGCATTCGGTCCT CAAGAAATTCAATATGTCAAAACTGATTTTGGGCGATACCACCATGTACCATAACAAGTTTTTGTGATGT ATTGTCAAAAGGTTTGTATTTTTCCATTGGTCCATGTCCACTAGCCTTAGATTATCCCGCGAAACAAATT GACTGCATGTACATGTACCAATGGTTTCCTTAAAGCAACTCGGCAAAGTTTAAAGCCTACATTTAAAGAC CAAGTGAATAATGATAAAATAAATTTAAAAATTAAAGACGTTTGTTCTTTGGTGGTTGCAGTGACAAGAG GTAAGGAACATGATGTTTGAGACCAACTACATACCGTAATTTATGTTCTCAGTATCGTCAATTCCCTATT CACATGTCGTTGGATGTTCATTCTAACAACTGTCAATTATCGGCATATTATGTAATGGTGAATTAAAGTT GTCACGACCAACTGATAAGACGA
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???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
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???blast.wordsize???
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds