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Echinobase
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_038213660.1 PREDICTED: Patiria miniata TATA-binding protein-associated factor 172-like (LOC119738724), transcript variant X2, mRNA CCTGGGTGTCAGACTCGTCAATGACGGTGTTGTCTGAAACGGGAAATTCTTGAAATTGCCGTAAAACGGA CTGATATCTCTGCATAACTATTCCACATCAGATTGATCTGAGTAAATATAGAAAGATAACCGAAGTGTGG ATGCTTGTGGTCAATTACATGGTCATTTTTCCGCGTGGTTTTTATGTTTGCAGTGTGGTAAAGTGTTGAT AATTTTATCGTCTGCATCTCTTTTCGCTCCATCCACTGCATGCACGTATTATCGTATACTGCACACTGAC ACTGTTGACAAGTTGTGCGTGCACAGTTTCTATGGGAGTTGTGTTGGTGGTGGATAAGTCCTCAGTAGGC TCGGTGCACAACAAGCATTCAACCTTCATCGAGAACCCCAACATTTACTGCTTACAATGACAACAAGATT GGATCGTCTGTTCCTTCTGTTGGACACCGGGTCCACCCCAGTCACCCGACGGGCGGCCGCCCAGCAGCTG GGGGAGGTGCAGAGGCTCCACCCACATGAGCTCCACAACCTTCTAGCTAAGATTCACTTTTATTTGAGAA GTTCCACGTGGGAAACCAGAATAGCAGCTGGTCATGCCATAGAGGCTGTAGCTAAGCATGTACCTCACTG GGCACCCATCAAGAAGATCAAAGAAGAGGGTGCGTCGGGGACCGCAACACCACGTATCGCCACACCTACC CACCAGCGGGAGGCTGACCAGCTGAGGTTTGACAAGTTTGACGTGGGTCGGGTCCTGAGGCACGGCTCCT CCCTGCTAGGCTCAGCAGGAACTGAGTATGAGGTGGAGGTTGAGGACCCAGGTTTGGACCCGAAGGAGAG ACTCTCCAAGCAGAGACGACTGTTGCAGAAGCGTCTGGGCCTGGATGTGGGCGGAGTCCTGGGTATGGAC TCGGAGGAGTTGTTTGATGATGAGGACCTGCTGGTGAAGAAGGAGACGCCGTCCGGAGCAGACAATAATA CTCTCAAACTTCCCACCTCTGCTGCTGACATTGTCGCCCAGGAGATGGCACAGATGGGTGCTGGCCTGAG CTCACGGGAGAAAAACCGAGCCAAGCGTAAGGCCAAACTACTCCTGAAACAACGCTCCAAGGAAAACAGT GACGCAATGGGTTCAAGTATGGAGAGTGTTGGTGATGAGCCAGCTAATAAAAAGTCCAAGATTGTCAAGA TAGCCAGCCAGTCCTCATTCTCAGACAAGCAACAGTCAGACCAACTGACAGACAGCAATGTTTTTTATGA AGAGCCTGGTGAGTGGCCCTTTGCCTCATTCTGTGAGCAGCTGAGCACCGATCTCTTCCACCAGTCTTGG GAGGTGCGGCACGGAGCAGCTACCGGCATCAGGGAAGTCATCAAGGTGCACGGCCAGAGCGCTGGCAAGT CTGTGGACCAGCCTTGGGACCAGCAAGAGAGTTTGAATCAGATGTGGATGGAGGACATGGCACTGCGACT ACTCTGTGTTCTGACATTGGACCGTTTCGGGGACTTTGTCTCAGATGAGGTTGTTGCCCCAGTAAGAGAA ACCTGTGCCCAAGCCCTAGGGGTTGTATTACACCATATGACCACCGTTGGTGTGCAGGGTGTGTTAGGGG TCTTGCTTCAGCTACTGTCCCAGGACCAATGGGAGGTCAGGCACGGCGGCCTGCTGGGGATGAAATATCT GCTGGCTGTCAGGAAGGAGATGACAGATGAGTTACTGCCAGCAGTGCTACCCTCCATCGTACGTGGTCTG CAAGACGTAGATGATGATGTCAGGGCAGTAGCTGCAGCAGCGCTCAACCCAGTAGCTGGAGCTCTAGTTA GAGTGTGTCATGCCCAGGTCCCAACAATCCTCAGCACCCTCTGGGATACCCTCTTAGACCTCGATGACCT GACAGCATCCACTAACAGCATCATGACCCTGCTAGCCTCCTTGAACTCCTACCCAGCAGCCTTGGCATGC CTTAGCCAGACGACTACCAGTCTGGTACCTAGACTCTGGCCTTTCCTGAGGCATAATATCACGTCGGTCA GGAGAGCAGTGTTGGAGACGCTCTGCACATTGCTACTTGCAGATAATCAACAGGTTCCTACGGATGTCTG GCTGCCTCCAATCCTGCAGGATGCCTTGAGACACATCTTCCAGCGTTGTATCTTGGAATCAAACCCTGAC ATACTGGCTCTCATTGAAAAGGTATGGGATGCATTGCTAGAGAAGTCCCCACTAGACACCCTAGTGGGTG CATCATGTCCTTACATCAGTGCATGGATGTGCCTGGCCATGCAGCCTTCCAGAGTCCCCATCGATATGCA TATGATGATTGAGGCCAAGCACAAAGTCAAGGAAAGCAAAGGTCTTAACAAGAGCTGGAAGAGCCAACAG ACCATCAAAGAGGATGACAGAGAGTACATTGGCGGGGATGCCGCGCTGGGTGCATCGGTGACAGACAGGG AGGCAGTAGTCCTGCAGGCTAGGACAAGGACTGCCAGGTTACTTGGTCGCATTGCACCGTACATCACCAG CAGCAAACTGGCTGCCGAGCTTAACGCGTCGGAGTCCTTCGGTCAGATTCTCATCTTCCACATCAAGAGC AAGTCAGCGATACAGAGGATGGTGATCGGTCTCATCATTGAAGAATGGGCACGGACTGGCAAGGAATTCC AGTGTCCAGAAGCAGTCAAGACCAAACTACTAGAGGTCTTATCCTGCACGATGTATTTTGACGAAGTGTC GACAGCTTTCATGAAAATGCAGTCAGAATGTAAGATGCTTGTAAGTGCATGGTGCGATGTAAGAAGAGAA GTTCAGCCCGGGCAGTTTCCTAGTGCTTTCACAGTAGAGCAGGCCAACGCCTTGTCAGAGTCCATCCAGG GTCAGCTATTCCAGGCAGGCCTTGGAGCTAGGATCACCCAGGACCTCCAACAGAAATGCAGACAGATACA GGGGAGCATTGAGGAGATCAACACAGAACAGCAGATACTGAGCACAAGGACCCATGCCTGTGTGGCCTCA GCCGTGATTGCCTTGAAAACCCTGCCAGACAAACTGAACCCGATCATCAAGCCTCTCATGGACAGCATGA AGAAAGAACAGATAACAATCATGCAGAGCCATGCAGCCAACAGCCTGGCCAGCCTCCTGGAGCAGTGCAG TCACCGCACCCCTTGCCCCTCCCCGAAGATCCTCAAGAACCTCTGCAACAGTCTCTGCTGTGACCCCAAC ATCACCCCAAACGCCGCCCGGCCCTTGGGCTCCTTAGACCTGTCAGCCAGGCCGCCGTCATTCAGCAAAG GGTCTATAACAGGGTCTGCCACTGGGTCTGCCACGGGGTCTAGACCATCGTCCCCACTCCCTGGGACTGT GACCACCGTGCAGTGTGACAAGAGGGTCGGGATTCTCACATTAGCCAAACAGCAGCAGATAGCAGCCATT ACCGCGGCCAGCCGACGTGCCGCCTACGCCCGATCACGCAGCAAAGAATCCAGTAGCTTCTCCGAGACTG GCCTCTTCCTGGACCCATCCATTCTCACTGACGGGGGTAGCCCCCAGCTCCATCTCCAGCACCGAGGGGC CAAGTTTGCACTGACCACCGTGGCGCGGCACTTTGGTGCCGATCTGATCACCGGCGCTGGCAAGCTGTGG GAGCTGATGGCAGCCCCGCTGCAAGAGCATCTGCACCCATCCAAATTTGATGCCATTTTAGTGGATGACA AGGATGATCTTGCTCAGGAGCTTATTAACACACTGCAGGTGTTTGAGGTTCTATGCCCAGCAGTGCATCA GAGTCTACACCCAAAGCTGACAGCCCTTCTGCCCAACCTGATCCAGTGCCTGCAGTACCCTTACACCGCC GTCCGCCACATGGCAGCCACCAGCCTGGGAGCCCTGGGCCAGGTCTCCATGGCCGAGACCATGAATCGCG TGCTGGAGGACGTCCTGCCACTCCTGGAGGCCGGGGACGGCGAGACGCAGCGCCGGGAGGGAGCCGTCGA GGCCCTGATGTGTCTCATCGAGAGGCTAGGGATGTCCGTGGTGCCATACATCGTGTTGCTGGTGGTGCCA CTGCTGGGGCGGATGAGCGACCAAGCAGAGAGCGTGCGACTGACTGCTACGCACTGCTTTGCCACGCTGA TACGACTCATGCCACTGGAGGCAGGGATCCCGGACCCACCGGCCATGGCAGCCTCCTTGGTCAAGCAGAA GGCTAGGGAACGGCGCTTCCTGGAACAACTCCTAGACAGTAAAAAGCTGGATAACTACGAAGTGCCTGTC ACCATCAAAGCAGAGCTCAGGAAATACCAACAGGATGGTGTGAACTGGTTGGCGTTTCTCAACAAGTACA AGTTGCATGGGATTCTGTGCGACGACATGGGATTGGGCAAGACACTGCAGTCCATCTGCATCATGGCTGG TGACCACTACCTTAGGGATAAAGCTTATAAAAAAACCCACCATGCAGACGCTGCCCCCGTGACATCCATT GTCATCTGTCCGCCCACCCTGACCGGTCACTGGGTCTTTGAGATTGAGAAATTCTGCTCAAGACAGTTCC TCAACCCCCTGCATTACACGGGTCCACCCACCGAACGGCAGATGTTGCGTAGTAGGGTGAAAAAGCACAA CTTGGTTGTAGTGTCCTACGATATAGCTAGGAATGACATCGACTTCTTCAAGACAATCCAGTGGAATTAC TGTATACTTGATGAGGGCCACATCATCAAGAATGGCAAGACCAAGCTGGCTAAGGCTATCAAGCAGCTGA GTGCAGCACACAGGCTCATCCTATCAGGGACACCTATACAGAATAATGTGCTAGAGCTGTGGTCTCTGTT TGACTTCCTGATGCCTGGCTACCTGGGCACTGAGAAGCAGTTCACAGCCAGATACGCCAAGCCCATCATC CAGAGCAGGGACGCCAAGAGCTCCTCCAAGGAACAAGAAGCTGGTGCCTTGGCCATGGAGTCCCTACACA GGCAGGTCCTACCGTTCCTACTCCGACGTCTCAAGGAGGACGTGCTGGACGATCTGCCTCCCAAGATTAT ACAGGACTATTACTGTGAGCTCAGTCCTCTACAGGTGCAACTGTATGAAGACTTTGCCAGGTCGAGAGCC AAGAAGGGTGTAGAGGCAAGCATCGGTAGCCCAGAGGATGAGAGGGAAACTGAGGCCAAGCCCCTGGCAC CGGCTACAAGTCACATATTCCAGGCCCTTCAGTACTTACGCAAGGTCTGCAATCATCCACTTCTGGTGTT AAACAAGAAACATCCCCAGTATGATAATGTCACCGCTCAACTAAGTGATCAGAACACCTCCCTGCATGAT ATCGCACACGCACCCAAATTGACTGCACTCAAGCAGTTACTCCAAGACTGTGGCATCGGCGTGGAGGTCA TGGGTAGTGAGCAGGAGGGATTGACTGAAGCCGTGGTGGGCCAGCACAGGGTACTGCTGTTCTGTCAACT CAAGAGCATGCTGGATATTGTGGAGAAAGACTTACTAAGAAAGCACCTTCCCAATGTAACCTACCTCAGG CTGGACGGCAGCGTACCGGCCGGCCAAAGACATGACATAGTCCACAGATTCAACAATGATCCCTCTATTG ACATCTTGCTGCTCACCACACACGTCGGAGGCTTAGGTCTCAATCTGACGGGAGCAGACACTGTGGTATT TGTGGAGCATGATTGGAACCCTACCAGGGATTTGCAGGCAATGGACAGAGCCCACCGCATCGGTCAGAAG CGAGTGGTCAACGTGTACCGCCTCATCACAAGGGGAACTCTGGAAGAGAAAATTATGGGATTGCAGAAGT TTAAGATGAACATCGCCAACACAGTCATCACCCAGGATAACTCCAGCCTTCAATCCATGGGGACAGATCA GCTTCTGGACTTGTTTTCTCTTGACCAGAATCGTCCAGGAGGGTTGGAGGAATCAAAGCAGGAGGCCTCA GCATCGTCGTTGTCATCTGGGGGAGGCAAGGGCAAGCAGACGGCCGGCAGCGTGCTGCAAGGATTGAGTC AACTCTGGGACGAGAAGCAATACGAGACAGAGTACAATCTGGACAGCTTCATGCAGTCACTGTCTAGTTG ATGTTATAACTAGCGTAGTTGCGTAGACCCTCTATCTGCGGCTAGACTGAAGAGGGCGCTGTCTGCTGTG TCGCCTGACAGTGAGGGCAAGTGAAGAGCACGAGCATTGCACTGGGTGACACGCAATGTCCGTGACACAC AATTGTTAGACTGAGTGTCACCTGGACAGCTTCATGCAGATTTAGACTACTTGGTGTTCTTACTAGCGTT GTCTGTTGGTTCTGTGGCTAGACTGAAGAGGGCGCTGTCTGCTGCGTCGCCTGACTATGAGTGCGACAAT GAAACGACACCAGGAGCTGTACAACCTGAACAGCCTCATGGAGATGTTACGGCCCAACTATGGCATTGTC CCAACTATAGGTTGGACGATTACAACTTTAGACCGTGTCTGTGGCTGGGAATCATACACGAGTCTATGGT AGCGGCTGCGGCCACTTCCTATTGACCCGTGTGTAATTTCAAACCATAGCCAATTAAATTGGACACAGTT ACAATTAGGATCAACCCAAGTATAGTTTGGAATTCCCCAACTATTTGTTTGGACTGTCCCAACAACCGTC CCAACTATGGTTGACACCATTGCCATAGTTGGGCTTACCTATATAGTTCTATGGAAGTTGTCTTTAAATT AGTTAATTCAAACCTGACACATGTAGGACATTTTCTGTGAATCTAACACAGGTTTTCATTAATTATTATC AAGGAACAGATGTCATTTAGCCCTGCTTTCAAAGTATTTTTTTTAAGATTAACAATGTGGTTATATTTTT CTATAATATTGAACCTGCTGTGTTACATTGAAACTTGCATCTTTATGTGTAGAAGGTTTTGTACAGTCAT AAAAAAAACTTTATTTTTGTTCAGTTGCAGATAAAATGAAGATGTTACAAAAGAAAGTGATTATCAAAAA CTTTTGACATTAAAATACAAGTTATTGTTTCAATTGATTGTTGTAATGTGAAGTTACACACAAAAGTGAT TACATGTAAATAAACCTTCGATATTCGCATTGCATATTGGGTATATGACAAACAAAACCAGGCAATTTGT GCACAATTACCTATGGGGCTGTAAACCAGTTAAAACTTTCAACTGATTCCTCCTCAAATATACATCATTA AGAATTTAGTGATCATTTTTTTTTTTAAACATTGTTGTATTGATCATTTGAAATACACTTATTTTAAAAG TTAGTTTTTTAAAGCGTGTCAGGATTCAGATTTTTTCGGGGAATCCCTTCTTATTACTCATTAATATGAA TATTATGACCCTGCAAAAATATTAGCCAATCACAGTCAAGCTTTCATGATCACACCTCCAACTCTGACCA ATCACAATCGCTCGCCTCTGGGATTGTTGACTGGTACCCAGAAAGAAATTTCAAGTTAGTTCATCTTTTA TTTCAAAAGTTTAAAAACTGAAACTTTGTCAATTATATTTCCTTTTATTTCAGAAGTTTAAAAACTGGAT CTTTGTATTTGCAAATGAATTTTTCATATTCTCTATGCATAAGTAGGTGAATTGATCGATTTTGGAAAAA TACTGAAGCAAAACATAACTTGAAGGGAATATACAACATTTGCAAACATC
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???blast.options???
???blast.eval???
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???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
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???blast.wordsize.5???
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???blast.wordsize.14???
???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds