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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_038197494.1 PREDICTED: Patiria miniata RUN domain-containing protein 1-like (LOC119725900), transcript variant X1, mRNA CCAGACGGGTTCATCAGGCAGTCATCTTGGGGTAGCCATGGGGGATTAAGAAGGGGTGGCACACCCTGAT ATATATTTCCGGCCTCGCTTGCTGCGAGTGGGACAAGCGGGTCACAGACAGATATTTCCAGCCTCGCTCG TTGTGTGGTGTTTACGTGTACATCCGTCATCTGTTCCAAGTATCACAAAACCTTTGCACGTGTACAAAAT GTACGCGTCATCCGACGTGAACTGGTTTAGAACTGACTTCACTTTGTTTATTTTGGACATTTTGGACACG TGCTGCATGACCACCAACTCATCTTGTTTTCGGCAGCTACACAGTAAATGTATCGGTACGTCAAACATGT CAAACATGCTGACGTGTACATGGAGCAAGTTCAACTGAGGACATATGTGTGGACTAGTTGATCACTTGAT TGACATGTAGTCTTTTGCCTTCGCACTTCTAGTGGATGTGCTAGATCCTCAATGCCTGTACTGCTTCCTA ACCCCCTGTGTTGTGATGGCTATTGGTAGCCAGCCATGCAACTCACCTGCAAACATGAAATGGGCGTACT GCACCTTTTCTCAACTTTAGAAAACTATAGTGACTGGCGAGTAACTGAGTAGGATCCATAGATGGAATAC TCTTGTAATGAGAAGTACGATAATATAAAGAGAGGGATGAGAACTTGTCTTGTCAGAAACTCTGAATGCT TCTGACGTGACCGTTGGTACAGTGTAATTTTGTGTGTCTCTTGACTGAGAAGTCTGGTAGTGAAAAGGAA GGCAATGATGCATGCGGAAACTTCGTACCAAGAACCTCATACAGTGTACATGTATTTGAAAATCTTGACA TCTATGAAACACATGATCAATCATCAAACATTTGTCAAATGAGAAGCTGAGTGATATTAACCAAAGATGA GGTACCGGTATACGTACATGTACATAAAGTTATCATGGAACTGAATTATCAGTGAGTCTGATATATGTAC CAGCACTTAGCATTCACACGATAATGGCCCAAGCAAACGATGCTCCAGTACTCAGACTGATACCAGATGT GATCCAGCACCAGCCTAGGGCTATCATGAGTCTGGATTCCAGACCACTACAGGCGTGTCGTCTGTACCTG GCTAGTGGAATAAGCACGCATGGAATCTCTAGGGATGTTCATGTGAACATGGTTGACCAGCTGCAGCATC TCGAAGAAGAACAAGAACAATTGAACTCCTCGCTACTTGCTCTGACCACACACTTTGCCCAAGTCCAGTT CCGACTCAAGCAGATCGTCAATGCACCTATTGATGACAAAGAGAATTTGTTGAAGGATCTGGAGGAGTTT GCATTCAAAGGTTGTCCTGATGTCAGAGGAAGCCGTTCACAAGATGCTCAGATGCTAGAAGATGCTAGTG AGAAGGAACATGAGAGTCGTATCACTGAGCAGAGGGAGAAGCAGATGGAGCTGATCAGTCAGCTCAAGAG CCAGCTGGATGACTTGGAACAGTTTGCCTATGAGGAGGGAAGTGGAGAGTTACCTCAGAACATGATCCTG GAGAAGCAGAACGTCATCATTGAGGAGTTGAAACAGAAACTGGGCTTGAACATCGAAGACATGGACAAGC TAACGACAGATGACTTGCGGCAATTGGTGGACAGTGCAATCGGAAGAATAGTGAATCCAGCCAAAGTGAA GGAGACAGTCATCCATCAGCTCAAGAATCAGATTGGTGATCTGGAGCGATTCATTTCATTCCTACAAGGG GAAGCATCTACGCCGGGCCTGGTGACTCCAAACAGCTGCAGCTGCCCTGTCGATGCCAAGGATGATACCA TTTCTGAAGCTGACTCAGAAGCTCCAGACTGCTGTGTGCATCCCAAGGCAGGCAAGCTTGGCAGTAAGCA GAGCACAGCAGAGAGGATAAAGAAGATGCGTGAGAGCCACATTTCCTCCATGAAGAAAGCCTTGGCCCTG CTGCAGTATATGGCCATCACTCAGCTTGGCTGCGGTACCGACAAACTCAAAGAAAAGAAAACTGCTAAGC CAGATGCATCTGATGATTACCGTGAGATGCTGAAAGTTCTGGATGCTGCCGTCAATCATGTGATCATGTT GGCACGGCAACAGCAAGAAAGCCCTGCGGAGGATAGCGACTACACAAGTGATTCCTCAGATAGTCCAGTC AACAGACCTTTGGATGATGTGACTGTCGCAGTGAGGAGAGAGCTTGCCCCGGCACTCAGAGATCTCTTTG AACATGGACAATTTAAACATTCTAGTTCCAGTGATGCATTGATCACTCCAATCACAGCCTGCCTTGCCAC CCACCGAAACACTTCCAGCCAGAAAGTTCATGCTTGGGACCTCTTTGTCAAATACTATGATATCAAGAAG GGAAAGGCTTTTGCTATGTCTCCAGCCAGGAAGCTGTCTCAAGCCTTTGATATTGATATCGTAGGAGGCA CAGCCATTACTGCTAAGCAGACTCTGTTAGCTGCTATTGACTACGTCAGTGGCTCTCATGAACCACTCAA GCGAAGCAAGGAAGCACAGTTTAAAGCCTTCGTGTCAGAAGCACTCAATGGGCAGAAACTGGCCATTTGG TGTCGACTGATCAGCAGAACAACATCTCTGATAGATTATCATTACTATCCCTGGAGCTACATGATGAAGA ATAGTTTTGATGGTGCACTCCAACTTCTGGACAAACTCAGTGAGATCAAATTTCGACTGAATGTGGACAT AGCAGTGCAACAGTTCTACAACATCAAAGATGCCTTCTGATTGGTCTGTATTGTGAAGAGCGTTATTTGG AACTTCTGATTGGCTGGACGTTTCACACCTTGTATTCAGTTTGAACTCTAGCTGCCCAAACTGGCAAGAT TCCCTTTTGTTTTCTTAGATCTTTTCTGATTGGTTAACGAACATAACCAGGTTGTCAGCTGTGCAATCAC ATTCATTGTCTGATGGACAACACCTCACCTTGATATGAACTGTTTTACTGTCCAAGTTGAATATGATTTC ACATGGATAAACTTGTAGTATGGATAAGTTTTAAAGTTTTAAAATTGTAGGTTTGTAATATTTTTATTTA TTTTAAATTAAAAATATACTAGTAGTTAGTATAGGTTTAAAAATAACTGAGTGCAAAAACTCTAATGTAA GGTGTATATGAGAAACAGCTGAATCCACTGTCAATAGTTGCGCATGTTACTGCCATCTGTAGTCAAGCAA TTCAGATTGAGCTGTGCATCATAGGTTCCTGATGGAAGTGTAGTCAGAGTAGATAAGGCTCATTAGTCAC TTTGTATTCTTACAGAAAAGGGAGTAAACATATGATTCCAGCTGCATTTTATGTGCAAATCTAAGATGTG ATAAATGTCTTCTTTTTCATTCAAAATTGATTTGAGCACTGCCTTGGTGTAAGGAGTTCAATGTTCAGGC ATCTTACCATGTTGTTGTTTGTTTTATTTCTCCTTTGAAGTAAAATATGAGTACTGATGTTTGTGTTGGC CAAAGCAGCACAATGGGAGAGAAGTGATATTTTGGCTTCATCAGAAATATGACACAAACCACAATGCAGG GGGCCAGTCCAGTTAACAGTGTTTGAAACCTACTGACCCCATTTTACAACGTATTGTGTCATAAATATGA GGCAATAAGTTCATATCTGTCCAACGTGAATGTTGTGATCACCTTGATAAATTCACCTAGAGCCAATTAA TATTGGTGTTGGAAAAACTTGGTCACCAATTTTAGTTTCCTATTATTATTTTTTTAGATTCAATGACTGA ATTTTTTGTTCTAACAGGCGAATGCCAAGTTATTCATGTTACCTTTGTACATAGCACGAACACTTATATA TATATACATTTGTGGTAATTTACGGAGAAATTATATGGAAATCTAAACAAAAATTTGAAATTTATTGATT TATAACACAGTGTTAAAATTTTGCACTGATGTGATTTGAGAGTGATCTCTGGAAACATTCCAAATGTTTA AGTTAGCTTAGTGGAATGACGACAGGTTCACGTCCAGGATGTGTGTAACTTACAATCAGATGTCAATTAG ATATTAGAGAGAAAATAATGGTTGGGATGACCCTGACAAATAAGAACATACATGCAGTGCAGTTTGGTCC AGACGTAGATTGTAATGGAGCTGCTGTTGATTGGCAAATTGAAAGCAAAACGTACAATGTAGCAGAGACC ATTCACAAACAATATTCGTTATGTGCAATTGTAGCTAGTTACCTTGTTTAGCTCAGTAGAATTATATCAG CTGGAAAATCTTTAGCTCCAGGAAAAACGTAGGTTGCAGGCCGCATTCAGATCTTGTTTTTTTGTCCTTC AAATGTAGCTGCATGTAGTGCATGTACTTGACAAGCTTGACTTACACAAATATGAGTCCCTATCCCCACT TTGATACTGTGGTGGATGAAAGGGATGATATGACGTAACTGTAAACTTGAATAAACCGCTTTCAACGTGT CACATTTTCATTACATGTACAGTATATGATAAATATGGAATGAATTGCCCAAAGAACAGGACATAGGAGC TAGATTTCGTCAATGTATTTGTTTTTAATGAGAATTTTAGTGGAAACAAAAGCAAACAAATTTGGACTGA ATTTCATGTGGAAAATTTCAGATGTGGCTTTGAAATCTAAAAGGATCACTTATCCTTTTGCCTTGCTTAA TTCCTTCATCTGCACTAGTTACATTAATGTTGAGAGTGGTATTTAAGGTACAGAGGGATTGGTCGTTGGT CTTCTAAGAATGCAGTCATTTTTAAGGTAGGGCTGGTTTCAAAGACCAACCACCGATTGCAGGGCGTTGC TTATTGGTTGCAACAAACAATTTGTACTAACCTTCAGCACCATTGTGTGGCATAGATGTCCTAGTGGTTG CACATGCATGGAGATTTGTATATTGTCAGTACAAATGTAATACTGTATCTGCAAATGAAGTTAGCTGACA TGCTTGGTGAAATAGACAAGCTCAGTTAACACAGCAACAATGGTCGTGTTTCAAATACTAGGGCCCAGTT TTATTTGAACTAGGAACGAACTTCATTGTTAAGCAAGTGGACCTGCAAATCAATATTCAACCATGTGAAA GTCGGTTGCAGGTAATATTCATTGCATTGCATTAAGTCCGATAGCCTTTTTTGTAAAGCAAATTTTGTGT GCTTAATTTGCAGAAAGTAGCCCACGCTATAAATAATGGAAGAGTTGCCAAGCCTAGCATTTAAAAAAAA AATGTACCAGGAAGTTTTCTGAAAAAGTTTGCTGTCAGAAATACAGCATATTGTCTGCATTTACTAACTT TATATTGTCACAATAGACGGCCAATTTCTTTTTCTTTAATTTTTTTAACTGGAAGCCAGGATTTCACTTT TTTTGTGGACATTTACTGATGGTTTTCAGTGATAACCCTGAAAACCTGATTTTATTTTAGATAATACTAA CAGCAGGGGGTACCATGCAGCTATGGTATGTATTGTAGTTAATTATAGTATGTCTGTAAAGATGTGTTAG GTTCATGAAAGGGTATGGGAGATGGAAAGAAGTAAGGTCAATAAGAAACAAACTAGAGCTGTAATCCAGT CCAGCCGAGTCAAATCGCAAGTTATTAGGATAAGAATATCTTTGTCACAGTTCATTTGAATAGCTTGTCA CGTGACTTGAGAATGGATAACTTAATTGTGATTGACGTGTGACTCGATTACACATCTGGAAATAACTTTT TAGTTTAATCGATACTCTGTGTGCGGAGTTGTAAAACAGTACTGTACTATATAAGTGTTAAAGGGTATAA AGACGTGTAAATTAGTTTAATTACGAAGTTTGTGCAACAATATGTAACACTAATATTCTTCCAGAGGAAT TCTGTTTAAATCCAGTGCAATACTAAATGTCACTTGGTTTATTTAATTTCACAAGTGGAGTTTTAGGGTA GAAATTTGACACGTGTATTTTTTTCTGTCCAAGTTAATTAAATTTGTGTTGAATTTCTCGAGAGTAGAGT A
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???blast.eval.1???
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???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
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???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds