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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_038190381.1 PREDICTED: Patiria miniata coiled-coil domain-containing protein 180-like (LOC119720631), transcript variant X2, mRNA GTGTATATGTTGCCAAGGAACTGTGAGTCGGGAAGTGCACCAAAAAGGCTTCATTTATTGTCATTTTTCT CAAATTTGACGCTTCAAAACACTTCGAAATCATGGCATTATATATATAAGGAGTTGTGAAATATGTTGTA TTTCGGTAGTTTGTTTTTAGAGGGTAAGATGTCAACTACGCACAAGTAAATCACAAATGAAGGATGTCAT ACTGTGATTGAGTGTGTCAGTGGGATTGAGTTGAGTACTTAGCAAGTCACGGCAGATTAAAGCAGCACTC CAGTTTATCAATGGCAGAGACGCAGGCAAGGCCCCTGCGGGTTGTTCCGTCTGGCAAGATTTATCGACAA ATATTTGATGCTGAGGTCCAACTGGTAAATACCCTGGAGAAGACCAAGCAGAATGTCAAACCGGTTGAAT TAAAGACGGCCTTGATACCGCTGGTCCACGAAGGTCGGACTTCGATGGGAGAAAGCCTACTGACCAACCG ACAGATTGAATGGATCGAGAGCATGCCCAATGACTACAAAACCGAAAATCCAGTTTTGTACAAGAAAGCA AAGGAGGAGCAAATTGCAGCAGCTACAGAGCCTGTGTCGGTGGTAGCAGCCAGAGAAGTCAGGGGCCTGG CAGACTACGTGGAGGCGGAGAAGACTGGTTCTGATATTATTGAGAGGATAGCTGAGAGCCGACGTCTGAG GCACGAGGCGGCCGTAGAGGATCTTCACCAAGATATGACAGTCATTGCTAATGATCTTGAACCCAAGATA GCTGATGCTGGAAGCGAACTCATTAACAAATTGCAGGAAAATGATAAAGAAATTGACAAGATGCTGGCAA GAATTGCACAAGATGATGATCTGAGGGACTACAGCCTTCATGAACTCAATGAGTTGTGGAATCTTATCGG TAGTCAGTCCGTTAGTCGGAGGCAGTGGATTGTGGAACTAGACGACACGCTGGACGGGTTTGAGACACAG AGGCTACAGAGGATCCAAGATGTCCTGAAGTCCTACGCCAAGAACATGGAGAAGATCGCCTTCCTCATGC CGCCAGACGTGCAGCGCCTGATCAGCAAGGAAGCGCAGGTCATCAACCAGACCATTCTCAACAACCGTCG GGCCTACGCGGACCTGAACACCAGACTAATGAAGACGGACGTGGAGAGAGATAAGAACCACCATCGCGTC TGGGAGACCAGGGTGGCAGACTGGAAGCAGCTGAACACTGACGTTGCTGTCGACAAGTTCACGTTATTCA TGCAGAGCGAGGATGTCAAGAATCCCTGCAGGATCGGATTTCTCCTGGATGAGCTGAAGGCGGAACAAAA GATCTTCAACAGCAAGAGGCTGGACCTGCTCCAGGCACTCAGGGAAATGAAGCCACCTGGATCCACCAAG ACAGCCGTGTATGAATGGAACAAGCAGCTGGCTACGGCCAACCAACAGCTGGAACAGCTACACATCAAGT ACCTGGGCAAACTGCACAAGGAGTATGAGAGAGTGTGTCAGGATTGCCTGGATCAGGTGGACAAATACAG GGAGGAGCTCCTTGAGGCAGGGGTGTGCACGGAGGAGAAGGTACAGGAGGTGATCGAGGAGCACTGCCTG CCGCAGGTGGGCAACCAACAGAGGATCTTTGAGAACACACTGGAAACTATTGATAAATCTCTGGAGCAGT TAGCTGACAAGCACAGCGAGCAGTTGCGGTCTCTCTTCAAGTTTTCCCAGGGGGCGGCCCATCTGTGGGA CGTGCATGAGATCGGCCTCGCCAAGAAAGAACGGGACTTACAGGAGAGACTGGAAGACTGCAGACATGAA CATGATAATCAGAACCAGGATATGGAAGCAAATCTTGACATCATCATGGACAGACTGAGGCAAGAAAGCA GTGAGGAAACGTTGAAGGACCGTCTGCAAAAAGCACTGCTCATGCTAGATAAGATCAAAACAAGCTATGA GCAGTTCCACAAGGACCAGATGCGAATTGTGAAGGATTATCCAGATATGGTCAAGGAGGAGCTACGGGGA TACGACGTGGCAGTCTGCACGTTCTTTGAAGTCGACAGGCTGCATCCAACGGAACGGCAACAACTGATAG AGCAAGAGTTGAATGAGGAGGCCAAATCCCGGGGCAAGAAACACCTCAAGAAGAAGACGCATCGCAGCGC GACGCCAGCCGGGGAGCTGACTGCTCCGCCTGACAGTAGGGTGTCCTCCTCAAGATCCGTGACTAGTTAC CCAGGCGATTCGGCCATCAGCCAGAGCCCCGTCCCGATGGCCGTGAAGGAAGTCCTGTCCACCAACGCCG GCACCACCTTCTATGTGCTGACCGTTGCCGGGGAGCATGGGATATCGGAGGAGGATTCTGGGAAGGATCA GGACGGAGGAGGAGCGACGTTTCTGACGGAGAGTGATGCAGCGGAGCGGGAGGCCGTTGCAGCCTACACG GAGAACGTCTTGATCCCTGAGGAGCTGTTCAAAGAACTGCGGAAAATAATGCGTCTAGAGTTTCTGAACC ATCTGGAGATGTGGTCTGTGGAGGCGGTGGAAAGAGCCAACAGTGTGGTAGCAGCCAAGAATGAGGAGTT GAACAGCGAGTTGGATCTCCGCCTTCACCTGCATGGTCCGCGATCCAAGCGTGCTGAGCTGGACATCCAC CACGTCCGTGCCGCCGAGCTGGTCCTCCACCAGGAACGCGTCTCACGCCACTCCAAAGGCATCAACGGCG CCCTCAATGACGTCAAGTCCCGATTTGCCGAGATGCAGCACGAGCACAACCGACTGGCCGAGAAGTTCCG GGACGAGATTGACGCATTGGAGGAGGTGTTTGTCAACGCTAGCAAGTCGGCCACTCTTGTAGCCTTGTCA CATCAGGTCAGCACCAAGGTAGAGACTCACATGGATGTCATCCGTGTCTCACTCAGGCAGTTCCGTCAGT ACCTGGATGACACGCTGCAGATGCTGAGAGAATCCAACGCTAGATTCATCAAGTCATTCAAACTGTTCTC TGACGGTGGCAACTTCTCCCCTGAGGAGATCGACTCCTACAAGAAGAAGCTGGAGAAACTGGCCATCAAG ATAGACTCGGCTGAGGGCTTCGTCATGGCTGACCTTGAAGGCATGGAGGCGAGGAGATTGGAACAGGCGC TGGACATTGCTAACAAATTTGAAGACAGGTTCAAGCACCACCTGTTTGACCTGACCTTCATCGAGAAGCT GACCCGCTGGCTGACCAACACCCAGGTCAAGATCAAGTCGGAGGTCGCCGAGAGTAACGCCCAGGCCCAG GCCCTCATGCATCACCTCAACGTGCTGGAGAGACGCGTGGACGCCTGCGAGAAACCTAACCTGGATAAAG AGCAAATCACGCCCACCCAGCTACTGGACAGTCTCAAGCTGGTCTTCCAGGCCTTTGATGATCGCAGCAA GTACATCAACTGCCTCCGTCATCCGACCTTCCTCATAGACTCCCCGGCCAAGAAATCGGGCCTGCCCAGC CAGAGCGCCAAGGTGGCCTTTACTGGAGAGGAGAAACCACCAACACAACAGACGGGTCAAGGGTCAACGG CCCTGACAACCACGGTTACATTGACGACGCTGAAGGCCGCCAAACCTCAAATTGAGGACTCAGCTGTGTC GCTCATTAAGAACATACTGACGTCCCAAAAGATGAAAGTGAAGCTGAGCGGGGAGGGCGACACACTGGCC GACGCACCCCACACCCCAGGGGTGATCAGACCCCCAGGCACACAGTCCACCATACAGACAGAGGAGGCCA AGGCCCGGGGCCTGGGGCGGGGTGGCCTGCAGGTCAAGAGCCTAGCAGACAAGGACCGAATGAAGCCGGC CAGGAAGGGCATGGGGCAGGGTGTGGAGAGCGGTAATCCTAGGAGAAGTGCCTCAGGGGTACAGCGTAAT AAACACAGCCACCTCAAATTTGATCCAAAATATTACGTCTTTGGAGATAGACCAGAGCGAGAAACGCACT TCCTAGCGCAGATAAGACGTATCTTGCAGGACGCATTGGAAGGACTGCTGATGACTGCGGATCTGTACTA CCGTCAGAAGGGATTGCGGCCACCGACCAGACCACAAGCCATACATGAGACCTTTGAGCTGTGTGCAGAC GTAGTGGTTGCTAAGTTACAGTCCTACTTCATCCAAGCTGAGGAGTATCATAATCAGTGTCTGCAAGAAT TCCGAGAGCAGCTTGAACGCCTTGAGATCTACAACGGCAGAGTACCACCGCTCGTGATCCGAGAGATACT AGACAAGCATCTCAAGATATCTGAGACCTCGCTGTACAAGGTGTCTGAGGGATTCAAGAAGAACATGGGC AGATGGGACAAAGAAAGGTCCGAGCATAAGATCTTACTGCGCCCCACCCTGGGCCATCCCCACAACCGCA ACCAACTGGAGTCACTGTGTGAGAACGAAGACACAAGGAGGAAGGATTACATCAACGGTGTGGAGGCTAA CACACAGAACCTGAAGGACTCGGCCAAGTCTCTGGGTTCAGATTTTGTCCAGGAGCTTGCCAGTACATCA GAGAGACTGCTGTTGATGTTTGACTCACTACTGACCGTCGATGAGGTGGAAGTAGGACGTGTTGATCCTA AACGTCTCAAGACGAGCGCCCTGATTCGCCGCAAGAAAGCCGGCCTGCCATTGGAGGACAACGAGTACGT GCCGCTCATCAAGCGGGGCAGTCGCCAGTGGGCCGGGATACCGACTGACCAGCTGAACGAGGAGAAACAA CGGCCGGTCAAGCCTCAGCTGACCGCTGCAGTGACCACCGGGAAGACCACGCTGGCCCACCAGGCTCTGG TGGATGCTAGGGATGACGTCTTCAAGGACTACCTGACAGCATTTGACAAGAACCTAGCCGACATCGACTG TCAGCAAGAGGAGCAACTAACGGCCGAGAAGCGATGGTCAGAGAGCTGGCAGAGGTCGGTCAAGAAAGTC AAAGACTTGTATTAATATAGACAATTGAGGAAAGTATCGAATCCTGTACAGTTGATAGAATATTGTAAAT AACATCCGGCAAAAGATGAACCTGTTGTAGCATCTATAATCAGGTGGTCAGGTGACTATAGTCAGGTGTC CGACGACCACATGATCATTAATGGTTGCATGATACATCCAGTGTACACATGTATGGTTACTCAAAAAGTG GCCAGTCAGATGTCTTTTCAAATGTCTCAGTCAGGTGACTAGTCAGGTGTCTGATCAGATGTCTGATCAG GTGACTGGTCAGCGGTTTTGTCAGGAGGCGGTTCTTCTGCATCCCAAATAGACCATTATCATGTTGCGGC CATCATGATGTTTTCCCATTCAAATCAACGTAACCAAAGCGAGGCTGGAAGGAAAAATAGTCTGGTTCCT TTTTGCAAAAAGAGCATTATCATTCAGCACTGTTATTGGATACAGGGAGCATGACTAAAATGGTGGCAGC ATGATAAAGGTATAGCCTTAACTCTCACAGCATTTTGAAAGCACTGTGCATTTCCATATTGACGCTCTGA GCCCGTCTTCTCAAACTGGAGCAGATGCTAAGGTTTAATCATTTGTACATACAGTCATTCAAAGCATACC AATCTGGGGATTGTAAAGCGGCATTCGCTTAATGGGCATTTTTTTTACCAATTGAGTCTAATTGAGTCAT TTGGATGAGAAAATTGTACCAATTTAGAAATTCATTAAAAAATTATTTCAAATCTGAACCAGTATGATTA AATTGTTCAGCTTGTACCTACTACCCAATCCAAGGGCTCCGATGACCGTTTTTTCTTCCAGAAAATGCAG ATGTTGCAAAGCATTACACTTGGTTGCTTGCGATGATCAATACATTTATATTCTACATGTATGTGCATAG TTCCTGCGCACATGGAAGTGTTAACCCAAAGACACCAAGTAAACAAAACCATCCGATGAGAGCGCTACCG AAGTAAGAGTACATTATAACACCTGACCGACAGATTCTGTATCTTGATTGGCTGAGAGTGAGTCACATGG CATTTGCTATTTTAACTATCTTGCTGTGCACGGCCAAAAAGACTACACATCTGCCGCGGCCTGAAAAAGC ACTAAAAACAGAAACCAAAGTAACAAGAGTTCAGTGTCAATGAATTTCATATTGAAATACAAGAACATTT TTAATTTGATTTTGGTTGAGTTTATCAGTTACCACTT
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???blast.matrix???
???blast.matrix.blosum62???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds