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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT103143.1 TSA: Strongylocentrotus purpuratus WHL22.492875.0 mRNA sequence CCGCAATCGTAGACCGCGCTGCATGCGTTTATGTGTTTATGCGAAACCGGAAGTAAGTTTCATTTAATTC AAGTTGCACTGCATTGCGCTGTATCTGAACTGAAATTGTTTCTTCATATTTTCACATCCTGTATCAACCG GCTGTTCCAGTCTAAATTGTCCTTTCTCATCTACTCAAGTCATGAATTTGGTTAGCAATTACTTGTCTAC CGTACAGCATACAAACACCACGTTGTAGCTAGCTACGTCCGTCGGCGCGTCCATGTGAACTAATTTGCTT TGTCCTGAGACGGATCACACCGATCATGGCGCAAGATATGCCGTTGGGGCTACATGGGAAGATCAGTCGG GAGAGGGCTGAGGCTCTGCTGAAACCCTGGCAAGACGGGTTCTACCTGATCAGGGAAAGCACCCATTACC CCGGAGACTTCACCCTGTGTGTCTGCATCTCCGGTCGGGTGGAGCACTACCACATCATCACCACACAGAA CCACAACTCGTCGGGAAGAAATTCGTTAACGATAGACGAAGAGGTTTTCTTCCTCAATCTCCAGGAATTG ATACAGCATTATACAGAAGATGCGGATGGGTTGGTGTGTAATTTAAAGAAACCTGTAGAGAGGAAACTTG ATAACATCATGGATGGGCATCACCACTCCCAGAGGGGGCCGCAGCATACGGCTGACGGGTCTTTCAAGAA AGATGGAGATAAAAATGAGATGAAAAATCTCATGTCAGGTCCTTGGGCAGTCAATAAGAATGAACTCAAG CTAGGAGAAGAAATTGGCCATGGATTCTTTGGAGCTGTAAAGGTTGGAGAGTACCAGAACAAGAAAGTAG CAGTGAAAGTGATTTCAGGAGACAATGAAGCAGCCCAGTCTATCGTAGCAGAAGCTTCCATTATGACGCA ATTGAGACATCCAAACTTGGTGGCTCTGATCGGTGTCATCCCAGACCAACCCAACTCAATCTCCATTGTG CTAGAATTCATGGCAAAGGGGAACCTCTTAGACTATGTGAGATCAAGAGGAAGGACAGTCATCACAAGGA AACTCCAGCTCAAGTTTTCAATAGACATAGGAGCAGGAATGTGTTACCTAGAGCAGAAACTCTTTGTCCA TCGGGATCTAGCGGCCAGGAATATTCTCATCTCGGAGGATGACGTTGCTAAGGTGTCTGATTTCGGTCTC GCTCAAGATAACAGTACACAGCTAGGCACAGGAGGCAAGATACCTGTTAAATGGACCGCTCCAGAAGCTT ATAAGAAAAAACTATTCACAACAAAATCTGATGTATGGAGTTTTGGTATACTGCTTTGGGAGCTGTTCTC GTTTGGAAGAGTACCATATCCACGAGTGCCTGCCGATGATGTGATGACGTTCCTGACGGAAGGCAGTCGT ATGCAGGCTCCGGGAGACAACTGCAAGGATGTCCATGAACTCATGATGAAGTGCTGGCAGACGGAACCGG AGAAGAGGCCCACGTTTTCACAGCTCCAAGTGCGGTTAAAAGAATTACCAGCGACGGCGAAGAACGATTC ATGATGCTCCTCACACTGCTTTCAATATGTATATATTGGTGATTGGTCGTAGTTTTAAACTAAAATTAAT TGCCGTTTTGTGTAAATTCTTAGGAAAGGCGGCATCTGCTTAGTTTCTTCTTTTTCTTTTTAATACAGCT GTTGTAAAAACCTGCCAAAAAGTTATTTCCAGACTAGTGTTTACAGGTAAACTACATCTGCCAGAATACT CTTGCTTCAATATGTTTTTCAAAGTCATTGCGTGATACGATGGTCCTTCTATTAATAGCTTCAGTTGCAA AAATTATAACTCTGATTTCACAAGTAATGAAAATCACTAGGATCTTCTTTCGCGAACTCTGTTTCGTTTA TATATTTTCTTATAAGATGCCAGATTTTAAAAATGACTAGGTATGTATAGCTCTTTATGGTACATAATCC AACTTGCTTTCTCTAGAACGTGAGGTAGCATATGCAACAAGGCCATGAAGCTTATATTTATTAGTATTTT GAAAGGCAGTGATATGTTTTTTGAGTATTCATTATTCTGGGAGACAAGACTTTCTAGAGAAATAGCGACA TGTAATTATTTCTTCATCATTTGAATCGCAAAACGCATATATTCGGTATTTACATGAGGATATATATTCT GGAAAAAGCTTTATGCATCTTTAAATGTTTATAACGCCAGAGTTCTGGTTGCCATTTTATTGTCAAAGCT TTATTTGTAAAGTGCTTTATTTGCTTGGAGATGTAAATAAGGGATATGCGTGGAATTGTTCTGCTTAAAA TATAAATTGGTGAACTCTGTATGTACTAGGTTAAAATGTTTGTGGGTGACTTGTCCAGTGTTTCAGAGAG ACAATTATTTACATGTAAATAGAAATAGGAGGTGAAAAGTTGAAAAGGAAAACGTAAGCAGTCTAAAGAA AAGCAGAAGAAAGGCAGTGATTATATTTATCTGTAGAGACAGATAACATTAACTCCTATCTGTCACTGTC TCAATCTGCCTATATTATTAAAACAAAAACATAATTTCTTCTCTATGATTAATGCTGCTCTAAGAATAAG AATTTTAAAAGAAGGTATTGACTGATAAAAGTCTTGATTATCACTTTTGTGCTGGTAGCAAAAGATGTTT GGTGTCTCTTCAAAAAATACTGTATTAAAAAAAAGTCTTATAACCAAGAAAGGGTGACAATGTTGTGTAT TCAATCTTTATCAGGCACTAGACAAGTAATATTTGATATAACACTGGAATTAGTTTTAGGATTGATTTCT TTCATTTTTTTTGGTATTGATTTTTTTTTAATACCATTACACATGTATTACAAATGGATTTCACACTGGT ATACTGACTAATATATTGATTTCAAAATCCTTGTTTATTTTTCATTTGGGGTTGGGGTATCAAGCGGTGC ATTCACATTAACTTAAATTTGTAGACATGTGTGGAGAAAAGTTCAAAATGAAACGAACATGCACCATCCT AAAAAATATTGACAAAAGTGAGAAGTGCTTGATCAAAAAATTTACTAATAGACTTATAAATAAATTCATT TTTTCGTTACTTACTGGTTTTGGCCTAGACTTTGCCATAATTATGCTTTGAGGGCAAGAAATTGAGAGTT AGACAGAAGTGATTTGCTTCAATCGATGTTAAAAAATACCGTGCATTCCAATACCACACAGGGTAGCCGC TGCAGTGTATAACGTAGTTGGCTAGCTAGCTGTCGCTATGCGCGCTAGCGACTGTCGAGCGCGTATGTAC ATTGATATGGTGCAGTACAGCGGGATATGTTGAGGAAAGAGAAAAATCTATACTTTCAATCCTGTATTTG TTTAAAATAAAAAAATCAAGCAAATAGACGTCATTACATACACATTTAAGATATAAAAAAATGGTATGAA TTCAGAGATAGTCTGTATGGCGGTATCACAGTATGAAATTATGATGGCGGTATTCATACAGATGTTAATC TATTACCGTACGGTATTACTAAAACTGGTTAACCGAAAAAAAACTTAATTTATTTCACCATGATGTTCAT GACACTTGCTCCAGAAATTAGGCATTACATTTTGTGTGTGTTTGAAATTATAGTGAAGGCAGCAGGGAGA ATTGAAGTGCACAGAAATATGACATCTTGCTCGTAGATTGATGGAATTCATCTTGTTTTCTCAAATAATA TTGTTTTATTTGGTTGATTTTGATTTATGTTATGTCCTTAAGGAAACCAAGAAGCAGTACATTGATCCTT ACAGAGTATACATTGCAAAGAAAAGAGAGCAAAATAGTGAAGAGCATTAGTTTTGTTGAATGCACCTTTA AAAAACAATAGGTATGCCACCCAGCATATTTTTGTGTGTAGCGCAATACATAATAATATGCCAGTGTATT ACATATCTGCATACATGATATGTTCATGATGTAAAGAAACAGAAGAGAGCCATTGACAGGAAAACAGAGA TTGAACTTGATATTTCAGTTAGTATTATTACTACAATTTTATATCTCTTCCATTGATAGATTTCGGTTGG GTCAATACTCTAAAAAAATTGTGGAATGTAGCTCGTAAGTGAAATTGGACTCTAATTTAAATTTGTGAAT TCTATTTTTATCTAGGCAATGAAAGACGAAGAATGATAGAGAAGAATAGTATGAAACTATACACAGAAAT GATATTGATAATTAGAGATAATACATGGAGCTTAGGAAATATGTGTTTTTCCATCATAAATTATTTTGTG TACTCAAGAAAGCTTCATCCTTTGATGACCGCAACTGAATTTGTAATTTGAATCAAATGATATTTATTTA CTATTTTGAAAGTATTATCGTAGCATATGACGTCATATCTCATAAATCAAAAGATGATTTCATAGAAGCC TTTGAATTTCACCTTACAGTGTAGATTATTTGATTCTAATATATTTAAATAAATATTTGTAGGCAAAATT TGGTTGGGTAGTGTAAAACAAGAACATTTTGCATGCATGAGTGATTCAGATTTGCAAGAAAATGGCAGTC CTTAACAATTTGCAAGAGTTTCATGACGAGAAAGTTTCTCGTTTTAGAGTAATGGATTGAATATTTATAA ATGCCCAATAGTCATATTTTTGTAATACTTCATTTATGCTAAATTAGTCTAGACTGCATGTGGACTAAAT CATCCACTGATGAATGTTAGCAGATCGTTGAATTAAGAGGTGCATTGAATGCTCTATTCACTATTTGATG TAGGTGATATCGCAGATATTCTTTGGATGTGAGTATGATATTCTCACCTTGATTAAGAAAAGAAGAATTG CAGAGTATTTATATGGCCCTGGATGATTAGAGTTCTTTATATCATTTTAAACAACTGAATATACATGTAG AAAGAGTGTACTGTTCATGTTAGCCAAACAGACCTTCGTCATTGAATATGTTTATATCAGGTTTTTGGTT TTTCGTTAACTATGTTTTTGTAAATGTCTTTTATATACACATCAATGCTTCATTGCTACACTGCTTAAAA TATGAAACTTACTGACCGTTCTGATAACAAATTTAAAAACAAATCTGTTAAACCTCAGTGCCAATATTCT TGACTACCAAGATATTAGTGAGTTCTAGGAGCACAATTGATAAAACTTCTTTTTGTTGTAGATTATTCAT AACTTAAGTTGCATTATGTTGACAATGTTTATTTTTCTTCATTTACGGTAGTTATACATGTATCTCAAAG ATTACGTCTTTCATATTTTTGTACGATTTGTAAACGTCCAACCAGGTGCCTTCATATATGAAATCAATGA TTTGTTAAAAAATTAATTATTTTTGTTTGTGAGACATTAGTGCTCCAGACCGTACACTTACTCTAGCTTC TTTATGCATGGGATGAATATAGTTTCTTACCATGGATGGCAAAAGACCATTGCACCATTTTTCAGTTCAT AGGAAACATATGTATCAGTTGTAGAAATTTTTTTTTAATGAGCAGTAATTGAATTACACAATCTGTTTGG CACTAACTTTACTGGTTAAATTGATATTTAGGTTCTCACTTTTTCATATGACTTTGACATAGACAGTTGA TATACTTGCTATGAAATCAGTGTTGAGAAAATGAAATCAACTTTAAGATTAAATCGATGATATTGGCATT ACATCAGAGCGTTTGGCATATCGTCTGTTTTTGGAGCCAGATGGGTTTTTAGGAAGGTTTAAAGATTTGA ACTTGACTCATAAGACTATACTGTTTTTTTCTATATAATTTTCATTCTTAATCATTGTACAGTTATTTAT GCAAAATTTACTTGATGAGCCTTTTCTCTTATCACATGAAAATGTCCATTGTATATAATACCGCTTCAAT AAATATAAGAGATCAAGATGAATTGTATGTATGCAGTAAATATAAATAATTTTTTCAAGGTCAACTTAAA AAAAAGAATATGATTTGTAAATCTAATCATAACATAATTGAAAGCACAAATTGTCTTCTGCTTTTAATAT TTATTAATTGCTTCTTGCTGCAAAGAAGGTTATATTTTGATGAAAAATTACATTTTTCACTCAAATAAAA GTATCAAGAATTTTGCTTGCCTGCTTGATTTGCTCGGTTGTAAAATTGAGAAACTAGAAAGTTGATTTCT AAGTGAGAGACATCAGCCCTGCCTGTGAATGAGCCCATAATATTACCTTTCTGTGTTAAAACCAGATGGG TGTAATAAACTTTGTTTTAGACAATGGTACCCAATGTAAGATATAAGATGTACCCAAACATCTGTTTGTA ATGATGAGGTGGTACATTTATACCTAATAGACTTGTCCTAATTAAGTACATTATTTTGAAGGCCTTTGTA ATTAATGAGTCAATGCAGAAAACTACTTTTATATCGTGCTGCTTTATAGACATTTATTTACGTCCGTGCT TCTTTGAAAAATGTTTGTTTTTTGCATAGGGTTTTGTTTAGAGATTCTTGAAGCAGTGAGTGGATGACAG CTGGATTTAACATTCTGTCTGTAAGCTCTACTATAAGATTGAACATACAATTGTAAAATGACATTTTAAA GAAAACAAATATAATATTGAATAAATGAGAATGACATGCAGAATATTGTATCTTGCTTTGTTGTTTGTTG AAATGTG
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???blast.eval???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds