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Echinobase
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Echinobase Accession
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Echinoderm mRNA
Echinoderm protein
Echinoderm CDS
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>JT111855.1 TSA: Strongylocentrotus purpuratus WHL22.742180.0 mRNA sequence ACATGTTTTCTACTTACAAGTTGACGAGAACATGAAAGCCTATTGCCTTGGCGAGTGTGCGGTCTCTGGA CCTGACTGTACGCCGAAGAGCTGGCTGGGACCGAAGCGACGAGTCCGTTAGAGCCGGTGACAACTGTGTG ATAAAGTCTTCCCCAACTCGGCGCCAATCGGCATGGTTGTCCCGCAAAATTAAGCATTGCGGTAGTCAAA TGTTTTTTCGAAAATGATCAGAGCAATACAATCAAACTTGAAATATCACTTTAACCTTCAGAAGTGATTG AAAGGCTGTTTATTTAAGCCTGTGAACGATAACAATTTTCGTCAGGTTTTTTAGCTGGTTGTGTGTGTAT CGCCATCTTCATCACTTGCATAATTTGCGGAAAGTCGATTACGTAACAGACGGACCGAGTCAGCTGTTCA TGCACCTGGAAAAAGACTGGATGAATGCATGCATTTCGACGCGGCATCGGAATCATTAGCCGGACGTGGA CTATCAACATTTATTCATCTTATCGCATGAGATCATGTGCCGTATGTGGTGAAGAAGTCTCAATGGCAAC ATCTTCTATTTCATCATCCGGAGTCTCGTGTGAGGAAGATCCTCCAGTTATGACAGAAAACATCCTGGTA GACTCGATGCCAACAAGAATTATCAAGGTTGGAGGAGAGATCTCGAAAACCAAGGATGGAGTAATTTCTC CAAAGGTTCTCTTTCTAGTCATTCCAGGCAATCCTGGCGTACCAGAGTTTTATGAGGTGTTCTGTCAGAC CCTGTACAAGGCAAGCGGCTACACCATACCAGCATGGGCAGTGTCACATGCAGGTCACAGCGAGGTACCG CACAGCATACAGGAGAAACTGAGAGCAACGGACCGTGATGATGAAATTTACAACCTCCAGCAGCAGATTG AGCATAAAATGGCTTTCATTGAAGACTGCATCCCTCCAGGAGTCAAGCTCATCCTGATAGGTCATTCTGT AGGATGCTACATCATTGTGGACCTCATCCGACGCATGCCCAAACTTAACCTCCTGAGGGCGGTGTTGCTC TTCCCCACTGTTGAGCACATATGGGACACCCCAAACGGACGTACAATCGGGAACATGGTGGTCTACCTGA GATGGGCTGCAGTGGCTCTGTCTCACGTCGGCTATTACCTCTCGGACTGGGTGAAGTGGAGACTGATACA GTGGTGGTTCAAAGGCAGAAAAATCCCAGACTGTGCATTCCATGCCATTCAGCAGCTAACAGACCCAGCC CGCATCCACAACAGCATGTACATGGCCGCAACGGAAATGGAAGAAATTCTGGAAGCAGACGTCTCCACCA TCCAAGACAACCTGGAAAAGTTCATCATGTACTATGGGTCAAAGGACAATTGGGCTCCGAGAAGCCACTA CGAGAGCATGCGCAGGCGGTTTCCAGAGGGCGACATTCGATTATGTCGGCGGGGCATGCAGCACGCGTTC TGCTTAGATTCGAGTGAACTGATGGCAGACATGGTCTGGAATTGGATGAGCTCGTCCATTCAAGAGGTTC AATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATTGATATAATGTTATTTTGATTCAC AATTGCCTCATGAAGTGACATTGTGAAATGTCAGGTTTTAAAATAATGTGAAAGGAAGTCTACAAATTAT CAAGTGCTTGCTATTCATTTCTGTTATAGAGAAAGTGGCTTCAGATCAGTCAAATTCTAGAACTTTGATG TTGATGTGGTAATTGTACAAATCATGTGTCATATCAAGTATCCAGTTTTAAGAGCTGGAGTCCCAACTAA AAACAAATTATTTCAAGCAGCTGCCATTTTCTAAGGTTACACAATTGAAGAAAAAATTTGAAAGTGGCCC GTTAGTTAGCAGCTAGGCGGGAATCTTTTATCTACGTATCTGCAAGAAAGATTCAGTTAAGCACATGTCT GACATATGTTCTCCTGGCGGCATCGAAGATGGTACAAAGAGAATGAGCTAGATAGGACTCCAACTCTTAA AACTCCTTGGTCATATACACTTCAACATTTAATTGTATCATTTAAGTTCTATATAAACATTTAACAAAGT CACAAAAGCAGATAAAATGTTCATTAATTTGGCTCAGAATATAATATGAAAAATCCCTGGAAGTTTGAAT GAGTATGATTAGTATTTAGTATTGAAAAAAAAAACATTGTTTATTTTCAGCATAAATAATAGAATTTCCA CTAGTATTGGAATCCAAACTTTACCCCAAAATCGTAGCATTCCTTCATAATGAGTAATTACAAAGGAATT TTATGCTGCTGTTGACATCCATATAGTCTTGCTCAATTCAGGGTTTCCACTGATTTGTAAATAACAATCT GGATTTATAAATCCCTTAATGCCATCTGTAAGTGCTTAACAGATATTATCACCCCTGTCATCGGGTTCAT TCAAGCACAATGTGCACCATCTCCACTCCCCGAGGAGTATTCCTGCCATATGGTCACTGTGAGGCCATAC GGCAATTACTAACACAAAAGTTTTCATGATCCTACTACATCCCCATTTCTCTCCAGGGTATGGAGTGGCA AATGTAGCCTAAGACCTTGCGACATTTAACATGCATTTCTTTAAAAAGTTGATTACCGTGTGTAAAGTGA GACTATGCCAACACTCAGGAAAGATGTTGATGTGTAATTTTGAGGATTCTAATGACTTTCATTCAACAGG GTTATTCCAAATATATTTGATCGCCTCACGAGTGAATTGATATGATTGTATGCACTTGCCCAACTGATGT TGCCAAGATATTGTAGTACAGCCTTGCCATGTTGTCAGGGTTCTTGAGTGAATTTTGAATTAGATGTATT AGATATTGAAATGCTTTACTTGCCAAACGGGGTAAGATGATTCTAGTTTTCTTACTATCAGCACAGGAGG AAGCAGGAAAAAAATAATTCTTATATTCATGTTCTTTATTCCTGTTACGCACAAGAATATCTGTTACATG TTGTATTTTATATATCAAGCAATTGAGATTTATGGCATTCATCAGCAACAGTGATTTACGGTAAATGGCA TTTTCAAAAATGCAACAAACGTTATACTCTATGCAACAATAGTTGTAAACAAATAAAGATACTAGCTGTA CACATACTCGGGACAGAAAAGAAATGGATTTTATATAGTAATGTGGTTATATATTCTATACAAAAGTTTA ATTTTCCAGCATAAAGAACTATTTAGGCAATAGTTGTCTTCCAGTTTTGTCATATTGTATTGTGTACCAT TATGAGTTCTGGTATGTAATTCCATCTGGTTTTCTTAATGCAATTGTCTTTTTGATGTGACAAATCCGTA AGTAATCTTGCCTGGCTATTCAATTATATAAACCAAGTGAAATTTATAGTAATTTTAAATTTAATTTTAA ATCCAGCTTTCTTGTTAGTTTATGATGGAACTTTAATATGATGGGACCACATAGAGTTCTTTAGAATTGA ATTGGAGTATGTACATTTTGAATGGCATGTGTTAATATATTTTATTCTACCTAAAGCTGCAACAATGTAA GTTTGATATTCAATTTGTGATGATAATCTTTGAATATTTCATCTGTGTGTCTGTGTATGCAATGAAGAAT ATGTGATGCAGAAATACATGTATTTATTCTGAAAGGGAATTAGATCGCTATGTATTCAGAGGAAGATTTT TATATTGATGTGATACGTTATTGTCTTCTTTGTCTTAAAATCATCATTATGAAATATGAATTCCATTTTT CAGTAAGAGATGTTGCAAGTACTGTACTACAAATACTAGTGTAACGTACGATATATTGTCAAAATTATTT CAGACATTTTGTTTAACCTTTCTTGTGCTTAAAGCCTCGGTCACAGATGCCATTACGAACGATTTTCAGA CAATGAAAATTCGTGAAGACAATGGAAAAACACAGGGAGATTCGTACAAAATTATCGTTCGTACAAACCT TTGTGACCCTAGCATAGGTTATATTAATCTATTTGTCTAAAATCCACTTTGCATTACATTCGTACATACC ACCTAATAAATATGAAATATAGAAACAGATTCATTTGCTGTGAGTTTTATTCCATAAATCAGACCTTCCA TCATTTACATCAATGAATAAATAATTAGTGAAAATAGTCTTCCAAACAAAGCCACACGTTCCATAAGACA AGAAAAGCATGTACATTAAACTTCAAGAAGTCAATTTCCCCTATGGCTAGATAATTGATTTGATAACATG TATTATAAGTTTTATACCATGCATTACTTTTGTTTCTTGTACTCTGAATAATAAAAATCAAGTATAGTGG CACATACAGCTCTGACAATAGTGGTCCACCTCCTTGTGTATATCAACAGTACACGACTATCAAAACAAGA ACAAAAATTCTACTCGCTAACTCATATTGAGTGGACAAATGAAAAACTACCCAGTCAGAAGACTACGGAG TTGGCTATAGTAAGCAGGGCCGTTTCATAAAAGTAAGTGGTTCACTTTTCTTTTTACTCCAGAGCTGTAA ATGTACATTTGAATAATAATTGTATCAAACCTGCATTGAATTCATAATTAAAATTAAAAATTATTGAATA ATAAGTACATTCCTTAAATCAATGGTATCTATTAAAAAAAATTAAGCGCATTTAATACCCTTACAAAGGT GATCAGAAGAAGAAGAAAAAATTAAGAAATTGAAGCAATTTACTGGTAAATTGGTTACATTGCATGCATA CACATAATAAAAGCAAAAATTGACTTTCACACACAATACATATGTACGTTAAATGAAGAAAAAAAAATCA TATAGCTAAAAGCATTCATTCACATGAACCCAAACTTTCTGACTGCACATACACGTGTTGTGAATCTCTA TGAGGAATTTCAGATTATCCAAGCAAATTTTAATTCAAAATATTCATTTTCCTATTCATCAAGAACTACT GCTGATAAAATTGTTTAAAGAAATACTTAGGTGACAAATGTTGTGAAATAAAAGGTAAAATGCATTGCGA GTACAAGAATAGCGATGATAGAGAGGGAGAGAAAGATGGTCGTGAAAGAAAACTTGAAGAAAAAAAAGGA TGAAATGGGAGTAAATGAAGTTGAGAGGGCAAAGAAGTGAAATCATATATGTAACGTCTGTAACTCATGT ATTTAAACACAGTTAATGCCCTTCTGGCCCCAAACAGATGATAAACAGATCATATAGTGAAGTGGGAACA TAATGTAACAACAACAAAAACAAAAAATAAAAGCGCGGCAAGTTTAAAAAAAAAAAAACATGTTCAAGTG AAGATTAATAAAAATGCAAATTGCAACATGGATGAATGAATTTTTTAGAAATAAAACACATTTTTTCCGC TAAAAGGATTTGATTCACACCTACATGTATCAATTAATGCTTGAATTCATAATTAATACTTACCATGTTT TCATAATCCACACTCACAATCTTTAGACACATAATCTTAGATCTATATATTTCTTGCATTTGTTCCATGC TGCCATCATAGCTTTCAGCAAGTCGTATACCAAATGAATAAAAAACACACTGGACCTTATTTGATGAAAT AAAGAACCACTTTTGGAAGACTTGTCTCGTACAGGCACACTCAAAAATCCAGATTCTAATTTTGCAGATT TAGTTCAGAATATTCTATACACAATTATGTCTTCATATCTTTTTATATTTGTTATGCAAACAATCATTAT TCCACTAAATACTACGATAGAGATTTATGTTGCGGAGTTCGTATTAAAGTTGCTCAAGAGCACATTACAA GATTATTATGCAATCCTTTTTCTACCAGGTATGTTTCGGCATAGTCGAGCAAAAGGGAGTACCTGTAAAT AACTTGCTACATATAACATGGATGCTACAGCCAGTTTTAAACTTAAAGGTACTATGTCCCTTTTGCAGCC AACCTCAAATTCTGTAGAACTTTGCAGGAATTATGAATATGTCATGTATGTCCTATCTGTGAAATTTAAA CGTTAGCAGTGTCCTAATATTCAAATTACGCAAGGAAACCTGTTTACTTGCTAGACTTCACTGTCAGACA CTATTGAGTGACTGACTGGCTTTTCTTCTTCTTTGGTAATAACATACAAAGGGTACATGAGCATTTGTCT ACATCAATGACCCACTTCTTGTGATGGCCAAAATTAACTGATTGAATCTTTGCGCAGCATAAAACGTATG AGTATGACCATTCAGTACAATGGTCTGAAAATCAAGACTATTACTTATTGGCTCTATAGCTCCTTCGATT TGACAACTAATACCGGTAGTCGTTATTTTCCCACTTGAAGACATTTTCAAGCCCCACCTTTTTAAGGAAG TTCTAAATTAGTATTATCTTTCAAATGCTGTTGAAATTAAACCTTTTCATTTAAGCCTGCAAATGGGACA TAGTACCTTTAACTGAGATCTGTGTTATAAGACCCAGAAATGTGAGGCATATTACACTTAAAGGTAAAGA CCAGTTTTGGAAACGTCCCCCTCTCAAAAAATGAAATGGAAG
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???blast.matrix???
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???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds