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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030973436.1 PREDICTED: Strongylocentrotus purpuratus CLIP-associating protein 1 (LOC581599), transcript variant X8, mRNA TAATGACGTCACACATTTGAAATCGGTCAACATGGCGGTACTCTCGATACTAGTCAAAACACTAATGGCT AGCTACTAACGACGATTGCACTCGGCTTCCAATGAAAATATGCACGAAATTTGGAGCTTAACAAGAGGAT TGCATTCTACAGTGTTAACAAAGGAGGATTACATGTGAACACCCTGTTGTCTGAAGAGGGAAATACCTTC AAGTGCTGCTATTTTAGGTTTCGTTTATGATCATCAAACCGGAAGTCACACAGGAAGAGTATCAGTATAC GTCCATCTAATCTGAGAGAACATTAATAGTTCATAGCTGCTCAATAGTAGGAAGAAAATAGATCAGACAC TGCAGAGACAAGATACATATAAACCATGTAACAAAAAGGGTTTCCTGTCAAACAATTTCCAGACTACATG CATTTTATTCTTTGAGCTCATCGCCCTGCAGAGGAAATATCTATCCTGTAGTGCTGCAGGATTTTTTATA CTCGTGAATTTGCCTCCTTTGGAGGGGCCAGACTGTGGACATGGCAGGGAAGACGTTGGATGACATCTTC AATGATGTTCTGAAGCAGGACACTACGTCCAAGTTTCAGGCTTCAGAGGATTTGCAGAACTATCTCCAGG ACAATGAGAATTCTATGCATTGTGACAACATGGACAGATTGGTGGATGCCCTGGCAGGATGGGTCAATAG TAGCAATTTCAAGATATCCCTCTGTGGTCTTGAGTGTCTACTGCTGCTTGTCGATAGAATAGGAGAAAAA TTCAAGAATCATATAGGAACAGTTTTACCGGCAGCACTTGACAGATTGGGAGATAGCAAGGAGCAGGTTC GAGAACATTCTCAAGCTCTCATTCAAAAGCTGATGTCACCTGCTTCTGCACCACAGTTTGTATTTGAGAG GCTGATGAAAGGATTTTCGCACAAAGGCTGGCGTGTTCGAGAGGAAGTTCTACTATGTTTAATGCAGACG ATTAATGTATTTGGTGCTAATTCATTATTACTAAATAAAATAGTTCCATCAATATGCAAGCTTCTCGGGG ATCCCAACAGTCAAGTAAGAGACACAGCAATCAACACTCTAGTTGAGATATACAGACATGTAGGAGAGAA GGTTAGGATAGACCTGGGAAAAAAGGGCATTCCATCATCAAGGTTATCTATTATTTATGCCAAGTTTGAT GATGTGAAGCGGTCTGGACAAATGTTGGTGCAGCCTGAACAAAGTGCTCCTGCCAAACCATCAGCATCAC AAGATGAGACAGACAGTAAGCCTGCTGCTGCACAAAAAACTGCCCCTGCTAAGAGGCCTACCACATCCAC AACACAACGAAAGTCCATCAGTAGACCATCAACAGGCGCAAGCAGTGGTGCAGTGGATGAGGCTCTCTTT CAAGCTTCCTATGAAGATGTCCCTAGTGTCTCAATATTCACAACGAAACAGTTGGAGGATGACCTGAGTA AGATGTCTACTATTCTGAACAATGATAAAGCAGATTGGGAACTTAGAGTAACGGCATTGAAGAAATTACG GGCATTCATCATAGCTGGTGCTGCAGAGTACGAATGCTTTGGTCAATCACTCAGACAGATGGAAGAGGCC CTCATTATGTCCGTCAAGGATCTAAGGTCAACGGTCTTGAGAGAAGCTTGCATCACATTAGCGTTTTTGT CCATTCGTCTGAGGCGGCAGTTTGACCACGCAGCAGAGGCAGTCTTACCCCATTTGTTTACCCACATCCA GAATAGTGTAAAGATTATGGCAACATCAGGCATCGTTGCAATAGATGTTATCATTAGGCATACACATTCA CCTAGGCTTATATCTATTATGAAAAGCAACGCAACTTCTAAGTCAACTGCCATTAGGAAGCAAACATTTC AATACATTAACACGGTTTTGAATGTATGGGACACACATACATTGGAGAGGCATGCTAACCTACTCTCAGA GGCCATACACAAGGGTATTGAGGATGCTGATTCAGAAGCAAGGGCTATCTCAAGAAAAGCATTCTGGAAG TTCTCAGAGCACTTCAAGAGCCATGCCGACAAGTTGTTCAACAACCTGGATCCCTCCAAGCAGAAGATGC TACAAGGAGAGCTCAGCCAAGCCTCCAGCTGTACCTCTCTAGACGGCAGGCCGCTCTCACGCTCCGCCAC CGCCAGCTCGCATGAAAATCTAAGGACTGCCAGCTTGCCAAGGAGATCAGTAGCATCAAGGTCAAATCGA GCATCAGAGTCTTTTCGGACCAGAGCGGACAAGCCCGCCCTCTTGAATCAACGTTCCAGCAGTGAGATCA ACTTGGCGGCTGCGTCACGGGCCCGATCGCGGTATTCGTCGGCAGGTCAGAGGGCAGCCAGCGGGGCGGC GGCAAGAATTTCTAGATCTAAATCCACCTCTCGGGAGAGCTTGGCTGCCACTCCAAGAGGGTCCTCTCTC CTTCAGACTCCTAACGGTCGTGCAGGGAGAACACGATCTAGAATCGGGATTTCCCAATCACAACCTGGTA GCAGATCTAACAGTCGATCAAGCTCACCTTCGACAGTCTCCTCCAGATATTCCAACATCCAGACCAACGG CAGGACAAGAAGAAAGAGCGGTATCCCAGTGCCTCGCAGTCAGGGAGCAAGCAGAGAGGCCAGTCCTAGC AGATATGGATATGCTAGTGCACGAGAGAGGCGGCAGAGTGGATCATCTCTTGGTCCAGCCCAGAGGGAGC CTAAGGAGAAGCAGAACATCATGGCCCAGAGAGTCCTGGTCCCTGGTCAAGATGCTGAAGCTGCCCTAGC TGATGCTCTGATATCCGCCCAGAGAGCCCTCAGGAGCAACTATGGGTTCAGTTACGATTCCGATTACACC GACAATTTGGCCCAGAAGGTGATGCTAAAGAAGAGATATGATAATAACTTCTCCGACGATGAGAGCGATG CTTCCAGTGTGTGTTCTGTTGGATCGTATGGTTCGGGACCAGCAAAGATTATCGAGGATGTACCTGAAGT CCTAAATAAGATGGCAAGTCCTGCATGGTCAGAGAGGAAAGAAGGATTGATAGGTCTTCAGTACACCCTA CATAGCAACAGAGCACTCAGTCGATCTGAAATCAAGAGAGTGACAGAGTTATTCTCAAGGATGTTTGCTG ACCCATCGAGCAAGACATTCAGCTTGTTTCTGGAGACCCTAGGGGAGTTCATCATTGTTCACAAAGCTGA GCTTCTAGATTGGTTATTTGTACTCATCACAAGGCTATTACAGAAGATGGGTTCTGATCTATTGGGTTCA GTTCTCAACAAGGTTCAAAGGACTCTAGAAATTGTCAGAGAAAGCTTCCCATATGAGATCCAATTCAGGA TACTAACCAAGTACATCATGGACCAGACACAAACACCAAACATGAAGACAAAGGTTGCGATGCTTCGATT CATGGAGAGCTTGACAGACGTAATGGATCCTGCAGACTTCAGCAACTCAGCGGAAACCAGGCTGGCTGTG TCCAGGATCATAGGATGGACCAAAGAGGCCAAGAGCCCTGAAGTCAGGAGGGCATCCCAAGCTGTGTTGA TAGCTCTGTTTGAACTCAACACCCCAGAATTTAGCATGATGTTATCTGTACTACCCAAGACCTACCAGGA GGGGGCGACCAAGCTCTTGCGCAATGACCTGCGTATCGCATCCAGCATTGATGATGAGATTACTGCTCAG GAGTACAGGAGTAAGGCATCTCCACGGTCAGTCCTGAAAGCCTCCCCTCGATCAACAGGTTCCTCACCCC GTGGGAGCTATGCCAGCAATGGCCCTCCAGACACCGAGTTCCTCAACTCTGAAGACATCTACGACTCACT GCGCCGAACCACCGCCGAGATTCAGAACTATATGCACAGCAGCCGCGACGACCTGGACCATGTGGCTGTC ACCAAGGACACGCGGGTGGACAGTGATGAGGTATTGCCTGACCTGGTGCCAGGCATTAGAGTGGACAGTC CCGAGGGCAAGGTCAAGGAGTACCTGGAGTACCGTATGGTATCTGACCCAGACTCCATGCTGTCACCCCC ACCAATCACCCACAGTAGATCCTTCGGGGACTACCGTTCAGTAAGCGGTGCACGCTCTCCCACCCCACAA AAAAAGTTCCATGCTGCCTCCTCCTCCTCCCAAGCCGAGTCCCGCAGCAAGGGCAGACCAAGACTGAAAA TCCCTTCGGCTGACGGGCGGGGATCGCGCACCCAATCCCCTGCTGCCCAGAACAGAGCTCGTGCACGCTC CTCATCCCCATCTCCTCCTGCTCTTGCTAATCAATGTTTCACAGATTATGACTCCTCCTCTCCTACCCCA CCTGTCTTCTCTCCAGATGCCCTCTCTGAACCTGTCTATAATCCCCTCCCTATGCCCACCAATGCTTTGT ATCGTGAGTCTGCTTCACCTGTCTCTTCTCGTAAAAACCCTCCTTCTTCCCGGGGCATAGCAGATACCAT GGGTAGAATGACAGTGACCGACGGTAATTACGAGGATGAGACTTTCCCCGAAGTAGATCACCAAGATATT CTGGTTCCTCTTTTGACTGAGCTGTCCAATCATAATGGAAGGTTTGAAGAGAGAAAGAATGCAATGATGC AGCTAATCCGTCTCACCCGGTCTGAGAGCCTCTCGCTTTGGGATGATCACTTCAAGACGGTGCTCCTTCT TATGCTGGAGACATTAGGAGATGTAGAGTCATCAATCCGAGCCATGGCACTGCGTGTCCTTCGAGAGATC CTCCGGAATCAACCTGATCGCTTCAAGGACTATGCTGAGCTTACAATCCTCAAGATATTGGAGGCACACA GGGATCCACACAGTGAGGTTGTAAGACAGGCAGAGGAGACTTCAGCCACCCTGGCTATTTCCATTGCTCC TAGCCAGTGTGTCCGAGTCTTGTGTCCTATCATCCAGACAGCTGACTGCCCCATCAACCAGGCTGCCATC AAGATGTTAACCAAGGTTGTTGAACTGATGTCAGAAGCAGACGTACTGGAAATCTTACCCGAAGTGATTG TAGTTCTACTCAAGTCGTATGATCACACTGAGAGTAGTGTCCGAAAGGCCAGCGTCTTTTGCCTGGTGGC CATCTATAACATCATAGGAGATAAACTCAAAGAGAAGCTAGCGGACCTACCAGGGAGTAAGATGAAGCTG TTGAACCTGTACATTAAGCGTGCTCAAGCCGAGAAGGAAGCTCAGACACCCTCTCCCAGTAGTCCTTCAG CTTTATCCACTGGCAGCAGATAGTAGCCGTCCCAATATCAGACTGTACGCACTAACAAACACATGCCCCT GTGGATGGGACTGTTATTAGAGACCTGAGCAAGAACTCTGAATCGGTGCACCATCAGGATACATTTACAT GCCATAAGTGTGTAATGAATTCAATAACCTGCAAGCACTCTTCTCAAGTAAATGTATCCGCAATTAGCTG ACCCAGAATCAGATTGTCACCCGCAGCACATATGGGAATCAATGGATGGGACTATTAGGAGAGAACTGAT CAGGAATTCTCACAGGTAGTGCAACATCCATGACTGTAGTATAGGCTGTTAAAGTGTGATCTACTCAGAA TCCCATCAGTTCTCTCTTCTGGTAGTAGAGAGTAGTGGATCAAACTATGTTAACTAACACATACTCCTTA GGGTGGGACTGTTAAAAAGACATGATGAAGAACTCAGCTACTTAGTCTATTATGACACTGCACTATATTT ATGTGTGTCTAGCAACATCTTTGAAAGCGACAGGGAATTCTCTACAGGTTTTCCTTCACTGTCCGAAGAT CAGACTTTGTAAACCATCACACTCGCACGCCTGCACCCAACTATGGATAAGACTATGGGCAGAAGTAAGG TGATTAGGGATTCATGTGCCACTGCTTAACATGAGACTATGCGAGCTGTCTGTCAGGATCTCTTAATAAT GCACATTCTAAATCAATGATCTCATCAGGATTTCAACCTTTGTTTAGCTCCCTCTTAAGAAATTAATCAG CTCACCTGCTGAGAGCAAGAAGGTCACTAACTCTATGCAAGTGTATGTGATTAACTCCCTACTGGTTCTC AATAGAAAATCCCTATTTGTCAATGCCACTATTGGCCATTGTTGGAAATAATGTCAATATGTTCTTTATG AGAGGCATGTATAAGGCTACAAGTCATCCTTTCTAAAGGCTTTTAAGGTCACAACACTTTGGAAAAGTCA TCAAAAGTTCCTGCAACAATGTAGCCAGGTGCATACTTGTCAGTATACATTGTACATGAACTTATGAAAA TAGATCAATGCAGTTATGGATTACAGAAGATTAAGGCACCCTTCTATAAAAGTATTGAGTGCATGAGGTA CATCTGTACTTATGTAAGGTAATATTGCGCAAAAGATAGGACATTAGGTGGTATTGATTGAAACTTGCGA CCCTTGGTGAGCAGTTGAATTTAGGTAGCTAACAACATTTTTGTATGAAATATTGAACCTCACTGCCATT TATGTCAAAGCTGTGGTGATTTGAGAACAATCTCTTAAGGGAAGATGAACTATAGTGTTATTGGCTGGCC AAAGTTTGATCATTTGTATTCTTGATATTATCAAATATAAACTCATTATTCTTTCATTTTGATGACTTTT TTCTCAAGGAAACTTTTAAAATTGACTAATATACTCAGATTGAATTAATATCATTCACAAATTGAAGATT CTAGAAGCAGTGTACCAATTGAACACGAGAATTTAGATATTTGATAATAGTGAAAAAATTCCAATAGGAT ATACAAAAATATATGACTCACAAATAAGGAGAGTGTTAGCGGGCAAGAAATTATCATTATTATTCATATT TACATAATGACAAACACATATCTTTGGGAAAAGGGGCCTCCTTATTATATTTTGTATGAGAAAGTTGGCA TCATTATTTGGGGGAATGAAAGAATTTTTGATTGATTTATTTGAGGGCCAAATCAGGAAATTGATAGAGC AATGGTTTTCAGTCCAATGTAGAATGGTTTTGAATAATGTTGAATTCTGGTCATTTGGTTTTGATGTTAC ACGTATCTGAAATTAACATGTTTATGGTATAGACACCAGAAAGATAGATTGAAGGAAATATGTATATAAT TGCACAACGAAGAATGATTTGGGCACTTTTCGTCTGTTTGTTCACATACATAATGGTATTTTAGCAAGCC TTTGAAATGTCAAAATTGTATTTATTGTATGCTATGATAAAAAGTATAACAACTTGGCAAGGACACAATA AATGTCTATTTAATCAAGAACAACTTCTTCATTCACCACTATCACAACCATTTGCCCAAATGGTATTGAA ATCTGGATCAATTTAGCCAAAGAAAAACATGCAGCCCTTTTTGTCCCCTGCTCATATGTTTCAATGTGTA TTGTTTATTTTGTATTATCTCTTTTTGGTCAGGAGATTCATGGTATAAATTCTACATAGCTTATTTTTAA TATGTGCCTTCACGGTTTTTCATCTCAAAGCATCAATGGACATCTGCTTAGGATGGAAGTAAATTTTCAC CTTCGCCGCGATCAGCAATTTTTTGTTGGATTTTTTGAGAATTATATGCATTGCATTAAACCTGTTGATA TTCATCTCATGGTTATATTTGTTTTTATAAATAAAATCAAACAACATAAGAGAGGGTTTTAGAAAAATTC TAACAGAATCCAACAAAAATCGCTGAATACTCATCTAAAACCCTCTCTGTGTTATTAGACTTTATGTATA AAATAAATATAAC
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???blast.options???
???blast.eval???
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???blast.eval.10???
???blast.eval.1???
???blast.eval.001???
???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
???blast.numalign.25???
???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
???blast.wordsize.2???
???blast.wordsize.3???
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???blast.wordsize.5???
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???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
???blast.off???
BLAST time is limited to 30 seconds