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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030973441.1 PREDICTED: Strongylocentrotus purpuratus CLIP-associating protein 1 (LOC581599), transcript variant X13, mRNA TAATGACGTCACACATTTGAAATCGGTCAACATGGCGGTACTCTCGATACTAGTCAAAACACTAATGGCT AGCTACTAACGACGATTGCACTCGGCTTCCAATGAAAATATGCACGAAATTTGGAGCTTAACAAGAGGAT TGCATTCTACAGTGTTAACAAAGGAGGATTACATGTGAACACCCTGTTGTCTGAAGAGGGAAATACCTTC AAGTGCTGCTATTTTAGGTTTCGTTTATGATCATCAAACCGGAAGTCACACAGGAAGAGTATCAGTATAC GTCCATCTAATCTGAGAGAACATTAATAGTTCATAGCTGCTCAATAGTAGGAAGAAAATAGATCAGACAC TGCAGAGACAAGATACATATAAACCATGTAACAAAAAGGGTTTCCTGTCAAACAATTTCCAGACTACATG CATTTTATTCTTTGAGCTCATCGCCCTGCAGAGGAAATATCTATCCTGTAGTGCTGCAGGATTTTTTATA CTCGTGAATTTGCCTCCTTTGGAGGGGCCAGACTGTGGACATGGCAGGGAAGACGTTGGATGACATCTTC AATGATGTTCTGAAGCAGGACACTACGTCCAAGTTTCAGGCTTCAGAGGATTTGCAGAACTATCTCCAGG ACAATGAGAATTCTATGCATTGTGACAACATGGACAGATTGGTGGATGCCCTGGCAGGATGGGTCAATAG TAGCAATTTCAAGATATCCCTCTGTGGTCTTGAGTGTCTACTGCTGCTTGTCGATAGAATAGGAGAAAAA TTCAAGAATCATATAGGAACAGTTTTACCGGCAGCACTTGACAGATTGGGAGATAGCAAGGAGCAGGTTC GAGAACATTCTCAAGCTCTCATTCAAAAGCTGATGTCACCTGCTTCTGCACCACAGTTTGTATTTGAGAG GCTGATGAAAGGATTTTCGCACAAAGGCTGGCGTGTTCGAGAGGAAGTTCTACTATGTTTAATGCAGACG ATTAATGTATTTGGTGCTAATTCATTATTACTAAATAAAATAGTTCCATCAATATGCAAGCTTCTCGGGG ATCCCAACAGTCAAGTAAGAGACACAGCAATCAACACTCTAGTTGAGATATACAGACATGTAGGAGAGAA GGTTAGGATAGACCTGGGAAAAAAGGGCATTCCATCATCAAGGTTATCTATTATTTATGCCAAGTTTGAT GATGTGAAGCGGTCTGGACAAATGTTGGTGCAGCCTGAACAAAGTGCTCCTGCCAAACCATCAGCATCAC AAGATGAGACAGACAGTAAGCCTGCTGCTGCACAAAAAACTGCCCCTGCTAAGAGGCCTACCACATCCAC AACACAACGAAAGTCCATCAGTAGACCATCAACAGGCGCAAGCAGTGGTGCAGTGGATGAGGCTCTCTTT CAAGCTTCCTATGAAGATGTCCCTAGTGTCTCAATATTCACAACGAAACAGTTGGAGGATGACCTGAGTA AGATGTCTACTATTCTGAACAATGATAAAGCAGATTGGGAACTTAGAGTAACGGCATTGAAGAAATTACG GGCATTCATCATAGCTGGTGCTGCAGAGTACGAATGCTTTGGTCAATCACTCAGACAGATGGAAGAGGCC CTCATTATGTCCGTCAAGGATCTAAGGTCAACGGTCTTGAGAGAAGCTTGCATCACATTAGCGTTTTTGT CCATTCGTCTGAGGCGGCAGTTTGACCACGCAGCAGAGGCAGTCTTACCCCATTTGTTTACCCACATCCA GAATAGTGTAAAGATTATGGCAACATCAGGCATCGTTGCAATAGATGTTATCATTAGGCATACACATTCA CCTAGGCTTATATCTATTATGAAAAGCAACGCAACTTCTAAGTCAACTGCCATTAGGAAGCAAACATTTC AATACATTAACACGGTTTTGAATGTATGGGACACACATACATTGGAGAGGCATGCTAACCTACTCTCAGA GGCCATACACAAGGGTATTGAGGATGCTGATTCAGAAGCAAGGGCTATCTCAAGAAAAGCATTCTGGAAG TTCTCAGAGCACTTCAAGAGCCATGCCGACAAGTTGTTCAACAACCTGGATCCCTCCAAGCAGAAGATGC TACAAGGAGAGCTCAGCCAAGCCTCCAGCTGTACCTCTCTAGACGGCAGGCCGCTCTCACGCTCCGCCAC CGCCAGCTCGCATGAAAATCTAAGGTTGGCTAGGGATTACAACACGGTGACTGCCAGCTTGCCAAGGAGA TCAGTAGCATCAAGGTCAAATCGAGCATCAGAGTCTTCTGCCACTCCAAGAGGGTCCTCTCTCCTTCAGA CTCCTAACGGTCGTGCAGGGAGAACACGATCTAGAATCGGGATTTCCCAATCACAACCTGGTAGCAGATC TAACAGTCGATCAAGCTCACCTTCGACAGTCTCCTCCAGATATTCCAACATCCAGACCAACGGCAGGACA AGAAGAAAGAGCGGTATCCCAGTGCCTCGCAGTCAGGGAGCAAGCAGAGAGGCCAGTCCTAGCAGATATG GATATGCTAGTGCACGAGAGAGGCGGCAGAGTGGATCATCTCTTGGTCCAGCCCAGAGGGAGCCTAAGGA GAAGCAGAACATCATGGCCCAGAGAGTCCTGGTCCCTGGTCAAGATGCTGAAGCTGCCCTAGCTGATGCT CTGATATCCGCCCAGAGAGCCCTCAGGAGCAACTATGGGTTCAGTTACGATTCCGATTACACCGACAATT TGGCCCAGAAGGTGATGCTAAAGAAGAGATATGATAATAACTTCTCCGACGATGAGAGCGATGCTTCCAG TGTGTGTTCTGTTGGATCGTATGGTTCGGGACCAGCAAAGATTATCGAGGATGTACCTGAAGTCCTAAAT AAGATGGCAAGTCCTGCATGGTCAGAGAGGAAAGAAGGATTGATAGGTCTTCAGTACACCCTACATAGCA ACAGAGCACTCAGTCGATCTGAAATCAAGAGAGTGACAGAGTTATTCTCAAGGATGTTTGCTGACCCATC GAGCAAGACATTCAGCTTGTTTCTGGAGACCCTAGGGGAGTTCATCATTGTTCACAAAGCTGAGCTTCTA GATTGGTTATTTGTACTCATCACAAGGCTATTACAGAAGATGGGTTCTGATCTATTGGGTTCAGTTCTCA ACAAGGTTCAAAGGACTCTAGAAATTGTCAGAGAAAGCTTCCCATATGAGATCCAATTCAGGATACTAAC CAAGTACATCATGGACCAGACACAAACACCAAACATGAAGACAAAGGTTGCGATGCTTCGATTCATGGAG AGCTTGACAGACGTAATGGATCCTGCAGACTTCAGCAACTCAGCGGAAACCAGGCTGGCTGTGTCCAGGA TCATAGGATGGACCAAAGAGGCCAAGAGCCCTGAAGTCAGGAGGGCATCCCAAGCTGTGTTGATAGCTCT GTTTGAACTCAACACCCCAGAATTTAGCATGATGTTATCTGTACTACCCAAGACCTACCAGGAGGGGGCG ACCAAGCTCTTGCGCAATGACCTGCGTATCGCATCCAGCATTGATGATGAGATTACTGCTCAGGAGTACA GGAGTAAGGCATCTCCACGGTCAGTCCTGAAAGCCTCCCCTCGATCAACAGGTTCCTCACCCCGTGGGAG CTATGCCAGCAATGGCCCTCCAGACACCGAGTTCCTCAACTCTGAAGACATCTACGACTCACTGCGCCGA ACCACCGCCGAGATTCAGAACTATATGCACAGCAGCCGCGACGACCTGGACCATGTGGCTGTCACCAAGG ACACGCGGGTGGACAGTGATGAGGTATTGCCTGACCTGGTGCCAGGCATTAGAGTGGACAGTCCCGAGGG CAAGGTCAAGGAGTACCTGGAGTACCGTATGGTATCTGACCCAGACTCCATGCTGTCACCCCCACCAATC ACCCACAGTAGATCCTTCGGGGACTACCGTTCAGTAAGCGGTGCACGCTCTCCCACCCCACAAAAAAAGT TCCATGCTGCCTCCTCCTCCTCCCAAGCCGAGTCCCGCAGCAAGGGCAGACCAAGACTGAAAATCCCTTC GGCTGACGGGCGGGGATCGCGCACCCAATCCCCTGCTGCCCAGAACAGAGCTCGTGCACGCTCCTCATCC CCATCTCCTCCTGCTCTTGCTAATCAATGTTTCACAGATTATGACTCCTCCTCTCCTACCCCACCTGTCT TCTCTCCAGATGCCCTCTCTGAACCTGTCTATAATCCCCTCCCTATGCCCACCAATGCTTTGTATCGTGA GTCTGCTTCACCTGTCTCTTCTCGTAAAAACCCTCCTTCTTCCCGGGGCATAGCAGATACCATGGGTAGA ATGACAGTGACCGACGGTAATTACGAGGATGAGACTTTCCCCGAAGTAGATCACCAAGATATTCTGGTTC CTCTTTTGACTGAGCTGTCCAATCATAATGGAAGGTTTGAAGAGAGAAAGAATGCAATGATGCAGCTAAT CCGTCTCACCCGGTCTGAGAGCCTCTCGCTTTGGGATGATCACTTCAAGACGGTGCTCCTTCTTATGCTG GAGACATTAGGAGATGTAGAGTCATCAATCCGAGCCATGGCACTGCGTGTCCTTCGAGAGATCCTCCGGA ATCAACCTGATCGCTTCAAGGACTATGCTGAGCTTACAATCCTCAAGATATTGGAGGCACACAGGGATCC ACACAGTGAGGTTGTAAGACAGGCAGAGGAGACTTCAGCCACCCTGGCTATTTCCATTGCTCCTAGCCAG TGTGTCCGAGTCTTGTGTCCTATCATCCAGACAGCTGACTGCCCCATCAACCAGGCTGCCATCAAGATGT TAACCAAGGTTGTTGAACTGATGTCAGAAGCAGACGTACTGGAAATCTTACCCGAAGTGATTGTAGTTCT ACTCAAGTCGTATGATCACACTGAGAGTAGTGTCCGAAAGGCCAGCGTCTTTTGCCTGGTGGCCATCTAT AACATCATAGGAGATAAACTCAAAGAGAAGCTAGCGGACCTACCAGGGAGTAAGATGAAGCTGTTGAACC TGTACATTAAGCGTGCTCAAGCCGAGAAGGAAGCTCAGACACCCTCTCCCAGTAGTCCTTCAGCTTTATC CACTGGCAGCAGATAGTAGCCGTCCCAATATCAGACTGTACGCACTAACAAACACATGCCCCTGTGGATG GGACTGTTATTAGAGACCTGAGCAAGAACTCTGAATCGGTGCACCATCAGGATACATTTACATGCCATAA GTGTGTAATGAATTCAATAACCTGCAAGCACTCTTCTCAAGTAAATGTATCCGCAATTAGCTGACCCAGA ATCAGATTGTCACCCGCAGCACATATGGGAATCAATGGATGGGACTATTAGGAGAGAACTGATCAGGAAT TCTCACAGGTAGTGCAACATCCATGACTGTAGTATAGGCTGTTAAAGTGTGATCTACTCAGAATCCCATC AGTTCTCTCTTCTGGTAGTAGAGAGTAGTGGATCAAACTATGTTAACTAACACATACTCCTTAGGGTGGG ACTGTTAAAAAGACATGATGAAGAACTCAGCTACTTAGTCTATTATGACACTGCACTATATTTATGTGTG TCTAGCAACATCTTTGAAAGCGACAGGGAATTCTCTACAGGTTTTCCTTCACTGTCCGAAGATCAGACTT TGTAAACCATCACACTCGCACGCCTGCACCCAACTATGGATAAGACTATGGGCAGAAGTAAGGTGATTAG GGATTCATGTGCCACTGCTTAACATGAGACTATGCGAGCTGTCTGTCAGGATCTCTTAATAATGCACATT CTAAATCAATGATCTCATCAGGATTTCAACCTTTGTTTAGCTCCCTCTTAAGAAATTAATCAGCTCACCT GCTGAGAGCAAGAAGGTCACTAACTCTATGCAAGTGTATGTGATTAACTCCCTACTGGTTCTCAATAGAA AATCCCTATTTGTCAATGCCACTATTGGCCATTGTTGGAAATAATGTCAATATGTTCTTTATGAGAGGCA TGTATAAGGCTACAAGTCATCCTTTCTAAAGGCTTTTAAGGTCACAACACTTTGGAAAAGTCATCAAAAG TTCCTGCAACAATGTAGCCAGGTGCATACTTGTCAGTATACATTGTACATGAACTTATGAAAATAGATCA ATGCAGTTATGGATTACAGAAGATTAAGGCACCCTTCTATAAAAGTATTGAGTGCATGAGGTACATCTGT ACTTATGTAAGGTAATATTGCGCAAAAGATAGGACATTAGGTGGTATTGATTGAAACTTGCGACCCTTGG TGAGCAGTTGAATTTAGGTAGCTAACAACATTTTTGTATGAAATATTGAACCTCACTGCCATTTATGTCA AAGCTGTGGTGATTTGAGAACAATCTCTTAAGGGAAGATGAACTATAGTGTTATTGGCTGGCCAAAGTTT GATCATTTGTATTCTTGATATTATCAAATATAAACTCATTATTCTTTCATTTTGATGACTTTTTTCTCAA GGAAACTTTTAAAATTGACTAATATACTCAGATTGAATTAATATCATTCACAAATTGAAGATTCTAGAAG CAGTGTACCAATTGAACACGAGAATTTAGATATTTGATAATAGTGAAAAAATTCCAATAGGATATACAAA AATATATGACTCACAAATAAGGAGAGTGTTAGCGGGCAAGAAATTATCATTATTATTCATATTTACATAA TGACAAACACATATCTTTGGGAAAAGGGGCCTCCTTATTATATTTTGTATGAGAAAGTTGGCATCATTAT TTGGGGGAATGAAAGAATTTTTGATTGATTTATTTGAGGGCCAAATCAGGAAATTGATAGAGCAATGGTT TTCAGTCCAATGTAGAATGGTTTTGAATAATGTTGAATTCTGGTCATTTGGTTTTGATGTTACACGTATC TGAAATTAACATGTTTATGGTATAGACACCAGAAAGATAGATTGAAGGAAATATGTATATAATTGCACAA CGAAGAATGATTTGGGCACTTTTCGTCTGTTTGTTCACATACATAATGGTATTTTAGCAAGCCTTTGAAA TGTCAAAATTGTATTTATTGTATGCTATGATAAAAAGTATAACAACTTGGCAAGGACACAATAAATGTCT ATTTAATCAAGAACAACTTCTTCATTCACCACTATCACAACCATTTGCCCAAATGGTATTGAAATCTGGA TCAATTTAGCCAAAGAAAAACATGCAGCCCTTTTTGTCCCCTGCTCATATGTTTCAATGTGTATTGTTTA TTTTGTATTATCTCTTTTTGGTCAGGAGATTCATGGTATAAATTCTACATAGCTTATTTTTAATATGTGC CTTCACGGTTTTTCATCTCAAAGCATCAATGGACATCTGCTTAGGATGGAAGTAAATTTTCACCTTCGCC GCGATCAGCAATTTTTTGTTGGATTTTTTGAGAATTATATGCATTGCATTAAACCTGTTGATATTCATCT CATGGTTATATTTGTTTTTATAAATAAAATCAAACAACATAAGAGAGGGTTTTAGAAAAATTCTAACAGA ATCCAACAAAAATCGCTGAATACTCATCTAAAACCCTCTCTGTGTTATTAGACTTTATGTATAAAATAAA TATAAC
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???blast.eval.1???
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???blast.eval.minus5???
???blast.eval.minus25???
???blast.eval.minus50???
???blast.eval.minus100???
???blast.numalign???
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???blast.numalign.1???
???blast.numalign.5???
???blast.numalign.50???
???blast.numalign.100???
???blast.wordsize???
???blast.wordsize.default???
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???blast.wordsize.5???
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???blast.wordsize.15???
???blast.wordsize.default.message???
???blast.matrix???
???blast.matrix.blosum62???
???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
???blast.filtering???
???blast.on???
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BLAST time is limited to 30 seconds