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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus (
Purple sea urchin
) 5.0
L. variegatus (
Green sea urchin
) 3.0
P. miniata (
Bat star
) 3.0
A. planci (
Crown-of-thorns
) 1.0
L. pictus (
Painted urchin
) 2.1
A. rubens (
Sugar star
) 1.3
A. japonica (
Feather star
) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030973442.1 PREDICTED: Strongylocentrotus purpuratus CLIP-associating protein 1 (LOC581599), transcript variant X14, mRNA TAATGACGTCACACATTTGAAATCGGTCAACATGGCGGTACTCTCGATACTAGTCAAAACACTAATGGCT AGCTACTAACGACGATTGCACTCGGCTTCCAATGAAAATATGCACGAAATTTGGAGCTTAACAAGAGGAT TGCATTCTACAGTGTTAACAAAGGAGGATTACATGTGAACACCCTGTTGTCTGAAGAGGGAAATACCTTC AAGTGCTGCTATTTTAGGTTTCGTTTATGATCATCAAACCGGAAGTCACACAGGAAGAGTATCAGTATAC GTCCATCTAATCTGAGAGAACATTAATAGTTCATAGCTGCTCAATAGTAGGAAGAAAATAGATCAGACAC TGCAGAGACAAGATACATATAAACCATGTAACAAAAAGGGTTTCCTGTCAAACAATTTCCAGACTACATG CATTTTATTCTTTGAGCTCATCGCCCTGCAGAGGAAATATCTATCCTGTAGTGCTGCAGGATTTTTTATA CTCGTGAATTTGCCTCCTTTGGAGGGGCCAGACTGTGGACATGGCAGGGAAGACGTTGGATGACATCTTC AATGATGTTCTGAAGCAGGACACTACGTCCAAGTTTCAGGCTTCAGAGGATTTGCAGAACTATCTCCAGG ACAATGAGAATTCTATGCATTGTGACAACATGGACAGATTGGTGGATGCCCTGGCAGGATGGGTCAATAG TAGCAATTTCAAGATATCCCTCTGTGGTCTTGAGTGTCTACTGCTGCTTGTCGATAGAATAGGAGAAAAA TTCAAGAATCATATAGGAACAGTTTTACCGGCAGCACTTGACAGATTGGGAGATAGCAAGGAGCAGGTTC GAGAACATTCTCAAGCTCTCATTCAAAAGCTGATGTCACCTGCTTCTGCACCACAGTTTGTATTTGAGAG GCTGATGAAAGGATTTTCGCACAAAGGCTGGCGTGTTCGAGAGGAAGTTCTACTATGTTTAATGCAGACG ATTAATGTATTTGGTGCTAATTCATTATTACTAAATAAAATAGTTCCATCAATATGCAAGCTTCTCGGGG ATCCCAACAGTCAAGTAAGAGACACAGCAATCAACACTCTAGTTGAGATATACAGACATGTAGGAGAGAA GGTTAGGATAGACCTGGGAAAAAAGGGCATTCCATCATCAAGGTTATCTATTATTTATGCCAAGTTTGAT GATGTGAAGCGGTCTGGACAAATGTTGGTGCAGCCTGAACAAAGTGCTCCTGCCAAACCATCAGCATCAC AAGATGAGACAGACAGTAAGCCTGCTGCTGCACAAAAAACTGCCCCTGCTAAGAGGCCTACCACATCCAC AACACAACGAAAGTCCATCAGTAGACCATCAACAGGCGCAAGCAGTGGTGCAGTGGATGAGGCTCTCTTT CAAGCTTCCTATGAAGATGTCCCTAGTGTCTCAATATTCACAACGAAACAGTTGGAGGATGACCTGAGTA AGATGTCTACTATTCTGAACAATGATAAAGCAGATTGGGAACTTAGAGTAACGGCATTGAAGAAATTACG GGCATTCATCATAGCTGGTGCTGCAGAGTACGAATGCTTTGGTCAATCACTCAGACAGATGGAAGAGGCC CTCATTATGTCCGTCAAGGATCTAAGGTCAACGGTCTTGAGAGAAGCTTGCATCACATTAGCGTTTTTGT CCATTCGTCTGAGGCGGCAGTTTGACCACGCAGCAGAGGCAGTCTTACCCCATTTGTTTACCCACATCCA GAATAGTGTAAAGATTATGGCAACATCAGGCATCGTTGCAATAGATGTTATCATTAGGCATACACATTCA CCTAGGCTTATATCTATTATGAAAAGCAACGCAACTTCTAAGTCAACTGCCATTAGGAAGCAAACATTTC AATACATTAACACGGTTTTGAATGTATGGGACACACATACATTGGAGAGGCATGCTAACCTACTCTCAGA GGCCATACACAAGGGTATTGAGGATGCTGATTCAGAAGCAAGGGCTATCTCAAGAAAAGCATTCTGGAAG TTCTCAGAGCACTTCAAGAGCCATGCCGACAAGTTGTTCAACAACCTGGATCCCTCCAAGCAGAAGATGC TACAAGGAGAGCTCAGCCAAGCCTCCAGCTGTACCTCTCTAGACGGCAGGCCGCTCTCACGCTCCGCCAC CGCCAGCTCGCATGAAAATCTAAGGTTGGCTAGGGATTACAAGACTGCCAGCTTGCCAAGGAGATCAGTA GCATCAAGGTCAAATCGAGCATCAGAGTCTTCTGCCACTCCAAGAGGGTCCTCTCTCCTTCAGACTCCTA ACGGTCGTGCAGGGAGAACACGATCTAGAATCGGGATTTCCCAATCACAACCTGGTAGCAGATCTAACAG TCGATCAAGCTCACCTTCGACAGTCTCCTCCAGATATTCCAACATCCAGACCAACGGCAGGACAAGAAGA AAGAGCGGTATCCCAGTGCCTCGCAGTCAGGGAGCAAGCAGAGAGGCCAGTCCTAGCAGATATGGATATG CTAGTGCACGAGAGAGGCGGCAGAGTGGATCATCTCTTGGTCCAGCCCAGAGGGAGCCTAAGGAGAAGCA GAACATCATGGCCCAGAGAGTCCTGGTCCCTGGTCAAGATGCTGAAGCTGCCCTAGCTGATGCTCTGATA TCCGCCCAGAGAGCCCTCAGGAGCAACTATGGGTTCAGTTACGATTCCGATTACACCGACAATTTGGCCC AGAAGGTGATGCTAAAGAAGAGATATGATAATAACTTCTCCGACGATGAGAGCGATGCTTCCAGTGTGTG TTCTGTTGGATCGTATGGTTCGGGACCAGCAAAGATTATCGAGGATGTACCTGAAGTCCTAAATAAGATG GCAAGTCCTGCATGGTCAGAGAGGAAAGAAGGATTGATAGGTCTTCAGTACACCCTACATAGCAACAGAG CACTCAGTCGATCTGAAATCAAGAGAGTGACAGAGTTATTCTCAAGGATGTTTGCTGACCCATCGAGCAA GACATTCAGCTTGTTTCTGGAGACCCTAGGGGAGTTCATCATTGTTCACAAAGCTGAGCTTCTAGATTGG TTATTTGTACTCATCACAAGGCTATTACAGAAGATGGGTTCTGATCTATTGGGTTCAGTTCTCAACAAGG TTCAAAGGACTCTAGAAATTGTCAGAGAAAGCTTCCCATATGAGATCCAATTCAGGATACTAACCAAGTA CATCATGGACCAGACACAAACACCAAACATGAAGACAAAGGTTGCGATGCTTCGATTCATGGAGAGCTTG ACAGACGTAATGGATCCTGCAGACTTCAGCAACTCAGCGGAAACCAGGCTGGCTGTGTCCAGGATCATAG GATGGACCAAAGAGGCCAAGAGCCCTGAAGTCAGGAGGGCATCCCAAGCTGTGTTGATAGCTCTGTTTGA ACTCAACACCCCAGAATTTAGCATGATGTTATCTGTACTACCCAAGACCTACCAGGAGGGGGCGACCAAG CTCTTGCGCAATGACCTGCGTATCGCATCCAGCATTGATGATGAGATTACTGCTCAGGAGTACAGGAGTA AGGCATCTCCACGGTCAGTCCTGAAAGCCTCCCCTCGATCAACAGGTTCCTCACCCCGTGGGAGCTATGC CAGCAATGGCCCTCCAGACACCGAGTTCCTCAACTCTGAAGACATCTACGACTCACTGCGCCGAACCACC GCCGAGATTCAGAACTATATGCACAGCAGCCGCGACGACCTGGACCATGTGGCTGTCACCAAGGACACGC GGGTGGACAGTGATGAGGTATTGCCTGACCTGGTGCCAGGCATTAGAGTGGACAGTCCCGAGGGCAAGGT CAAGGAGTACCTGGAGTACCGTATGGTATCTGACCCAGACTCCATGCTGTCACCCCCACCAATCACCCAC AGTAGATCCTTCGGGGACTACCGTTCAGTAAGCGGTGCACGCTCTCCCACCCCACAAAAAAAGTTCCATG CTGCCTCCTCCTCCTCCCAAGCCGAGTCCCGCAGCAAGGGCAGACCAAGACTGAAAATCCCTTCGGCTGA CGGGCGGGGATCGCGCACCCAATCCCCTGCTGCCCAGAACAGAGCTCGTGCACGCTCCTCATCCCCATCT CCTCCTGCTCTTGCTAATCAATGTTTCACAGATTATGACTCCTCCTCTCCTACCCCACCTGTCTTCTCTC CAGATGCCCTCTCTGAACCTGTCTATAATCCCCTCCCTATGCCCACCAATGCTTTGTATCGTGAGTCTGC TTCACCTGTCTCTTCTCGTAAAAACCCTCCTTCTTCCCGGGGCATAGCAGATACCATGGGTAGAATGACA GTGACCGACGGTAATTACGAGGATGAGACTTTCCCCGAAGTAGATCACCAAGATATTCTGGTTCCTCTTT TGACTGAGCTGTCCAATCATAATGGAAGGTTTGAAGAGAGAAAGAATGCAATGATGCAGCTAATCCGTCT CACCCGGTCTGAGAGCCTCTCGCTTTGGGATGATCACTTCAAGACGGTGCTCCTTCTTATGCTGGAGACA TTAGGAGATGTAGAGTCATCAATCCGAGCCATGGCACTGCGTGTCCTTCGAGAGATCCTCCGGAATCAAC CTGATCGCTTCAAGGACTATGCTGAGCTTACAATCCTCAAGATATTGGAGGCACACAGGGATCCACACAG TGAGGTTGTAAGACAGGCAGAGGAGACTTCAGCCACCCTGGCTATTTCCATTGCTCCTAGCCAGTGTGTC CGAGTCTTGTGTCCTATCATCCAGACAGCTGACTGCCCCATCAACCAGGCTGCCATCAAGATGTTAACCA AGGTTGTTGAACTGATGTCAGAAGCAGACGTACTGGAAATCTTACCCGAAGTGATTGTAGTTCTACTCAA GTCGTATGATCACACTGAGAGTAGTGTCCGAAAGGCCAGCGTCTTTTGCCTGGTGGCCATCTATAACATC ATAGGAGATAAACTCAAAGAGAAGCTAGCGGACCTACCAGGGAGTAAGATGAAGCTGTTGAACCTGTACA TTAAGCGTGCTCAAGCCGAGAAGGAAGCTCAGACACCCTCTCCCAGTAGTCCTTCAGCTTTATCCACTGG CAGCAGATAGTAGCCGTCCCAATATCAGACTGTACGCACTAACAAACACATGCCCCTGTGGATGGGACTG TTATTAGAGACCTGAGCAAGAACTCTGAATCGGTGCACCATCAGGATACATTTACATGCCATAAGTGTGT AATGAATTCAATAACCTGCAAGCACTCTTCTCAAGTAAATGTATCCGCAATTAGCTGACCCAGAATCAGA TTGTCACCCGCAGCACATATGGGAATCAATGGATGGGACTATTAGGAGAGAACTGATCAGGAATTCTCAC AGGTAGTGCAACATCCATGACTGTAGTATAGGCTGTTAAAGTGTGATCTACTCAGAATCCCATCAGTTCT CTCTTCTGGTAGTAGAGAGTAGTGGATCAAACTATGTTAACTAACACATACTCCTTAGGGTGGGACTGTT AAAAAGACATGATGAAGAACTCAGCTACTTAGTCTATTATGACACTGCACTATATTTATGTGTGTCTAGC AACATCTTTGAAAGCGACAGGGAATTCTCTACAGGTTTTCCTTCACTGTCCGAAGATCAGACTTTGTAAA CCATCACACTCGCACGCCTGCACCCAACTATGGATAAGACTATGGGCAGAAGTAAGGTGATTAGGGATTC ATGTGCCACTGCTTAACATGAGACTATGCGAGCTGTCTGTCAGGATCTCTTAATAATGCACATTCTAAAT CAATGATCTCATCAGGATTTCAACCTTTGTTTAGCTCCCTCTTAAGAAATTAATCAGCTCACCTGCTGAG AGCAAGAAGGTCACTAACTCTATGCAAGTGTATGTGATTAACTCCCTACTGGTTCTCAATAGAAAATCCC TATTTGTCAATGCCACTATTGGCCATTGTTGGAAATAATGTCAATATGTTCTTTATGAGAGGCATGTATA AGGCTACAAGTCATCCTTTCTAAAGGCTTTTAAGGTCACAACACTTTGGAAAAGTCATCAAAAGTTCCTG CAACAATGTAGCCAGGTGCATACTTGTCAGTATACATTGTACATGAACTTATGAAAATAGATCAATGCAG TTATGGATTACAGAAGATTAAGGCACCCTTCTATAAAAGTATTGAGTGCATGAGGTACATCTGTACTTAT GTAAGGTAATATTGCGCAAAAGATAGGACATTAGGTGGTATTGATTGAAACTTGCGACCCTTGGTGAGCA GTTGAATTTAGGTAGCTAACAACATTTTTGTATGAAATATTGAACCTCACTGCCATTTATGTCAAAGCTG TGGTGATTTGAGAACAATCTCTTAAGGGAAGATGAACTATAGTGTTATTGGCTGGCCAAAGTTTGATCAT TTGTATTCTTGATATTATCAAATATAAACTCATTATTCTTTCATTTTGATGACTTTTTTCTCAAGGAAAC TTTTAAAATTGACTAATATACTCAGATTGAATTAATATCATTCACAAATTGAAGATTCTAGAAGCAGTGT ACCAATTGAACACGAGAATTTAGATATTTGATAATAGTGAAAAAATTCCAATAGGATATACAAAAATATA TGACTCACAAATAAGGAGAGTGTTAGCGGGCAAGAAATTATCATTATTATTCATATTTACATAATGACAA ACACATATCTTTGGGAAAAGGGGCCTCCTTATTATATTTTGTATGAGAAAGTTGGCATCATTATTTGGGG GAATGAAAGAATTTTTGATTGATTTATTTGAGGGCCAAATCAGGAAATTGATAGAGCAATGGTTTTCAGT CCAATGTAGAATGGTTTTGAATAATGTTGAATTCTGGTCATTTGGTTTTGATGTTACACGTATCTGAAAT TAACATGTTTATGGTATAGACACCAGAAAGATAGATTGAAGGAAATATGTATATAATTGCACAACGAAGA ATGATTTGGGCACTTTTCGTCTGTTTGTTCACATACATAATGGTATTTTAGCAAGCCTTTGAAATGTCAA AATTGTATTTATTGTATGCTATGATAAAAAGTATAACAACTTGGCAAGGACACAATAAATGTCTATTTAA TCAAGAACAACTTCTTCATTCACCACTATCACAACCATTTGCCCAAATGGTATTGAAATCTGGATCAATT TAGCCAAAGAAAAACATGCAGCCCTTTTTGTCCCCTGCTCATATGTTTCAATGTGTATTGTTTATTTTGT ATTATCTCTTTTTGGTCAGGAGATTCATGGTATAAATTCTACATAGCTTATTTTTAATATGTGCCTTCAC GGTTTTTCATCTCAAAGCATCAATGGACATCTGCTTAGGATGGAAGTAAATTTTCACCTTCGCCGCGATC AGCAATTTTTTGTTGGATTTTTTGAGAATTATATGCATTGCATTAAACCTGTTGATATTCATCTCATGGT TATATTTGTTTTTATAAATAAAATCAAACAACATAAGAGAGGGTTTTAGAAAAATTCTAACAGAATCCAA CAAAAATCGCTGAATACTCATCTAAAACCCTCTCTGTGTTATTAGACTTTATGTATAAAATAAATATAAC
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???blast.eval.minus100???
???blast.numalign???
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???blast.numalign.1???
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???blast.numalign.100???
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???blast.matrix???
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???blast.matrix.blosum45???
???blast.matrix.blosum80???
???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds