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Echinobase
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Echinobase Accession
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Echinoderm mRNA
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S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
Genomes
Download Echinoderm Genomes
S. purpuratus
(Purple sea urchin) 5.0
L. variegatus
(Green sea urchin) 3.0
P. miniata
(Bat star) 3.0
A. planci
(Crown-of-thorns) 1.0
L. pictus
(Painted urchin) 3.0
A. rubens
(Sugar star) 1.3
A. japonica
(Feather star) 1.0
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BLAST Databases
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Download BLAST databases
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-- Genomes --
Strongylocentrotus purpuratus 5.0 Genome
Strongylocentrotus purpuratus 3.1 Genome
Lytechinus variegatus 3.0 Genome
Patiria miniata 3.0 Genome
Acanthaster planci 1.0 Genome
Lytechinus pictus 3.0 Genome
Lytechinus pictus 2.1 Genome
Asterias rubens 1.3 Genome
Anneissia japonica 1.0 Genome
-- mRNA --
Echinoderm mRNA
-- CDS --
Echinoderm CDS
-- Protein --
Echinoderm Protein
???blast.query???
>XM_030973443.1 PREDICTED: Strongylocentrotus purpuratus CLIP-associating protein 1 (LOC581599), transcript variant X15, mRNA TAATGACGTCACACATTTGAAATCGGTCAACATGGCGGTACTCTCGATACTAGTCAAAACACTAATGGCT AGCTACTAACGACGATTGCACTCGGCTTCCAATGAAAATATGCACGAAATTTGGAGCTTAACAAGAGGAT TGCATTCTACAGTGTTAACAAAGGAGGATTACATGTGAACACCCTGTTGTCTGAAGAGGGAAATACCTTC AAGTGCTGCTATTTTAGGTTTCGTTTATGATCATCAAACCGGAAGTCACACAGGAAGAGTATCAGTATAC GTCCATCTAATCTGAGAGAACATTAATAGTTCATAGCTGCTCAATAGTAGGAAGAAAATAGATCAGACAC TGCAGAGACAAGATACATATAAACCATGTAACAAAAAGGGTTTCCTGTCAAACAATTTCCAGACTACATG CATTTTATTCTTTGAGCTCATCGCCCTGCAGAGGAAATATCTATCCTGTAGTGCTGCAGGATTTTTTATA CTCGTGAATTTGCCTCCTTTGGAGGGGCCAGACTGTGGACATGGCAGGGAAGACGTTGGATGACATCTTC AATGATGTTCTGAAGCAGGACACTACGTCCAAGTTTCAGGCTTCAGAGGATTTGCAGAACTATCTCCAGG ACAATGAGAATTCTATGCATTGTGACAACATGGACAGATTGGTGGATGCCCTGGCAGGATGGGTCAATAG TAGCAATTTCAAGATATCCCTCTGTGGTCTTGAGTGTCTACTGCTGCTTGTCGATAGAATAGGAGAAAAA TTCAAGAATCATATAGGAACAGTTTTACCGGCAGCACTTGACAGATTGGGAGATAGCAAGGAGCAGGTTC GAGAACATTCTCAAGCTCTCATTCAAAAGCTGATGTCACCTGCTTCTGCACCACAGTTTGTATTTGAGAG GCTGATGAAAGGATTTTCGCACAAAGGCTGGCGTGTTCGAGAGGAAGTTCTACTATGTTTAATGCAGACG ATTAATGTATTTGGTGCTAATTCATTATTACTAAATAAAATAGTTCCATCAATATGCAAGCTTCTCGGGG ATCCCAACAGTCAAGTAAGAGACACAGCAATCAACACTCTAGTTGAGATATACAGACATGTAGGAGAGAA GGTTAGGATAGACCTGGGAAAAAAGGGCATTCCATCATCAAGGTTATCTATTATTTATGCCAAGTTTGAT GATGTGAAGCGGTCTGGACAAATGTTGGTGCAGCCTGAACAAAGTGCTCCTGCCAAACCATCAGCATCAC AAGATGAGACAGACAGTAAGCCTGCTGCTGCACAAAAAACTGCCCCTGCTAAGAGGCCTACCACATCCAC AACACAACGAAAGTCCATCAGTAGACCATCAACAGGCGCAAGCAGTGGTGCAGTGGATGAGGCTCTCTTT CAAGCTTCCTATGAAGATGTCCCTAGTGTCTCAATATTCACAACGAAACAGTTGGAGGATGACCTGAGTA AGATGTCTACTATTCTGAACAATGATAAAGCAGATTGGGAACTTAGAGTAACGGCATTGAAGAAATTACG GGCATTCATCATAGCTGGTGCTGCAGAGTACGAATGCTTTGGTCAATCACTCAGACAGATGGAAGAGGCC CTCATTATGTCCGTCAAGGATCTAAGGTCAACGGTCTTGAGAGAAGCTTGCATCACATTAGCGTTTTTGT CCATTCGTCTGAGGCGGCAGTTTGACCACGCAGCAGAGGCAGTCTTACCCCATTTGTTTACCCACATCCA GAATAGTGTAAAGATTATGGCAACATCAGGCATCGTTGCAATAGATGTTATCATTAGGCATACACATTCA CCTAGGCTTATATCTATTATGAAAAGCAACGCAACTTCTAAGTCAACTGCCATTAGGAAGCAAACATTTC AATACATTAACACGGTTTTGAATGTATGGGACACACATACATTGGAGAGGCATGCTAACCTACTCTCAGA GGCCATACACAAGGGTATTGAGGATGCTGATTCAGAAGCAAGGGCTATCTCAAGAAAAGCATTCTGGAAG TTCTCAGAGCACTTCAAGAGCCATGCCGACAAGTTGTTCAACAACCTGGATCCCTCCAAGCAGAAGATGC TACAAGGAGAGCTCAGCCAAGCCTCCAGCTGTACCTCTCTAGACGGCAGGCCGCTCTCACGCTCCGCCAC CGCCAGCTCGCATGAAAATCTAAGGACTGCCAGCTTGCCAAGGAGATCAGTAGCATCAAGGTCAAATCGA GCATCAGAGTCTTCTGCCACTCCAAGAGGGTCCTCTCTCCTTCAGACTCCTAACGGTCGTGCAGGGAGAA CACGATCTAGAATCGGGATTTCCCAATCACAACCTGGTAGCAGATCTAACAGTCGATCAAGCTCACCTTC GACAGTCTCCTCCAGATATTCCAACATCCAGACCAACGGCAGGACAAGAAGAAAGAGCGGTATCCCAGTG CCTCGCAGTCAGGGAGCAAGCAGAGAGGCCAGTCCTAGCAGATATGGATATGCTAGTGCACGAGAGAGGC GGCAGAGTGGATCATCTCTTGGTCCAGCCCAGAGGGAGCCTAAGGAGAAGCAGAACATCATGGCCCAGAG AGTCCTGGTCCCTGGTCAAGATGCTGAAGCTGCCCTAGCTGATGCTCTGATATCCGCCCAGAGAGCCCTC AGGAGCAACTATGGGTTCAGTTACGATTCCGATTACACCGACAATTTGGCCCAGAAGGTGATGCTAAAGA AGAGATATGATAATAACTTCTCCGACGATGAGAGCGATGCTTCCAGTGTGTGTTCTGTTGGATCGTATGG TTCGGGACCAGCAAAGATTATCGAGGATGTACCTGAAGTCCTAAATAAGATGGCAAGTCCTGCATGGTCA GAGAGGAAAGAAGGATTGATAGGTCTTCAGTACACCCTACATAGCAACAGAGCACTCAGTCGATCTGAAA TCAAGAGAGTGACAGAGTTATTCTCAAGGATGTTTGCTGACCCATCGAGCAAGACATTCAGCTTGTTTCT GGAGACCCTAGGGGAGTTCATCATTGTTCACAAAGCTGAGCTTCTAGATTGGTTATTTGTACTCATCACA AGGCTATTACAGAAGATGGGTTCTGATCTATTGGGTTCAGTTCTCAACAAGGTTCAAAGGACTCTAGAAA TTGTCAGAGAAAGCTTCCCATATGAGATCCAATTCAGGATACTAACCAAGTACATCATGGACCAGACACA AACACCAAACATGAAGACAAAGGTTGCGATGCTTCGATTCATGGAGAGCTTGACAGACGTAATGGATCCT GCAGACTTCAGCAACTCAGCGGAAACCAGGCTGGCTGTGTCCAGGATCATAGGATGGACCAAAGAGGCCA AGAGCCCTGAAGTCAGGAGGGCATCCCAAGCTGTGTTGATAGCTCTGTTTGAACTCAACACCCCAGAATT TAGCATGATGTTATCTGTACTACCCAAGACCTACCAGGAGGGGGCGACCAAGCTCTTGCGCAATGACCTG CGTATCGCATCCAGCATTGATGATGAGATTACTGCTCAGGAGTACAGGAGTAAGGCATCTCCACGGTCAG TCCTGAAAGCCTCCCCTCGATCAACAGGTTCCTCACCCCGTGGGAGCTATGCCAGCAATGGCCCTCCAGA CACCGAGTTCCTCAACTCTGAAGACATCTACGACTCACTGCGCCGAACCACCGCCGAGATTCAGAACTAT ATGCACAGCAGCCGCGACGACCTGGACCATGTGGCTGTCACCAAGGACACGCGGGTGGACAGTGATGAGG TATTGCCTGACCTGGTGCCAGGCATTAGAGTGGACAGTCCCGAGGGCAAGGTCAAGGAGTACCTGGAGTA CCGTATGGTATCTGACCCAGACTCCATGCTGTCACCCCCACCAATCACCCACAGTAGATCCTTCGGGGAC TACCGTTCAGTAAGCGGTGCACGCTCTCCCACCCCACAAAAAAAGTTCCATGCTGCCTCCTCCTCCTCCC AAGCCGAGTCCCGCAGCAAGGGCAGACCAAGACTGAAAATCCCTTCGGCTGACGGGCGGGGATCGCGCAC CCAATCCCCTGCTGCCCAGAACAGAGCTCGTGCACGCTCCTCATCCCCATCTCCTCCTGCTCTTGCTAAT CAATGTTTCACAGATTATGACTCCTCCTCTCCTACCCCACCTGTCTTCTCTCCAGATGCCCTCTCTGAAC CTGTCTATAATCCCCTCCCTATGCCCACCAATGCTTTGTATCGTGAGTCTGCTTCACCTGTCTCTTCTCG TAAAAACCCTCCTTCTTCCCGGGGCATAGCAGATACCATGGGTAGAATGACAGTGACCGACGGTAATTAC GAGGATGAGACTTTCCCCGAAGTAGATCACCAAGATATTCTGGTTCCTCTTTTGACTGAGCTGTCCAATC ATAATGGAAGGTTTGAAGAGAGAAAGAATGCAATGATGCAGCTAATCCGTCTCACCCGGTCTGAGAGCCT CTCGCTTTGGGATGATCACTTCAAGACGGTGCTCCTTCTTATGCTGGAGACATTAGGAGATGTAGAGTCA TCAATCCGAGCCATGGCACTGCGTGTCCTTCGAGAGATCCTCCGGAATCAACCTGATCGCTTCAAGGACT ATGCTGAGCTTACAATCCTCAAGATATTGGAGGCACACAGGGATCCACACAGTGAGGTTGTAAGACAGGC AGAGGAGACTTCAGCCACCCTGGCTATTTCCATTGCTCCTAGCCAGTGTGTCCGAGTCTTGTGTCCTATC ATCCAGACAGCTGACTGCCCCATCAACCAGGCTGCCATCAAGATGTTAACCAAGGTTGTTGAACTGATGT CAGAAGCAGACGTACTGGAAATCTTACCCGAAGTGATTGTAGTTCTACTCAAGTCGTATGATCACACTGA GAGTAGTGTCCGAAAGGCCAGCGTCTTTTGCCTGGTGGCCATCTATAACATCATAGGAGATAAACTCAAA GAGAAGCTAGCGGACCTACCAGGGAGTAAGATGAAGCTGTTGAACCTGTACATTAAGCGTGCTCAAGCCG AGAAGGAAGCTCAGACACCCTCTCCCAGTAGTCCTTCAGCTTTATCCACTGGCAGCAGATAGTAGCCGTC CCAATATCAGACTGTACGCACTAACAAACACATGCCCCTGTGGATGGGACTGTTATTAGAGACCTGAGCA AGAACTCTGAATCGGTGCACCATCAGGATACATTTACATGCCATAAGTGTGTAATGAATTCAATAACCTG CAAGCACTCTTCTCAAGTAAATGTATCCGCAATTAGCTGACCCAGAATCAGATTGTCACCCGCAGCACAT ATGGGAATCAATGGATGGGACTATTAGGAGAGAACTGATCAGGAATTCTCACAGGTAGTGCAACATCCAT GACTGTAGTATAGGCTGTTAAAGTGTGATCTACTCAGAATCCCATCAGTTCTCTCTTCTGGTAGTAGAGA GTAGTGGATCAAACTATGTTAACTAACACATACTCCTTAGGGTGGGACTGTTAAAAAGACATGATGAAGA ACTCAGCTACTTAGTCTATTATGACACTGCACTATATTTATGTGTGTCTAGCAACATCTTTGAAAGCGAC AGGGAATTCTCTACAGGTTTTCCTTCACTGTCCGAAGATCAGACTTTGTAAACCATCACACTCGCACGCC TGCACCCAACTATGGATAAGACTATGGGCAGAAGTAAGGTGATTAGGGATTCATGTGCCACTGCTTAACA TGAGACTATGCGAGCTGTCTGTCAGGATCTCTTAATAATGCACATTCTAAATCAATGATCTCATCAGGAT TTCAACCTTTGTTTAGCTCCCTCTTAAGAAATTAATCAGCTCACCTGCTGAGAGCAAGAAGGTCACTAAC TCTATGCAAGTGTATGTGATTAACTCCCTACTGGTTCTCAATAGAAAATCCCTATTTGTCAATGCCACTA TTGGCCATTGTTGGAAATAATGTCAATATGTTCTTTATGAGAGGCATGTATAAGGCTACAAGTCATCCTT TCTAAAGGCTTTTAAGGTCACAACACTTTGGAAAAGTCATCAAAAGTTCCTGCAACAATGTAGCCAGGTG CATACTTGTCAGTATACATTGTACATGAACTTATGAAAATAGATCAATGCAGTTATGGATTACAGAAGAT TAAGGCACCCTTCTATAAAAGTATTGAGTGCATGAGGTACATCTGTACTTATGTAAGGTAATATTGCGCA AAAGATAGGACATTAGGTGGTATTGATTGAAACTTGCGACCCTTGGTGAGCAGTTGAATTTAGGTAGCTA ACAACATTTTTGTATGAAATATTGAACCTCACTGCCATTTATGTCAAAGCTGTGGTGATTTGAGAACAAT CTCTTAAGGGAAGATGAACTATAGTGTTATTGGCTGGCCAAAGTTTGATCATTTGTATTCTTGATATTAT CAAATATAAACTCATTATTCTTTCATTTTGATGACTTTTTTCTCAAGGAAACTTTTAAAATTGACTAATA TACTCAGATTGAATTAATATCATTCACAAATTGAAGATTCTAGAAGCAGTGTACCAATTGAACACGAGAA TTTAGATATTTGATAATAGTGAAAAAATTCCAATAGGATATACAAAAATATATGACTCACAAATAAGGAG AGTGTTAGCGGGCAAGAAATTATCATTATTATTCATATTTACATAATGACAAACACATATCTTTGGGAAA AGGGGCCTCCTTATTATATTTTGTATGAGAAAGTTGGCATCATTATTTGGGGGAATGAAAGAATTTTTGA TTGATTTATTTGAGGGCCAAATCAGGAAATTGATAGAGCAATGGTTTTCAGTCCAATGTAGAATGGTTTT GAATAATGTTGAATTCTGGTCATTTGGTTTTGATGTTACACGTATCTGAAATTAACATGTTTATGGTATA GACACCAGAAAGATAGATTGAAGGAAATATGTATATAATTGCACAACGAAGAATGATTTGGGCACTTTTC GTCTGTTTGTTCACATACATAATGGTATTTTAGCAAGCCTTTGAAATGTCAAAATTGTATTTATTGTATG CTATGATAAAAAGTATAACAACTTGGCAAGGACACAATAAATGTCTATTTAATCAAGAACAACTTCTTCA TTCACCACTATCACAACCATTTGCCCAAATGGTATTGAAATCTGGATCAATTTAGCCAAAGAAAAACATG CAGCCCTTTTTGTCCCCTGCTCATATGTTTCAATGTGTATTGTTTATTTTGTATTATCTCTTTTTGGTCA GGAGATTCATGGTATAAATTCTACATAGCTTATTTTTAATATGTGCCTTCACGGTTTTTCATCTCAAAGC ATCAATGGACATCTGCTTAGGATGGAAGTAAATTTTCACCTTCGCCGCGATCAGCAATTTTTTGTTGGAT TTTTTGAGAATTATATGCATTGCATTAAACCTGTTGATATTCATCTCATGGTTATATTTGTTTTTATAAA TAAAATCAAACAACATAAGAGAGGGTTTTAGAAAAATTCTAACAGAATCCAACAAAAATCGCTGAATACT CATCTAAAACCCTCTCTGTGTTATTAGACTTTATGTATAAAATAAATATAAC
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???blast.matrix???
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???blast.matrix.pam30???
???blast.matrix.pam70???
???blast.gapedalgin???
???blast.true???
???blast.false???
Automatically set to False for sequences longer than 4500 bytes
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BLAST time is limited to 30 seconds